CK939407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_DICDI (NADH-ubiquinone oxidoreductase chain 1 OS=Dictyostelium discoideum GN=nad1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.482e-27 Identity = 60/148 (40.54%), Postives = 94/148 (63.51%), Query Frame = 3 Query: 174 IYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 I ++ + IGV LER++ A +Q+R GP +G+LQ LADG KL+ KE ++P + +++I P + ++ + VI V A +N G+ +AISSI G++++G+ SN+KY+FLGGLR+AAQ +SYE+ L L +LSI Sbjct: 17 IVIIGLLIGVAFATLLERKVMAAMQKRRGPNVVGFVGLLQPLADGLKLVLKETIIPIVADKLIYAIAPILTFTISIVLWSVIAVGVQSVFASINSGVIFILAISSIGVYGIILAGWASNSKYAFLGGLRSAAQMVSYEVALGLIILSI 164
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_DICCI (NADH-ubiquinone oxidoreductase chain 1 OS=Dictyostelium citrinum GN=nad1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.482e-27 Identity = 60/148 (40.54%), Postives = 94/148 (63.51%), Query Frame = 3 Query: 174 IYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 I ++ + IGV LER++ A +Q+R GP +G+LQ LADG KL+ KE ++P + +++I P + ++ + VI V A +N G+ +AISSI G++++G+ SN+KY+FLGGLR+AAQ +SYE+ L L +LSI Sbjct: 23 IVIIGLLIGVAFATLLERKVMAAMQKRRGPNVVGFVGLLQPLADGLKLVLKETIIPIVADKIIYAIAPILTFTISIVLWSVIAVGVQSVFASINSGVIFILAISSIGVYGIILAGWASNSKYAFLGGLRSAAQMVSYEVALGLIILSI 170
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_ACACA (NADH-ubiquinone oxidoreductase chain 1 OS=Acanthamoeba castellanii GN=ND1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.482e-27 Identity = 61/151 (40.40%), Postives = 100/151 (66.23%), Query Frame = 3 Query: 168 ISIY-VLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +S+Y +L + + V + ER++ A IQ+R GP + LGILQ LAD KL+ KEN +P +S LF GP I +I L ++ VIPF+ V++D+NIGI +SS+ + ++++G+ SN++Y+FLG LR+ AQ I+YE+ + + +++I Sbjct: 11 LSLYLILNVILTVAFLTLFERKVLASIQKRKGPNWTGFLGILQPLADALKLILKENPVPQNASSVLFFGGPLILLILSLSAWFVIPFNNETVVSDINIGILYVFMVSSLNTLNIIVAGWSSNSRYAFLGALRSIAQVIAYEVVIGIIIINI 161
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_POLSJ (NADH-quinone oxidoreductase subunit H OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=nuoH PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.238e-26 Identity = 58/160 (36.25%), Postives = 99/160 (61.88%), Query Frame = 3 Query: 138 VYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 V+ +LW L I +L + V + ER+ Q R GP P G+LQ +AD KLL KE ++P+ + LF +GP + ++ L ++ VIPF ++ L+++N G+ +AI+S+ G++++G+ SN+KY+FLG +RA+AQ +SYEI + C++ + Sbjct: 21 VWPVLWALIKIVCVLLPLMGCVAYLTLWERKAIGFTQIRFGPNRVGPFGLLQPIADALKLLTKEIIMPTAASKGLFVLGPIMTIMPALAAWAVIPFGPDIALSNINAGLLFLMAITSMEVYGVIIAGWASNSKYAFLGAMRASAQMVSYEIAMGFCLVVV 180
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_EHRCR (NADH-quinone oxidoreductase subunit H OS=Ehrlichia chaffeensis (strain Arkansas) GN=nuoH PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.238e-26 Identity = 58/160 (36.25%), Postives = 99/160 (61.88%), Query Frame = 3 Query: 180 VLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLV------------LADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++++ I V +V++ER++ A IQ R GP P G+LQ AD KL+ KE+++P + N F I P I LL + VIPF +++ +A++NIG+ +AISS+ G++++G+ SN+ Y+FLG +R+A+Q ISYE+ + L ++++ L Sbjct: 28 IISVMISVAYLVYMERKVIAAIQLRQGPNVVGPFGLLQPFADAVKLIIKEHIIPFKSNKICFLIAPIITFTLALLGWAVIPFGADVIVNDGYEVIIPNAIANINIGVLYILAISSLGVYGIIIAGWSSNSNYAFLGAIRSASQMISYEVSIGLTIVTVLL 187
