CK939407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_NOVAD (NADH-quinone oxidoreductase subunit H OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=nuoH PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 5.028e-28 Identity = 59/155 (38.06%), Postives = 99/155 (63.87%), Query Frame = 3 Query: 159 LAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 +A I + L + +GV +I++ +R+I A + R GP PLG+LQ+ ADG K+ +E ++P+ N LF I P I L+++ VIPF+ VLA++N+G+ +AISS+ G++++G+ SN+KY F +RA+AQ ISYE+ + ++ + L Sbjct: 21 IAGILLIALPLMLGVAMIIYADRKIWAAMALRRGPNVVGPLGLLQSFADGLKVFLQETIIPTAANKGLFLIAPIITFTVALMAWAVIPFNSGAVLANINVGLLYVLAISSLGVYGVVIAGWSSNSKYPFFSAMRASAQMISYEVSIGFILICVVL 175
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_CYACA (NADH-ubiquinone oxidoreductase chain 1 OS=Cyanidium caldarium GN=ND1 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 5.028e-28 Identity = 61/149 (40.94%), Postives = 96/149 (64.43%), Query Frame = 3 Query: 177 YVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 Y++ + I + + +ER+I IQ+R GP G+LQ +ADG KLL KE LP+ N +F I P + L ++ ++PF+ ++LNIGI +AISS+ G+++SG+ SN+KY+FLGGLR+AAQ ISYE+ + L ++++ L Sbjct: 30 YIIPLIIAIAYLTLIERKIIGSIQKRKGPNIVGIFGLLQPIADGLKLLLKETSLPNSANIFIFIIAPILTFFLALCAWAIMPFNEINFYSNLNIGILYLLAISSLGVYGIIISGWASNSKYAFLGGLRSAAQIISYEVSIGLIIINVLL 178
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_ORITB (NADH-quinone oxidoreductase subunit H OS=Orientia tsutsugamushi (strain Boryong) GN=nuoH PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.566e-28 Identity = 62/155 (40.00%), Postives = 108/155 (69.68%), Query Frame = 3 Query: 168 ISIYVLAITIGVLV----IVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWI-AISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +SI V+A+ I +L+ + + ER++ A +Q R+GP A P G+LQ +AD KL+FKE ++P++ + LF I P I + LL + VIP +++VL+ ++IG L+I A++S+ G++++G+ SN+KY+FLG +R+AAQ ISYE+ + L ++++ Sbjct: 24 VSIKVIALIICLLLATAYLTFAERKVIAYMQLRVGPSLAGPFGLLQPIADAIKLVFKEPIIPAKADRKLFIIAPIITFVLSLLGWSVIPIDHDIVLSRIHIGGILFILAVTSLGVYGIIIAGWASNSKYAFLGAVRSAAQMISYELAMALSIVAV 178
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_MESSB (NADH-quinone oxidoreductase subunit H OS=Mesorhizobium sp. (strain BNC1) GN=nuoH PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.576e-28 Identity = 65/173 (37.57%), Postives = 108/173 (62.43%), Query Frame = 3 Query: 120 LESLQEVY---GILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV 629 +ES +Y G+L +L +++ V+ + +GV I++ +R+I A +Q R GP P G+ QA AD K +FKE ++PS N +F + P +A L ++ VIP S +A++N+GI AI+S+ G++M+G+ SN+KY FLG LR+AAQ +SYE+ + ++++ L V Sbjct: 1 MESFVTLYVLPGLLILLKSVALIVILL-VGVAYILYADRKIWAAVQLRRGPNVVGPWGLFQAFADLFKFVFKEPVIPSGANKGVFLLAPVVAAGLALAAWAVIPVSEGWAIANINVGILYVFAIASLEVYGVIMAGWASNSKYPFLGALRSAAQMVSYEVSIGFVIVTVLLAV 172
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_LEGPH (NADH-quinone oxidoreductase subunit H OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=nuoH PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.576e-28 Identity = 60/159 (37.74%), Postives = 99/159 (62.26%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++W++ I + V+ + I V + + ER++ IQ RIGP G+LQ AD KL+ KE ++P+R N LF I P A++ L+ + VIPF +VLA++N G+ A+SS+ G+L++G+ SN+KY+ G LR+ AQ++SYEI + ++ + L Sbjct: 8 LIWIIIKILVIVVPLLISVAYLTYAERKVIGYIQVRIGPNRVGLKGLLQPFADLLKLITKEIIVPTRSNKYLFVIAPLFALVPSLVGWAVIPFQEGIVLANINAGVLYLFAMSSLGVYGVLIAGWASNSKYAMFGALRSTAQTVSYEIAMGFALVGVLL 166
