CK939407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_DESHY (NADH-quinone oxidoreductase subunit H OS=Desulfitobacterium hafniense (strain Y51) GN=nuoH PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.756e-29 Identity = 62/148 (41.89%), Postives = 93/148 (62.84%), Query Frame = 3 Query: 174 IYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 + ++ I I L+++ LER+I+ QR GP P G Q +AD KLL KE+L P+ + +F I P +L+ +IPF Y + + DL +G+F ++ I+S++ + LLM+G+ SNNKYS LGG+RA AQ ISYEIPL +L + Sbjct: 41 LIIVVIVISALLLIVLERKIAGWGSQRPGPNRLGPRGWFQTIADALKLLGKEDLTPANADRIMFKIAPMFIFGIPILTLTIIPFGYAMTVIDLELGVFFYLGITSVSTLALLMAGWSSNNKYSLLGGMRAVAQMISYEIPLIFSLLGV 188
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH1_ACIBL (NADH-quinone oxidoreductase subunit H 1 OS=Acidobacteria bacterium (strain Ellin345) GN=nuoH1 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.756e-29 Identity = 59/156 (37.82%), Postives = 100/156 (64.10%), Query Frame = 3 Query: 150 LWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 LW I + ++ V+++ +LER++ A +Q R+GP P G+LQ +AD KLL KE+++P + LF + P ++ +YLVIPF + + D+NIG+ I ISS+ + ++M+G+ SN+KY+ +GGLR+AAQ +SYE+ + L ++S+ Sbjct: 22 LWATVYILVIFGVASVAVMLMTYLERKVLAHMQIRLGPMRVGPHGLLQPIADALKLLIKEDIVPDGADKFLFWMAPVTVMMTAFTTYLVIPFGRSHAVTDMNIGVLFMIGISSLGVLAVVMAGWSSNSKYALMGGLRSAAQMVSYEVAMGLAIVSV 177
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_VEREI (NADH-quinone oxidoreductase subunit H OS=Verminephrobacter eiseniae (strain EF01-2) GN=nuoH PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.013e-28 Identity = 63/160 (39.38%), Postives = 104/160 (65.00%), Query Frame = 3 Query: 138 VYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 V+ +LW+L I ++ + V + ER++ +Q R GP P G+LQ +AD KLL KE + P+ + LF +GP +A++ L +++VIPF ++ LA++N G+ L +AI+SI G++++G+ SN+KY+FLG LRA+AQ +SYEI + C+L + Sbjct: 22 VWPVLWILLKIVALLIPLMGAVAYLTLWERKLLGFMQVRHGPNRVGPWGLLQPIADALKLLTKEIIQPTAASRGLFVLGPVMAIMPALAAWVVIPFGPDVALANVNAGLLLVMAITSIEVYGVIIAGWASNSKYAFLGALRASAQMVSYEIAMGFCLLIV 181
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH1_SYNFM (NADH-quinone oxidoreductase subunit H 1 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=nuoH1 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.013e-28 Identity = 62/164 (37.80%), Postives = 99/164 (60.37%), Query Frame = 3 Query: 144 GILWVLAPISIYVLAI--TIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV 629 G WV + + ++ + L +VWLER+++ IQ R GP P G+LQ + DG KL+ KE + P + LF + P + + +L+ +LV+PF L+L D+N+GI L + S+ + +L G+ SNNKY+ LG +R+ Q+++YEIPL L V+S+ L V Sbjct: 6 GTEWVRLIVGLVIILAFSQLNALFLVWLERKVAGRIQLRPGPMEVGPHGLLQTIMDGIKLVGKELITPRSVDRKLFILAPVLVFMPVLVGFLVLPFGPGLILRDMNVGILLIFSFSTFTVLAILAGGWASNNKYALLGAIRSVGQNVAYEIPLLLTVMSVVLMV 169
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_ACIAC (NADH-quinone oxidoreductase subunit H OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=nuoH PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.323e-28 Identity = 65/160 (40.62%), Postives = 101/160 (63.12%), Query Frame = 3 Query: 138 VYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 V+ +LW L I V + V + ER++ +Q R GP P G+LQ LADG KLL KE + P+ + LF +GP +A++ L +++ IPF ++ LA++N G+ L +AI+SI G++++G+ SN+KY+FLG LRA+AQ +SYEI + C L + Sbjct: 22 VWPVLWNLLKIVAIVAPLMGAVAYLTLWERKLLGFMQVRHGPNRVGPFGLLQPLADGLKLLTKEIIQPAAASKGLFVLGPVMAIMPALAAWVAIPFGPDVALANVNAGLLLIMAITSIEVYGVIIAGWASNSKYAFLGALRASAQMVSYEIAMGFCFLVV 181
