CK939407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1C_ACOCL (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Acorus calamus GN=ndhA PE=3 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 6.686e-81 Identity = 157/186 (84.41%), Postives = 170/186 (91.40%), Query Frame = 3 Query: 72 MIIATPEVQDINSFSRLESL--QEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 MIIAT E+Q INSFSR ESL +EVYG++W+L PI +L I IGVLVIVWLEREISAGIQQRIGPEYA PLGILQALADGTKLLFKE+LLPSRG+ SLFS+GPSIAVI+ LLSYLVIPF Y+LVLADL+IG+FLWIAISSIAPIGLLMSGYGSNNKYSF GGLRAAAQSISYEIPLTLCVLSISL Sbjct: 1 MIIATTEIQAINSFSRSESLSLKEVYGLIWLLVPIFTLILVIIIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDISLFSLGPSIAVISTLLSYLVIPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFSGGLRAAAQSISYEIPLTLCVLSISL 186
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1C_RANMC (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Ranunculus macranthus GN=ndhA PE=3 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 8.732e-81 Identity = 156/184 (84.78%), Postives = 169/184 (91.85%), Query Frame = 3 Query: 72 MIIATPEVQDINSFSRLESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 MII T ++Q INSF R ESL+EVYG++W+L PI I VL I IGVLVIVWLER+ISAG+QQRIGPEYA PLGILQALADGTKLLFKE+LLPSRG+ LFSIGPSIAVIAILLSYLVIPF Y+LVLADL+IG+FLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLT CVLSISL Sbjct: 1 MIIDTTKLQAINSFYRSESLKEVYGLVWLLIPIFILVLGIVIGVLVIVWLERQISAGVQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIYLFSIGPSIAVIAILLSYLVIPFGYHLVLADLSIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTPCVLSISL 184
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1C_NASOF (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Nasturtium officinale GN=ndhA PE=3 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 8.732e-81 Identity = 158/184 (85.87%), Postives = 164/184 (89.13%), Query Frame = 3 Query: 72 MIIATPEVQDINSFSRLESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 MII VQ INSF RLESL+EVYG++W+ PI VL I GVLVIVWLEREISAGIQQRIGPEYA PLGILQALADGTKLLFKENL PSRGN LFSIGPSIAVI+ILLSY VIPFS +LVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL Sbjct: 1 MIIYATAVQTINSFVRLESLKEVYGLIWIFVPIFSLVLGIITGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKENLRPSRGNPPLFSIGPSIAVISILLSYSVIPFSNHLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 184
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1C_LOBMA (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Lobularia maritima GN=ndhA PE=3 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 8.732e-81 Identity = 157/184 (85.33%), Postives = 165/184 (89.67%), Query Frame = 3 Query: 72 MIIATPEVQDINSFSRLESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 MII EVQ INSF RLESL+EVYG +W+ PI VL I GVLVIVWLEREISAGIQQRIGPEYA PLGILQALADGTKLLFKE+L PSRGN+ LFSIGPSIAVI+ILLSY +IPFS +LVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL Sbjct: 1 MIIYATEVQTINSFVRLESLKEVYGFIWIFVPIFSLVLGIITGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLRPSRGNTPLFSIGPSIAVISILLSYSIIPFSNHLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 184
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1C_MORIN (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Morus indica GN=ndhA PE=3 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 1.140e-80 Identity = 154/184 (83.70%), Postives = 163/184 (88.59%), Query Frame = 3 Query: 72 MIIATPEVQDINSFSRLESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 MI TPEVQDINSFSR E L+E YGI+W PI VL ITIGVLVIVWLEREISAGIQQRIGPEYA PLG+LQALADG KLLFKENL PSRG + LFSIGPSIAVI+IL+SY V+PF +LVL DLNIG+FLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL Sbjct: 1 MISHTPEVQDINSFSRFEFLKETYGIIWAFIPIFTPVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGAKLLFKENLFPSRGETRLFSIGPSIAVISILVSYSVVPFGSHLVLVDLNIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 184
