CK939407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_SPHAL (NADH-quinone oxidoreductase subunit H OS=Sphingopyxis alaskensis GN=nuoH PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.563e-29 Identity = 67/170 (39.41%), Postives = 103/170 (60.59%), Query Frame = 3 Query: 123 ESLQEVYGILWVLAPIS---IYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 +SL Y W LA ++ + L + + V +I++ +R+I A I R GP P G+LQ+ ADG K+ +E ++PS N LF I P I LL++ VIPF+ VLAD+N+G+ +AISS+ G+++SG+ SN+KY F LRA+AQ ISYE+ + ++ + L Sbjct: 6 QSLGMSYEWAWGLATVAGILLIALPLMLAVAMIIYADRKIWAAIALRRGPNVVGPFGLLQSFADGLKVFLQETIIPSGANRGLFLIAPIITFTVALLAWAVIPFNSGAVLADINVGLLYILAISSLGVYGVILSGWASNSKYPFFSALRASAQMISYEVSIGFILIGVVL 175
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_PETHY (NADH-ubiquinone oxidoreductase chain 1 OS=Petunia hybrida GN=ND1 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.563e-29 Identity = 64/162 (39.51%), Postives = 104/162 (64.20%), Query Frame = 3 Query: 150 LWVLAPISIY--VLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV 629 +++ P I +L + +GV +V ER++ A +Q+R GP+ G+LQ LADG KL+ KE + PS N SLF + P + L++ V+PF Y +VL+D NIG+ AISS+ G++++G+ SN+KY+FLG LR+AAQ + YE+ + L ++++ + V Sbjct: 1 MYIAVPAEILGIILPLLLGVAFLVLAERKVMAFVQRRKGPDVVGSFGLLQPLADGLKLILKEPISPSSANFSLFRMAPVATFMLSLVARAVVPFDYGMVLSDPNIGLLYLFAISSLGVYGIIIAGWSSNSKYAFLGALRSAAQMVPYEVSIGLILITVLICV 162
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_NEUCR (NADH-ubiquinone oxidoreductase chain 1 OS=Neurospora crassa GN=ND1 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.563e-29 Identity = 68/157 (43.31%), Postives = 103/157 (65.61%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +L VL P + V +T+ ER+ A +Q+R+GP LG+LQA AD KLL KE + ++ N +LF +GP I +I LL Y VIP+ +LV+ D+N+GI +A+SS+A G+L++G+ +N+KY+FLG LR+AAQ ISYE+ L+ +L + Sbjct: 13 VLLVLVPSLLAVAYVTVA-------ERKTMASMQRRLGPNAVGYLGLLQAFADALKLLLKEYVALTQANMTLFFLGPVITLIFSLLGYAVIPYGPSLVIQDVNLGILYMLAVSSLATYGILLAGWSANSKYAFLGSLRSAAQLISYELVLSSAILLV 162
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_MAGSM (NADH-quinone oxidoreductase subunit H OS=Magnetococcus sp. (strain MC-1) GN=nuoH PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.041e-29 Identity = 61/162 (37.65%), Postives = 101/162 (62.35%), Query Frame = 3 Query: 132 QEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 + ++ ++W + I++ + I V + ER + +Q R+GP GILQ LAD KL KE +LP++ + ++F + P + L+S+ V+PFS LVLAD+N+G+ +A+SS+ G+L+SG+ SN +YS LGGLR+AAQ ISYE+ + ++ + Sbjct: 18 ETLWTLVWTILKIAVLIAPILFCVTYLTLAERRLIGFMQVRLGPNRVGVFGILQPLADAVKLFVKETMLPAKAHRTMFILAPILTFSTALVSWAVVPFSPELVLADVNVGVLFILAMSSLGAYGVLLSGWASNTRYSLLGGLRSAAQMISYEVSMGFTLVPV 179
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_CHOCR (NADH-ubiquinone oxidoreductase chain 1 OS=Chondrus crispus GN=ND1 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.041e-29 Identity = 64/159 (40.25%), Postives = 100/159 (62.89%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 +L +L I +L + + V + ER++ A IQ+R GP G+LQ LADG KL KE +LPS N +F + P + + L+S+ VIP +V +D+NIG+ +AISS+ G++ SG+ SN+KY+FLG LR+AAQ +SYE+ + L ++++ L Sbjct: 3 LLSLLIKIITIILPLLVAVAYMTLAERKVMAAIQRRKGPNIVGVFGLLQPLADGLKLFVKETILPSSANIIIFILAPILTFLLALVSWCVIPLGEGMVYSDINIGVLYILAISSLGVYGIITSGWASNSKYAFLGALRSAAQMVSYEVSIGLILINVLL 161
