CK939407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_RALEJ (NADH-quinone oxidoreductase subunit H OS=Ralstonia eutropha (strain JMP134) GN=nuoH PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.559e-27 Identity = 57/156 (36.54%), Postives = 100/156 (64.10%), Query Frame = 3 Query: 150 LWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 LW+L + V+ + + V ++ ER++ + R+GP PLG+LQ +AD KLL KE + P+ + ++ I P + ++ + + VIPF +V+AD+N G+ +AISS+ G++++G+ SN+KY+FLGG+RAAAQ +SYEI + ++++ Sbjct: 20 LWILIRAVLIVVPLLLCVAYLILWERKLIGWMHVRLGPNRVGPLGLLQPIADVLKLLLKEVMTPTHVSKGMYLIAPLMVLMPAVAIWAVIPFQAEVVMADVNAGLLYVMAISSVGVYGVILAGWASNSKYAFLGGMRAAAQMVSYEIAMGFALVTV 175
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_AGRT5 (NADH-quinone oxidoreductase subunit H OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=nuoH PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.559e-27 Identity = 58/164 (35.37%), Postives = 102/164 (62.20%), Query Frame = 3 Query: 138 VYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV 629 V+ L ++ + ++ + + + ++ +R++ A +Q R GP P G+ Q+ AD K + KE ++P+ N ++F + P +AV L +Y VIPF+ V+A++N+GI AISS+ G++M G+ SN+KY FLG LR+AAQ +SYE+ + L ++++ L V Sbjct: 9 VWPALIMVGQSLLLLVCLLVAIAFLLLADRKVWAAVQLRRGPNVVGPFGLFQSFADLLKFILKEPVIPAGANKAVFLLAPLVAVTLALATYAVIPFADGWVVANINVGILYIFAISSLEVYGIIMGGWASNSKYPFLGALRSAAQMVSYEVSIGLVIVTVLLCV 172
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH2_RHOP2 (NADH-quinone oxidoreductase subunit H 2 OS=Rhodopseudomonas palustris (strain HaA2) GN=nuoH2 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.559e-27 Identity = 60/175 (34.29%), Postives = 106/175 (60.57%), Query Frame = 3 Query: 129 LQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPL-------TLCVLSISLRVI 632 + ++ ++ V+ + ++ + I + I+ +R+I A +Q R GP P G+LQ+ AD K++ KE ++PS N +F + P + + L ++ VIP S V+AD+N+G+ +A+SS++ G++M+G+ SN+KY FL LR+AAQ +SYE+ + LCV S++L I Sbjct: 6 MTNLWPLIVVIGQSVLLIVVLLISIAYILLADRKIWAAVQIRRGPNVVGPWGLLQSFADLLKMILKEPMIPSGANKGVFLLAPLVTCVLALSAWAVIPVSAGWVIADINVGVLYILAVSSLSVYGIIMAGWSSNSKYPFLAALRSAAQMVSYEVSIGFVIICVLLCVGSLNLTAI 180
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH1_RHOPB (NADH-quinone oxidoreductase subunit H 1 OS=Rhodopseudomonas palustris (strain BisB18) GN=nuoH1 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.559e-27 Identity = 57/164 (34.76%), Postives = 104/164 (63.41%), Query Frame = 3 Query: 138 VYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV 629 ++ +L V+ + ++ + I + I+ +R+I A +Q R GP P G+LQ+ AD K +FKE ++PS N +F + P ++ + L ++ VIP + V+AD+N+G+ +A+SS++ G++M+G+ SN+KY FL LR+AAQ +SYE+ + ++++ L V Sbjct: 9 LWPLLVVIGQSLLLLILLLITIAYILLADRKIWAAVQIRRGPNVVGPWGLLQSFADLLKFVFKEPMIPSGANKGVFLLAPLVSCVLALAAWAVIPVNAGWVIADINVGVLYILAVSSLSVYGIIMAGWSSNSKYPFLAALRSAAQMVSYEVSIGFVIIAVLLCV 172
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_CUPTR (NADH-quinone oxidoreductase subunit H OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=nuoH PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.260e-27 Identity = 57/156 (36.54%), Postives = 101/156 (64.74%), Query Frame = 3 Query: 150 LWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 LW+L I V+ + + V ++ ER++ + RIGP PLG+LQ +AD KLL KE ++P++ + ++ I P + ++ + + VIPF +V+AD+N G+ +AISS+ G++++G+ SN+KY+F+G +RAAAQ +SYEI + ++++ Sbjct: 20 LWILIRAVIIVVPLLLCVAYLILWERKLIGWMHVRIGPNRVGPLGLLQPIADVLKLLLKEVMMPTQVSRGMYLIAPLMVLMPAVAIWAVIPFQAEVVMADVNAGLLYVMAISSVGVYGVILAGWASNSKYAFIGAMRAAAQMVSYEIAMGFALVTV 175
