CK939407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_METCA (NADH-quinone oxidoreductase subunit H OS=Methylococcus capsulatus GN=nuoH PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.463e-27 Identity = 60/152 (39.47%), Postives = 96/152 (63.16%), Query Frame = 3 Query: 186 AITIGVLV--------IVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 A+ IG+L+ ++W+ER + Q R+GP PLG+ Q +AD K+ FKE+ +P + +F I P+I ++ +LL ++V+PF+ + + D N G+ + A+SS+A +++GY SNNKYS LG LRAAAQSISYE+ + L + + Sbjct: 7 AVVIGILLSTVIVAAWLIWVERRMIGIWQDRLGPNRVGPLGLGQVVADMVKIFFKEDWIPPFADKPVFVIAPAIVMVTMLLGFVVVPFAPGVGVIDFNFGLLYFFALSSLAVYSQVLAGYASNNKYSLLGSLRAAAQSISYEVFMGLAAMGV 158
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_HALHL (NADH-quinone oxidoreductase subunit H OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=nuoH PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.463e-27 Identity = 59/157 (37.58%), Postives = 99/157 (63.06%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 + W A I ++ + + V ++ER + +Q R GP P G+LQ +AD KLLFKE +P+ + +LF I P++A++ L ++ VIPF LV+AD+N G+ +A++S+ GL+++G+ SN+KY+ LG LRA+AQ +SYEI + ++ + Sbjct: 5 LFWQFAKIWAVLIPLFLAVAYFTYVERRVIGHMQDRRGPNRVGPRGLLQPIADALKLLFKEITIPTYASRTLFLIAPAMAIMPALAAWAVIPFDDGLVVADINAGLLYILAMTSLGVYGLIIAGWASNSKYALLGTLRASAQVVSYEIAMGFALVGV 161
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_ANADE (NADH-quinone oxidoreductase subunit H OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=nuoH PE=3 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 1.463e-27 Identity = 59/157 (37.58%), Postives = 98/157 (62.42%), Query Frame = 3 Query: 150 LWVLAPISIYVLAITIGVLV---IVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 611 LW++A + ++ ++ G ++ VW E +SA +Q RIG G Q +AD KLL KE+L+P+ + LF P ++ L ++ +PF +L+ ADLN+GIF A++++ +G+L++G+ SN+K++ GG+R+AAQ ISYEIP L V+ Sbjct: 24 LWLVAMAVLALILVSFGAVISGMTVWWEMRVSARMQSRIGYNRVGAAGFFQWIADAVKLLLKEDLIPADADRLLFRAAPYFVLVGFALVFVALPFGESLIAADLNVGIFYITAVTALVVVGILVAGWSSNSKWALFGGMRSAAQVISYEIPAGLAVM 180
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH2_NITOC (NADH-quinone oxidoreductase subunit H 2 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=nuoH2 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.463e-27 Identity = 65/160 (40.62%), Postives = 101/160 (63.12%), Query Frame = 3 Query: 150 LWVLAPISIYVLAITIG-VLVIVWL---EREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 L V PI ++AI + +L++ WL ER+I +Q RIGP P G LQ +AD KLL KE ++P+ N LF + P +A+ L + VIPF +LVLAD+N + +AI S++ G++++G+ SN+KY+FLG +R+AAQ +SYEI + ++ + Sbjct: 9 LQVTLPILFKIVAIVLPLILIVAWLTFAERKIIGYMQGRIGPNRVGPRGWLQPIADTVKLLLKEIIIPASANRILFLLAPVLAIAPALAVWAVIPFDAHLVLADINAALLYILAIGSMSVYGIILAGWASNSKYAFLGAMRSAAQVVSYEIAMGFALVGV 168
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_NEIMF (NADH-quinone oxidoreductase subunit H OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=nuoH PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.910e-27 Identity = 62/161 (38.51%), Postives = 104/161 (64.60%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLT---LCVLSIS 620 ++ V+ I I ++ + + V + + ER++ +Q R+GP P G++Q AD KLLFKE P N +LF IGP +++ ++ VIPF+ VL ++NIG+ + I+S++ G++++G+ SN+KYSFLG +RA+AQSISYEI ++ +CV+ +S Sbjct: 27 VVSVIVKIVIILIPLILTVAYLTYFERKVIGFMQLRVGPNVTGPWGLIQPFADVFKLLFKEVTRPKLSNKALFYIGPIMSLAPSFAAWAVIPFNEEWVLTNINIGLLYILMITSLSVYGVIIAGWASNSKYSFLGAMRASAQSISYEIAMSAALVCVVMVS 187