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_EHRCJ (NADH-quinone oxidoreductase subunit H OS=Ehrlichia canis (strain Jake) GN=nuoH PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.238e-26 Identity = 59/168 (35.12%), Postives = 101/168 (60.12%), Query Frame = 3 Query: 156 VLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNL------------VLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 +L I ++++ + V +V++ER++ IQ R GP P G+LQ AD KL+ KE+++P + N F I P I LL + VIPF ++ V+A++NIG+ +AISS+ G++++G+ SN+ Y+FLG +R+A+Q ISYE+ + L ++++ L Sbjct: 21 LLIKIMAVIISVMVSVAYLVYMERKVIGAIQLRQGPNVVGPFGLLQPFADAVKLIIKEHIIPFKSNKICFLIAPIITFTLALLGWAVIPFGADVIVNNGHEVIIPNVIANINIGVLYILAISSLGVYGIIIAGWSSNSNYAFLGAIRSASQMISYEVSIGLTIVTVLL 188
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH2_ACIBL (NADH-quinone oxidoreductase subunit H 2 OS=Acidobacteria bacterium (strain Ellin345) GN=nuoH2 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.238e-26 Identity = 63/178 (35.39%), Postives = 97/178 (54.49%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVL-------------------ADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 +L L + + + + V VWLER++ +Q R GP P G+LQ LADG K + KE+LLP N L+ + P +AV LLS ++PF L + D+NIG+ + + ++SI G+ ++G+ SN+KYS LG LRA+AQ +SYE+ L L ++ + L Sbjct: 8 LLVALIKVVLVIFVLLTAVAYTVWLERKVVGRMQNRWGPTRVGPFGLLQPLADGLKFILKEDLLPPHVNKPLYILAPMLAVAMALLSISIVPFGGTLTIGHITTPLQITGIMGANGQPVDINIGLLIILGVTSIGVYGIALAGWSSNSKYSLLGSLRASAQMVSYEVSLGLSLVGVLL 185
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_ROSDO (NADH-quinone oxidoreductase subunit H OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=nuoH PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.617e-26 Identity = 58/154 (37.66%), Postives = 97/154 (62.99%), Query Frame = 3 Query: 156 VLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +LA + + + + +L +V+ +R+I A +Q R GP G+LQ +AD K + KE ++P+ + ++F + P + + LL++ VIPF+ VL+D+N+ I AISS+ G++M G+ SN+KY FLG LR+AAQ ISYE+ L L ++ + Sbjct: 15 ILAQVLAVIGFVMVSLLFLVYGDRKIWAAVQMRRGPNVVGTFGLLQTVADALKYVVKEVVVPAGADKTVFMLAPMTSFVLALLAWAVIPFNDGWVLSDINVAILFVFAISSLEVYGVIMGGWASNSKYPFLGSLRSAAQMISYEVSLGLIIIGV 168
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_DESPS (NADH-quinone oxidoreductase subunit H OS=Desulfotalea psychrophila GN=nuoH PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.617e-26 Identity = 57/156 (36.54%), Postives = 99/156 (63.46%), Query Frame = 3 Query: 156 VLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 VLA I + + + +VW ER +A IQ+R+GP P G+LQ DG KL+ K+ ++P + LF + P +A+ L+S++ IPFS N+V +++IG+ + +A +S A + +L++G+ S NKYS + +RA +Q+I+YEIP+ + +++ L Sbjct: 8 VLAAALIALAFVAVNAAYLVWAERRGAAFIQRRLGPVENGPWGLLQPPVDGIKLMTKQLVIPGGVDKILFMVAPVLAMFPALMSFVTIPFSENIVAHNMDIGLLVILAFASFAGLAILLAGWSSRNKYSMMAAIRAVSQTIAYEIPMLITAITVVL 163
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_CAUCR (NADH-quinone oxidoreductase subunit H OS=Caulobacter crescentus GN=nuoH PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.617e-26 Identity = 58/159 (36.48%), Postives = 100/159 (62.89%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++WVL ++ +LA +R+I AG+Q R GP P G+LQ+ AD K + KE ++P+ + +F + P I++I + + V+PF+ V+++LN+GI +A+SS+ G++M G+ SN+KY FLG LR+AAQ +SYE+ + L ++++ L Sbjct: 24 VIWVLLSLAFLLLA-----------DRKIWAGVQMRKGPNVVGPFGLLQSFADFFKFVLKEIVIPAGADKVVFILAPLISLILAFVGWAVVPFAPGWVVSNLNVGILYLLAMSSLGVYGIIMGGWASNSKYPFLGALRSAAQMVSYEVSIGLIIITVIL 171 The following BLAST results are available for this feature:
BLAST of CK939407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939407 ID=CK939407; Name=CK939407; organism=Citrus sinensis; type=EST; length=887bpback to top |