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH1_SOLUE (NADH-quinone oxidoreductase subunit H 1 OS=Solibacter usitatus (strain Ellin6076) GN=nuoH1 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.260e-27 Identity = 67/161 (41.61%), Postives = 99/161 (61.49%), Query Frame = 3 Query: 168 ISIYVLAITIGVLV-----IVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPF---------SYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCV 608 IS+ A+ GVL+ + W+ER++ A IQ R GP P G+LQ LAD KL+ KE+L+P N L+ P +A+ LLS VIPF + + + DLNIG+ +A+SS+ G+ ++G+ SNNKYS +GGLR++AQ ISYE+P++L + Sbjct: 10 ISLVKAAVIFGVLMTTLAYLQWVERKVIAHIQVRPGPYRVGPHGLLQPLADVIKLITKEDLVPPYVNKPLYLAAPFLAITMALLSISVIPFGPVIHIGPVTTAMQMTDLNIGVLFILAVSSMGVYGIALAGWASNNKYSLIGGLRSSAQMISYELPMSLAI 170
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH1_CYTH3 (NADH-quinone oxidoreductase subunit H 1 OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=nuoH1 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.260e-27 Identity = 63/158 (39.87%), Postives = 101/158 (63.92%), Query Frame = 3 Query: 171 SIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPF-SY--------NLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +++ +++ I + + ER++SA +Q RIGP A P G+LQ LADG K KE ++PS N +LF +GPSIA++ L+ VIP+ SY L + D+NIG+ A+ SI G+++ G+ SNNK+S +G +RA++Q ISYEI + L ++++ Sbjct: 17 AVFTISLVIA-MYSTYAERKVSALLQDRIGPNRAGPFGLLQPLADGVKFFMKEEIIPSSANKALFILGPSIAMMTACLTGAVIPWGSYLEIGGDQIALQVTDINIGVLYIFAVVSIGVYGVMIGGWASNNKFSLMGAIRASSQMISYEIAMGLSIIAL 173
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_EHRRW (NADH-quinone oxidoreductase subunit H OS=Ehrlichia ruminantium (strain Welgevonden) GN=nuoH PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.482e-27 Identity = 65/172 (37.79%), Postives = 105/172 (61.05%), Query Frame = 3 Query: 144 GILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPF-SYNL-----------VLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 G+L L I I ++++ + V +V++ER++ A IQ R GP P G+LQ AD KL+ KE ++P + N F I P I LL + VIPF SY + V+A++NIG+ +AISS+ G++++G+ SN+ Y+FLG +R+A+Q ISYE+ + L ++++ L Sbjct: 17 GVLLFLK-IIIVIISVMVSVAYLVYMERKVIAAIQLRQGPSVVGPFGLLQPFADAIKLIIKEPIIPFKANKLCFLIAPVITFTLALLGWAVIPFGSYIIVDNGQELIVPNVIANINIGVLYILAISSLGVYGIIIAGWSSNSNYAFLGAIRSASQMISYEVSIGLTIVTVLL 187
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_EHRRG (NADH-quinone oxidoreductase subunit H OS=Ehrlichia ruminantium (strain Gardel) GN=nuoH PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.482e-27 Identity = 65/172 (37.79%), Postives = 105/172 (61.05%), Query Frame = 3 Query: 144 GILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPF-SYNL-----------VLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 G+L L I I ++++ + V +V++ER++ A IQ R GP P G+LQ AD KL+ KE ++P + N F I P I LL + VIPF SY + V+A++NIG+ +AISS+ G++++G+ SN+ Y+FLG +R+A+Q ISYE+ + L ++++ L Sbjct: 17 GVLLFLK-IIIVIISVMVSVAYLVYMERKVIAAIQLRQGPSVVGPFGLLQPFADAIKLIIKEPIIPFKANKLCFLIAPVITFTLALLGWAVIPFGSYIIVDNGQELIVPNVIANINIGVLYILAISSLGVYGIIIAGWSSNSNYAFLGAIRSASQMISYEVSIGLTIVTVLL 187
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH1_RHIME (NADH-quinone oxidoreductase subunit H 1 OS=Rhizobium meliloti GN=nuoH1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.482e-27 Identity = 56/152 (36.84%), Postives = 98/152 (64.47%), Query Frame = 3 Query: 174 IYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV 629 + ++A+ + + ++ +R+I A +Q R GP P G+ Q+ AD K +FKE ++P+ N ++F + P ++V L ++ VIP + N V+A++N+GI AISS+ G++M G+ SN+KY FLG LR+AAQ +SYE+ + ++++ L V Sbjct: 21 LLLVALLLFIAYVLLADRKIWAAVQLRRGPNVVGPFGLFQSFADLLKFVFKEPVIPAGANKTIFLLAPLVSVTLALAAWAVIPLNANWVIANINVGILFVFAISSLEVYGIIMGGWASNSKYPFLGALRSAAQMVSYEVSIGFVIVTVLLCV 172 The following BLAST results are available for this feature:
BLAST of CK939407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939407 ID=CK939407; Name=CK939407; organism=Citrus sinensis; type=EST; length=887bpback to top |