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_RHOCS (NADH-quinone oxidoreductase subunit H OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=nuoH PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.666e-29 Identity = 62/158 (39.24%), Postives = 103/158 (65.19%), Query Frame = 3 Query: 156 VLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV 629 ++A I ++ I + V +V+ ER++ +Q R GP P GILQ+ AD K++ KE ++P+ N +F P + ++ L ++ VIPF LV++D+N+GI +AISS G++M+G+ SN+KY+FLGGLR+AAQ +SYE+ + L ++++ L V Sbjct: 15 IVAQILALMVPILVSVAFLVYAERKVLGLMQLRQGPNMVGPWGILQSFADALKMIGKETIIPAGANRIIFLAAPMLTMMLALAAWAVIPFGEGLVISDINVGILYLLAISSQGVYGIIMAGWASNSKYAFLGGLRSAAQMVSYEVSIGLVIITVLLCV 172
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_SALRD (NADH-quinone oxidoreductase subunit H OS=Salinibacter ruber (strain DSM 13855) GN=nuoH PE=3 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 3.482e-29 Identity = 60/159 (37.74%), Postives = 105/159 (66.04%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++W + + A+ + ++V+ ER +SA IQ R GP PLG+LQ AD K + KE++ P++ N + S+ P + V+ + + +IPF+ +V+ADLN+G+ + +A++SI+ G+ ++G+ SN+K+S LGGLR+AAQ +SYE+ + L V+S+ L Sbjct: 5 MVWTALGAFLVINAMLLSASLLVFAERRVSAFIQNRPGPNRVGPLGLLQPFADVLKFVLKEDVQPAQSNKFIHSMAPVVMVVIAMTTASLIPFAEGVVVADLNVGVIMLLALTSISVYGVTLAGWSSNSKFSLLGGLRSAAQMVSYELSMGLAVISVVL 163
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_AZOSB (NADH-quinone oxidoreductase subunit H OS=Azoarcus sp. (strain BH72) GN=nuoH PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.482e-29 Identity = 66/174 (37.93%), Postives = 108/174 (62.07%), Query Frame = 3 Query: 120 LESLQEVYG----ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPL---TLCVLSIS 620 L+ + +++G ++W L I V + V + ER++ +Q RIGP P G+LQ +ADG KLL KE + PS + LF +GP +A+ L+++ V+PF LVLA++N G+ +A++S+ G++++G+ SN+KY F+G +RAAAQ +SYE+ + +CVL IS Sbjct: 5 LQPVADLFGPSWPVVWTLLKIVAIVAPLMGCVAYLTLAERKVIGYMQVRIGPNRVGPFGLLQPIADGVKLLLKEIIFPSSASKGLFIVGPILALAPSLVAWAVVPFDDGLVLANVNAGLLFLLAVTSMEVYGVIVAGWASNSKYPFIGAMRAAAQMVSYEVSMGFALICVLLIS 178
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NQO8_RHOMR (NADH-quinone oxidoreductase subunit 8 OS=Rhodothermus marinus GN=nqo8 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.482e-29 Identity = 62/160 (38.75%), Postives = 104/160 (65.00%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLR 626 + W + + A+ + V+V+ ER+IS IQ R+GP P G LQ AD KLLFKE+++P++ N + ++ P+I V + +IPF+ +V+AD+++G+ +A++SI+ G+ ++G+ SN+KYS LGGLR++AQ ISYE+ + VLS+ L+ Sbjct: 5 LYWTALIAFLIINAMLLTASVLVYAERKISGFIQHRLGPNRVGPAGFLQPFADVVKLLFKEDIIPAQANRFIHALAPTIMVTIAMTVPALIPFARGVVIADIDVGVLAILALTSISVYGITLAGWSSNSKYSLLGGLRSSAQMISYELAMGTAVLSVILQ 164
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_ERYLH (NADH-quinone oxidoreductase subunit H OS=Erythrobacter litoralis (strain HTCC2594) GN=nuoH PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.756e-29 Identity = 56/155 (36.13%), Postives = 98/155 (63.23%), Query Frame = 3 Query: 159 LAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 +A I + L + + V ++++++R++ I R GP P G+LQ+ ADG K+ +E ++PS N +F + P + + L+++ VIPF +VLAD+N+G+ +AISS+ G++M+G+ SN+KY F +RAAAQ ISYE+ + ++ + L Sbjct: 21 IAGILLIALPVMLAVAMVIYVDRKVLGAIMLRRGPNVVGPFGLLQSFADGLKVFLQETIIPSAANKGIFLLAPIVTFVVALVAWAVIPFGDGMVLADINVGLLYVLAISSLGVYGIVMAGWASNSKYPFFSAMRAAAQMISYEVSIGFILICVVL 175 The following BLAST results are available for this feature:
BLAST of CK939407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939407 ID=CK939407; Name=CK939407; organism=Citrus sinensis; type=EST; length=887bpback to top |