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH1_NITOC (NADH-quinone oxidoreductase subunit H 1 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=nuoH1 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.323e-28 Identity = 67/166 (40.36%), Postives = 105/166 (63.25%), Query Frame = 3 Query: 120 LESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 L SL ++GIL L +T+ L+I W+ER + Q+R GP P GILQ +AD KLL KE+ +P + +F + P++ VIA LL++ VIPF+ + + DLNIG+ ++A+SS++ +++ G+ SNNKYS +G LRAAAQ +SYE+ + L ++ + Sbjct: 5 LTSLFNIFGILGTL---------LTLAALLI-WIERRLLGFWQERYGPNRVGPFGILQVVADAIKLLTKEDWVPPFADKLVFILAPTVVVIATLLAFAVIPFTPYIGIIDLNIGLLFFLAMSSLSVYSVVLGGWASNNKYSLMGALRAAAQMLSYEVFMGLSLMGV 160
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH2_CYTH3 (NADH-quinone oxidoreductase subunit H 2 OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=nuoH2 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.728e-28 Identity = 64/162 (39.51%), Postives = 102/162 (62.96%), Query Frame = 3 Query: 138 VYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++ +L+VL I +Y + +VW ER+++A IQ R+GP P G+LQ +AD KLL KE+++ + N LF + P + AI + +PF+ +L+ + ++G+F I I S+ +G+ ++G+ SNNK+S LG RA AQ ISYEIPLTL +L++ L Sbjct: 1 MFVVLFVLTLILLYAV-------FVVWAERKVAAFIQDRLGPMEVGPYGMLQTIADLIKLLQKEDIIATGANRFLFRLAPVLIFTAIFAGFATLPFAPDLIGSKADVGVFFMITIVSLDVVGIFLAGWASNNKFSILGAFRAIAQVISYEIPLTLSILAVVL 155
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_RHOCA (NADH-quinone oxidoreductase subunit H OS=Rhodobacter capsulatus GN=nuoH PE=1 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.947e-28 Identity = 55/143 (38.46%), Postives = 98/143 (68.53%), Query Frame = 3 Query: 189 ITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 + IG+L++VW +R+I A +Q R GP G+LQ++AD K +FKE ++P+ + ++ + P ++++ LL+++V+PF+ V+AD+N+ + A+SS+ G++M G+ SN+KY FLG LR+AAQ ISYE+ + L ++ + Sbjct: 26 VMIGLLLLVWGDRKIWAAVQMRKGPNVVGAFGLLQSVADAAKYVFKEIVVPAGVDKPVYFLAPMLSLVLALLAWVVVPFNEGWVMADINVAVLFVFAVSSLEVYGVIMGGWASNSKYPFLGSLRSAAQMISYEVSMGLIIVGV 168
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_POLNA (NADH-quinone oxidoreductase subunit H OS=Polaromonas naphthalenivorans (strain CJ2) GN=nuoH PE=3 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 2.947e-28 Identity = 64/161 (39.75%), Postives = 106/161 (65.84%), Query Frame = 3 Query: 138 VYGILWVLAPISIYVLAITIGVLVIVWL-EREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 V+ +LWVL I + VLA +G + + L ER+ Q R+GP P G+LQ +AD KLL KE ++P+ + LF +GP + ++ L ++ VIPF ++ LA++N G+ +AI+S+ G++++G+GSN+KY+FLG +RA+AQ +SYEI + C++ + Sbjct: 21 VWPVLWVLIKI-VAVLAPLMGCVAYLTLWERKAIGFTQVRVGPNRIGPFGLLQPIADALKLLTKEIIIPTAASKGLFILGPIMTIMPALAAWAVIPFGPDVALANVNAGLLFIMAITSLEVYGVIIAGWGSNSKYAFLGAMRASAQMVSYEIAMGFCLVVV 180
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_ORITI (NADH-quinone oxidoreductase subunit H OS=Orientia tsutsugamushi (strain Ikeda) GN=nuoH PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 5.028e-28 Identity = 62/155 (40.00%), Postives = 108/155 (69.68%), Query Frame = 3 Query: 168 ISIYVLAITIGVLV----IVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWI-AISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +SI V+A+ I +L+ + + ER++ A +Q R+GP A P G+LQ +AD KL+FKE ++P++ + LF I P I + LL + VIP +++VL+ ++IG L+I A++S+ G++++G+ SN+KY+FLG +R+AAQ ISYE+ + L ++++ Sbjct: 24 VSIKVIALIICLLLATAYLTFAERKVIAYMQLRVGPSLAGPFGLLQPIADAVKLVFKEPIIPAKADRKLFIIAPIITFVLSLLGWSVIPIDHDIVLSRIHIGGILFILAVTSLGVYGIIIAGWASNSKYAFLGAVRSAAQMISYELAMALSIVAV 178 The following BLAST results are available for this feature:
BLAST of CK939407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939407 ID=CK939407; Name=CK939407; organism=Citrus sinensis; type=EST; length=887bpback to top |