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_NEIMB (NADH-quinone oxidoreductase subunit H OS=Neisseria meningitidis serogroup B GN=nuoH PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.910e-27 Identity = 62/161 (38.51%), Postives = 104/161 (64.60%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLT---LCVLSIS 620 ++ V+ I I ++ + + V + + ER++ +Q R+GP P G++Q AD KLLFKE P N +LF IGP +++ ++ VIPF+ VL ++NIG+ + I+S++ G++++G+ SN+KYSFLG +RA+AQSISYEI ++ +CV+ +S Sbjct: 25 VVSVIVKIVIILIPLILTVAYLTYFERKVIGFMQLRVGPNVTGPWGLIQPFADVFKLLFKEVTRPKLSNKALFYIGPIMSLAPSFAAWAVIPFNEEWVLTNINIGLLYILMITSLSVYGVIIAGWASNSKYSFLGAMRASAQSISYEIAMSAALVCVVMVS 185
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_NEIG1 (NADH-quinone oxidoreductase subunit H OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=nuoH PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.910e-27 Identity = 62/161 (38.51%), Postives = 104/161 (64.60%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLT---LCVLSIS 620 ++ V+ I I ++ + + V + + ER++ +Q R+GP P G++Q AD KLLFKE P N +LF IGP +++ ++ VIPF+ VL ++NIG+ + I+S++ G++++G+ SN+KYSFLG +RA+AQSISYEI ++ +CV+ +S Sbjct: 25 VVSVIVKIVIILIPLILTVAYLTYFERKVIGFMQLRVGPNVTGPRGLIQPFADVFKLLFKEVTRPKLSNKALFYIGPIMSLAPSFAAWAVIPFNEEWVLTNINIGLLYILMITSLSVYGVIIAGWASNSKYSFLGAMRASAQSISYEIAMSAALVCVVMVS 185
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_METFK (NADH-quinone oxidoreductase subunit H OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=nuoH PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.910e-27 Identity = 63/170 (37.06%), Postives = 109/170 (64.12%), Query Frame = 3 Query: 120 LESLQEVYGILWVLAPISIYVLAIT---IGVLVIVWL-EREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 + +Q + G LW +A + ++AI +G + + L ER++ +Q R+GP G+LQ LADG KLL KE ++PS + +LF +GP +A+ L ++ V+PF LVLAD++ G+ +A++S+ G++++G+ SN+KY+FLG +R+AAQ +SYEI + ++ + Sbjct: 2 IAEMQTMLGPLWPVAWNLLKIIAIVGPLMGAVAYLTLAERKVIGFMQVRMGPNRVGYRGLLQPLADGVKLLMKEIIIPSAASRTLFLLGPVLAIAPALAAWAVVPFDLTLVLADIDAGLLYILAMTSVGVYGVIIAGWASNSKYAFLGAMRSAAQIVSYEIAMGFALVGV 171
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_LEGPA (NADH-quinone oxidoreductase subunit H OS=Legionella pneumophila (strain Paris) GN=nuoH PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.910e-27 Identity = 59/159 (37.11%), Postives = 99/159 (62.26%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++W++ I + V+ + + V + + ER++ IQ RIGP G+LQ AD KL+ KE ++P+R N LF I P A++ L+ + VIPF +VLA++N G+ A+SS+ G+L++G+ SN+KY+ G LR+ AQ++SYEI + ++ + L Sbjct: 8 LIWIIIKILVIVVPLLLSVAYLTYAERKVIGYIQVRIGPNRVGLKGLLQPFADLLKLITKEIIVPTRSNKYLFVIAPLFALVPSLVGWAVIPFQEGVVLANINAGVLYLFAMSSLGVYGVLIAGWASNSKYAMFGALRSTAQTVSYEIAMGFALVGVLL 166
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH2_SYNFM (NADH-quinone oxidoreductase subunit H 2 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=nuoH2 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.910e-27 Identity = 62/170 (36.47%), Postives = 102/170 (60.00%), Query Frame = 3 Query: 144 GILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYN---------LVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLR 626 G L ++A ++I + + + +VWLER+ A +Q R GP A G+LQ +AD K++ KE+ +P ++F + P++ LL + VIPF + LV+ADLN+G+ + A+SS+ G+ + G+ SN+KYS LGG+R AAQ ISYE+ L L ++ + ++ Sbjct: 7 GFLVLIAKLTIVLAVLLLVAAYLVWLERKFLARLQIRYGPNRAGKFGLLQPIADIVKMVAKEDTVPEGAERTIFMLAPAVVAATALLVFAVIPFGKDVTLWGMKIPLVVADLNVGLLYFFALSSLGVYGVALGGWASNSKYSLLGGIRGAAQMISYELSLGLAIVPVVMQ 176 The following BLAST results are available for this feature:
BLAST of CK939407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939407 ID=CK939407; Name=CK939407; organism=Citrus sinensis; type=EST; length=887bpback to top |