CK939407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_BACCN (NADH-quinone oxidoreductase subunit H OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=nuoH PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.617e-26 Identity = 65/146 (44.52%), Postives = 89/146 (60.96%), Query Frame = 3 Query: 189 ITIGVLVIVWLEREISAGIQQRIGP-EYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 +T G+L ER++ +Q R+GP + G+LQ +AD KLL KE+ +P + LF + P IA + VIPF+ AD+ +G+ +IAIS I IG+L G+ SNNKYS LGG+RAAAQ ISYEIPL + V+ I L Sbjct: 33 VTYGILA----ERKVMGFMQGRVGPNQVGGRFGLLQTVADVLKLLLKEDSIPKAADKPLFILAPIIAFAPAFMVLAVIPFTSQFQFADIGVGLLYYIAISGITTIGVLTGGWASNNKYSLLGGMRAAAQMISYEIPLVMSVIGIVL 174
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_RHOFD (NADH-quinone oxidoreductase subunit H OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=nuoH PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.112e-26 Identity = 57/157 (36.31%), Postives = 97/157 (61.78%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 ++W L +++ ++ + V ER + A Q R+GP P G+LQ +AD KL+ KE L P+ LF +GP + V+ + ++ VIPF ++ LA++N G+ +AI+S+ G+++SG+ SN+KY FLG LRA++Q +SYEI + C++ + Sbjct: 25 VVWALIKVTLVLMIVMGAVTYTTLWERRLLAWAQIRMGPNRVGPWGLLQPIADAMKLMTKEVLRPAAAEKFLFYLGPVMTVMPAMAAWAVIPFGPDIALANINAGLLFLMAITSMEVYGVIISGWSSNSKYPFLGALRASSQMVSYEIAMGFCLVVV 181
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_SILPO (NADH-quinone oxidoreductase subunit H OS=Silicibacter pomeroyi GN=nuoH PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.759e-26 Identity = 58/158 (36.71%), Postives = 100/158 (63.29%), Query Frame = 3 Query: 150 LWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 L +LA + V + I +L +V+ +R+I A +Q R GP G+LQ++AD K + KE ++P+ + ++F + P + + ++++ VIPF+ VL+D+N+ I A+SS+ G++M G+ SN+KY FLG LR+AAQ ISYE+ + L ++ + L Sbjct: 13 LIILAQVLAVVAFVMISLLFLVYGDRKIWAAVQMRRGPNVVGVYGLLQSVADALKYVVKEVVIPAGADRTVFILAPMTSFVLAMIAWAVIPFNDGWVLSDINVAILYVFAVSSLEVYGVIMGGWASNSKYPFLGSLRSAAQMISYEVSIGLIIIGVIL 170
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_RHILO (NADH-quinone oxidoreductase subunit H OS=Rhizobium loti GN=nuoH PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.759e-26 Identity = 58/158 (36.71%), Postives = 97/158 (61.39%), Query Frame = 3 Query: 150 LWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 L +L + ++ + I V I++ +R+I A +Q R GP P G LQA AD K +FKE ++PS N +F + P ++ + + ++ VIP + +A++N+GI AISS+ G++M G+ SN+KY FLG LR+AAQ +SYE+ + ++++ L Sbjct: 13 LLILLKSVVLIVVLLIFVAYILYADRKIWAAVQLRRGPNVVGPWGTLQAFADLLKFVFKEPVIPSGANKGVFLLAPLVSAVLAISAWAVIPVNQGWAIANVNVGILYVFAISSLEVYGVIMGGWASNSKYPFLGALRSAAQMVSYEVSIGFVIVTVLL 170
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_NITWN (NADH-quinone oxidoreductase subunit H OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=nuoH PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.759e-26 Identity = 56/162 (34.57%), Postives = 101/162 (62.35%), Query Frame = 3 Query: 138 VYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++ ++ ++A + ++ + I + I+ +R+I A +Q R GP P G+ Q+ AD K + KE ++PS N +F + P ++ + L ++ VIP + N V+AD+N+GI AISS++ G++M G+ SN+KY FL LR+AAQ +SYE+ + ++++ L Sbjct: 14 LWPLIVMVAQSVLLLVVLLIAIAYILLADRKIWAAVQIRRGPNVVGPWGLFQSFADLLKFVLKEPIIPSGANKGVFLLAPLVSCVLALAAWAVIPVNLNWVIADINVGILYIFAISSLSIYGIIMGGWASNSKYPFLAALRSAAQMVSYEVSIGFVIITVLL 175