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1C_EUCGG (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=ndhA PE=3 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 1.140e-80 Identity = 157/185 (84.86%), Postives = 170/185 (91.89%), Query Frame = 3 Query: 72 MIIATPEVQDINSFSRLESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLT-LCVLSISL 623 MII T EVQD+NSFSRLESL+EVYGI+ + PI VL ITIGVLVIVWLEREISAGIQQRIGPEYA PLGILQALADGTKL+FKENL PSRG++ LFSIGPSIAVI+ILLSY VIPFSY+LVL+DLNIG+FLWIAISSIAPIGLLMSGYGSNNKYSFL GLRAAAQSISYEIPLT LCV++ISL Sbjct: 1 MIIDTTEVQDLNSFSRLESLKEVYGIIGMFLPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLIFKENLFPSRGDTRLFSIGPSIAVISILLSYSVIPFSYHLVLSDLNIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLSGLRAAAQSISYEIPLTLLCVINISL 185
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1C_CRUWA (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Crucihimalaya wallichii GN=ndhA PE=3 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 1.140e-80 Identity = 157/184 (85.33%), Postives = 165/184 (89.67%), Query Frame = 3 Query: 72 MIIATPEVQDINSFSRLESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 MI+ VQ INSF RLESL+EVYG++W+ PI VL I GVLVIVWLEREISAGIQQRIGPEYA PLGILQALADGTKLLFKENL PSRGN+ LFSIGPSIAVI+ILLSY VIPFS +LVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL Sbjct: 1 MIMYATAVQTINSFVRLESLKEVYGLIWIFVPIFSLVLGIITGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKENLRPSRGNTPLFSIGPSIAVISILLSYSVIPFSNHLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 184
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1C_BARVE (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Barbarea verna GN=ndhA PE=3 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 1.140e-80 Identity = 157/184 (85.33%), Postives = 164/184 (89.13%), Query Frame = 3 Query: 72 MIIATPEVQDINSFSRLESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 MII VQ INSF RLESL+EVYG++W+ PI +L I GVLVIVWLEREISAGIQQRIGPEYA PLGILQALADGTKLLFKENL PSRGN LFSIGPSIAVI+ILLSY VIPFS +LVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL Sbjct: 1 MIIYATAVQTINSFVRLESLKEVYGLIWIFVPIFSLILGIITGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKENLRPSRGNPPLFSIGPSIAVISILLSYSVIPFSNHLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 184
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1C_PIPCE (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Piper cenocladum GN=ndhA PE=3 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 1.945e-80 Identity = 154/184 (83.70%), Postives = 169/184 (91.85%), Query Frame = 3 Query: 72 MIIATPEVQDINSFSRLESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 MII T +VQ INSFSR ESL+EV G++W+L PI VLAITIGVLVIVWLER+ISAGIQQRIGPEYA PLGILQA+ADGTKLLFKE++LPSRG+ LFSIGPSIAVI+I+LSY VIPFSY+LVLADL IG+FLWIA+SSIAPIGLLMSGYGSNNKYSF GGLRAAAQSISYEIPLTLCVLSISL Sbjct: 1 MIIDTTKVQAINSFSRSESLKEVIGLIWMLVPILTLVLAITIGVLVIVWLERQISAGIQQRIGPEYAGPLGILQAIADGTKLLFKEDILPSRGDIRLFSIGPSIAVISIILSYSVIPFSYHLVLADLGIGVFLWIAVSSIAPIGLLMSGYGSNNKYSFSGGLRAAAQSISYEIPLTLCVLSISL 184
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1C_ATRBE (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Atropa belladonna GN=ndhA PE=3 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 1.945e-80 Identity = 153/184 (83.15%), Postives = 167/184 (90.76%), Query Frame = 3 Query: 72 MIIATPEVQDINSFSRLESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 MII T E++ INSFS+LESL+EVYGI+W+L PI VL ITIGVLVIVWLEREISAGIQQRIGPEYA PLGILQALADGTKLLFKENL+PS G+ LFSIGPSIAVI+I LSY VIPF +LVLADL+IG+FLWIAISS+AP+GLLMSGYGSNNKYSFLGGLRAAAQSISYEIPL LCVLSISL Sbjct: 1 MIIDTTEIETINSFSKLESLKEVYGIIWMLVPILTLVLGITIGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKENLIPSTGDPRLFSIGPSIAVISIFLSYSVIPFGDHLVLADLSIGVFLWIAISSVAPVGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLALCVLSISL 184 The following BLAST results are available for this feature:
BLAST of CK939407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939407 ID=CK939407; Name=CK939407; organism=Citrus sinensis; type=EST; length=887bpback to top |