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_HYPNA (NADH-quinone oxidoreductase subunit H OS=Hyphomonas neptunium (strain ATCC 15444) GN=nuoH PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.576e-28 Identity = 61/176 (34.66%), Postives = 106/176 (60.23%), Query Frame = 3 Query: 120 LESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFS------YNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV 629 +ESL ++G L VL I ++ L + + + ++ L+R++ AG+ R GP P G+LQ+ AD K L KE ++P+ N ++F + P + +++ IP + + V+A+LN+G+ AISS+ G++M G+ SN+KY FLG LR+AAQ +SYE+ + ++++ L V Sbjct: 5 IESLGSLWGPLLVLGQIGLFTLVLLLSIAFLLLLDRKVWAGVMMRKGPNVVGPFGLLQSFADFGKFLLKEIVIPAGANKAVFILAPILTCTLAFVTWAAIPVAPGTATGTSWVIANLNVGVLYLFAISSLGVYGIIMGGWASNSKYPFLGALRSAAQMVSYEVSIGFVIVTVILLV 180
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_ACISJ (NADH-quinone oxidoreductase subunit H OS=Acidovorax sp. (strain JS42) GN=nuoH PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.576e-28 Identity = 64/157 (40.76%), Postives = 98/157 (62.42%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 ++W L I VL + V + ER++ +Q R GP P G+LQ +AD KLL KE + P+ LF +GP +A++ L ++ VIPF +L LA++N G+ L +AI+SI G++++G+ SN+KY+FLG LRA+AQ +SYEI + C L + Sbjct: 25 VIWNLIKIICVVLPLLGAVAYLTLWERKLLGFMQVRFGPNRVGPFGLLQPIADALKLLTKELIQPAAAAKGLFYLGPVMAIMPALGAWAVIPFGPDLALANVNAGLLLVMAITSIEVYGVIIAGWASNSKYAFLGALRASAQMVSYEIAMGFCFLVV 181
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_RUBXD (NADH-quinone oxidoreductase subunit H OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=nuoH PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.120e-27 Identity = 65/158 (41.14%), Postives = 95/158 (60.13%), Query Frame = 3 Query: 153 WVLAPISIYVLAITIGVLVIVWL-EREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 W S V+ + + + ++ L ER++SA IQ R GP P G+LQ AD KL KEN+ P R + +F P + +LVIPF +V+ADLNIG+ + AI+SI +G++M+GYGS + +S LG LR A Q ISYE+PL L +L +++ Sbjct: 11 WRFLISSATVIFLVLNIAAVLTLAERKVSAYIQLRYGPNRVGPRGLLQPAADVVKLFIKENVSPGRADRWVFLAAPIAMFLPAAAVWLVIPFGPGMVVADLNIGLVYFFAITSIGALGVIMAGYGSRSNFSLLGALRGAGQMISYEVPLILSLLGVAM 168
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_LEGPL (NADH-quinone oxidoreductase subunit H OS=Legionella pneumophila (strain Lens) GN=nuoH PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.120e-27 Identity = 60/159 (37.74%), Postives = 99/159 (62.26%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++W++ I + V+ + I V + + ER++ IQ RIGP G+LQ AD KL+ KE ++P+R N LF I P A++ L+ + VIPF +VLA++N G+ A+SS+ G+L++G+ SN+KY+ G LR+ AQ++SYEI + ++ + L Sbjct: 8 LIWIIIKIIVIVVPLLISVAYLTYAERKVIGYIQVRIGPNRVGLKGLLQPFADLLKLITKEIIVPTRSNKYLFVIAPLFALVPSLVGWAVIPFQEGVVLANINAGVLYLFAMSSLGVYGVLIAGWASNSKYAMFGALRSTAQTVSYEIAMGFALVGVLL 166
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_LEGPC (NADH-quinone oxidoreductase subunit H OS=Legionella pneumophila (strain Corby) GN=nuoH PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.120e-27 Identity = 60/159 (37.74%), Postives = 99/159 (62.26%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++W++ I + V+ + I V + + ER++ IQ RIGP G+LQ AD KL+ KE ++P+R N LF I P A++ L+ + VIPF +VLA++N G+ A+SS+ G+L++G+ SN+KY+ G LR+ AQ++SYEI + ++ + L Sbjct: 8 LIWIIIKILVIVVPLLISVAYLTYAERKVIGYIQVRIGPNRVGLKGLLQPFADLLKLITKEIIVPTRSNKYLFVIAPLFALVPSLVGWAVIPFQEGVVLANINAGVLYLFAMSSLGVYGVLIAGWASNSKYAMFGALRSTAQTVSYEIAMGFALVGVLL 166 The following BLAST results are available for this feature:
BLAST of CK939407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939407 ID=CK939407; Name=CK939407; organism=Citrus sinensis; type=EST; length=887bpback to top |