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_JANMA (NADH-quinone oxidoreductase subunit H OS=Janthinobacterium sp. (strain Marseille) GN=nuoH PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.603e-26 Identity = 60/157 (38.22%), Postives = 97/157 (61.78%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 ++W L I V + V + ER++ + R GP P G+LQ +ADG KLL KE ++P++ + +LF I P + ++ L ++ VIPF VLAD+N G+ +AI+S+ G++++G+ SN+KY+FLG +RA+AQ ISYEI + ++ I Sbjct: 22 LVWNLVKIIAVVAPLMGAVAYLTLWERKVIGWMHVRHGPNRTGPAGLLQPIADGVKLLLKEIVVPAKSSKALFVIAPIMTIMPALAAWAVIPFGPETVLADVNAGLLFVMAITSLEVYGVIVAGWASNSKYAFLGAMRASAQMISYEIAMGFVLVII 178
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_PARUW (NADH-quinone oxidoreductase subunit H OS=Protochlamydia amoebophila (strain UWE25) GN=nuoH PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.706e-26 Identity = 60/168 (35.71%), Postives = 100/168 (59.52%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFS---------YNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++ +L ++ +L + + +LER + A +Q R+GP P G+ Q LADG KLL KE P+ + ++ + P I++ L +++IPF L +AD+N+G+ +A SS+A G++++G+ SNN+YS +GGLR AQ ISYEIP+ L +L++ L Sbjct: 5 LIIILIKSAVVILLLFTAAAYMTFLERIVMARLQLRMGPVRVGPFGLFQPLADGIKLLCKERFQPANVETFVYWLAPGISLFTALFIFVLIPFGGVVEIAGRLIYLQIADINVGVVFLLAFSSLAVYGVVLAGWASNNRYSLIGGLRGTAQMISYEIPMGLSLLTVVL 172
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_COXBU (NADH-quinone oxidoreductase subunit H OS=Coxiella burnetii GN=nuoH PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.706e-26 Identity = 55/159 (34.59%), Postives = 100/159 (62.89%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++W++ I + ++ + + V I ER++ +Q R+GP G+ Q +AD KLL KE ++P+ + L+ I P ++++ L ++ VIPF+ VLA++N G+ A++S+ G+L++G+ SN+KY+F G LR+AAQ +SYEIP+ ++ + L Sbjct: 8 LIWIIIKIVLILVPLLVAVAFITLAERKVIGYMQSRVGPNRVGFRGLAQPIADIFKLLLKEVIIPTASSRYLYLIAPILSLVPALAAWAVIPFAQGWVLANVNAGLLFLFAMTSLGVYGILVAGWASNSKYAFFGALRSAAQVVSYEIPMGFALVGVLL 166
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_COXBR (NADH-quinone oxidoreductase subunit H OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=nuoH PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.706e-26 Identity = 55/159 (34.59%), Postives = 100/159 (62.89%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++W++ I + ++ + + V I ER++ +Q R+GP G+ Q +AD KLL KE ++P+ + L+ I P ++++ L ++ VIPF+ VLA++N G+ A++S+ G+L++G+ SN+KY+F G LR+AAQ +SYEIP+ ++ + L Sbjct: 8 LIWIIIKIVLILVPLLVAVAFITLAERKVIGYMQSRVGPNRVGFRGLAQPIADIFKLLLKEVIIPTASSRYLYLIAPILSLVPALAAWAVIPFAQGWVLANVNAGLLFLFAMTSLGVYGILVAGWASNSKYAFFGALRSAAQVVSYEIPMGFALVGVLL 166
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_COXBN (NADH-quinone oxidoreductase subunit H OS=Coxiella burnetii (strain Dugway 5J108-111) GN=nuoH PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.706e-26 Identity = 55/159 (34.59%), Postives = 100/159 (62.89%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++W++ I + ++ + + V I ER++ +Q R+GP G+ Q +AD KLL KE ++P+ + L+ I P ++++ L ++ VIPF+ VLA++N G+ A++S+ G+L++G+ SN+KY+F G LR+AAQ +SYEIP+ ++ + L Sbjct: 8 LIWIIIKIVLILVPLLVAVAFITLAERKVIGYMQSRVGPNRVGFRGLAQPIADIFKLLLKEVIIPTASSRYLYLIAPILSLVPALAAWAVIPFAQGWVLANVNAGLLFLFAMTSLGVYGILVAGWASNSKYAFFGALRSAAQVVSYEIPMGFALVGVLL 166 The following BLAST results are available for this feature:
BLAST of CK939407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK939407 ID=CK939407; Name=CK939407; organism=Citrus sinensis; type=EST; length=887bpback to top |