CK939407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_COXB1 (NADH-quinone oxidoreductase subunit H OS=Coxiella burnetii (strain CbuK_Q154) GN=nuoH PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.706e-26 Identity = 55/159 (34.59%), Postives = 100/159 (62.89%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++W++ I + ++ + + V I ER++ +Q R+GP G+ Q +AD KLL KE ++P+ + L+ I P ++++ L ++ VIPF+ VLA++N G+ A++S+ G+L++G+ SN+KY+F G LR+AAQ +SYEIP+ ++ + L Sbjct: 8 LIWIIIKIVLILVPLLVAVAFITLAERKVIGYMQSRVGPNRVGFRGLAQPIADIFKLLLKEVIIPTASSRYLYLIAPILSLVPALAAWAVIPFAQGWVLANVNAGLLFLFAMTSLGVYGILVAGWASNSKYAFFGALRSAAQVVSYEIPMGFALVGVLL 166
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_CHRVO (NADH-quinone oxidoreductase subunit H OS=Chromobacterium violaceum GN=nuoH PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.706e-26 Identity = 61/171 (35.67%), Postives = 103/171 (60.23%), Query Frame = 3 Query: 120 LESLQEVYG-----ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +E LQ + G ++W L I VL + V + ER++ +Q RIGP P G+LQ +AD KLL KE +LP+ + LF + P +++ L ++ VIPF+ LVLA++N + +A++S+ G++++G+ N+KYSFLG +R+AAQ +SYE+ + ++ + Sbjct: 1 MEFLQGILGTDAGLLVWTLLKIIAIVLPMLGCVAYLTLAERKVIGYMQIRIGPNRVGPFGLLQPIADAVKLLMKEIILPTNSSKGLFLLAPVLSIGPALAAWAVIPFTDKLVLANVNASLLYILALTSMGVYGVIIAGWAGNSKYSFLGAMRSAAQIVSYELAMGFALVGV 171
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_CHLP8 (NADH-quinone oxidoreductase subunit H OS=Chlorobaculum parvum (strain NCIB 8327) GN=nuoH PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.706e-26 Identity = 63/159 (39.62%), Postives = 100/159 (62.89%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 I+ + + I + A+T GV + ER+ISA +Q R+GP G+LQ LAD KLL KE+++P + LF IGP I + L++ V+PF + ADLN+G+F + I +I +G+L +G+GSNNK++ G +R+ AQ +SYEIP ++ +L ++ Sbjct: 28 IIAAIPLVFIALYALTYGV----YGERKISAFMQDRLGPMEVGIWGLLQTLADILKLLQKEDIVPKLADKFLFVIGPGILFVGSFLAFAVLPFGPAFIGADLNVGLFYAVGIVAIEVVGILAAGWGSNNKWALYGAVRSVAQIVSYEIPASIALLCAAM 182
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_CHLCH (NADH-quinone oxidoreductase subunit H OS=Chlorobium chlorochromatii (strain CaD3) GN=nuoH PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.706e-26 Identity = 63/155 (40.65%), Postives = 98/155 (63.23%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 611 I+ + + I + A+T GV + ER+ISA +Q R+GP GILQ LAD KLL KE+++P + LF IGP + + L++ V+PFS + A LN+G+F + I ++ +G+L +G+GSNNK+S G +R+ AQ +SYEIP ++ +L Sbjct: 40 IIAAIPLVFIALYALTYGV----YGERKISAFMQDRLGPMEVGKWGILQTLADILKLLQKEDIVPLSADKFLFVIGPGVLFVGSFLAFAVLPFSPAFIGASLNVGLFYAVGIVALEVVGILAAGWGSNNKWSLYGAVRSVAQIVSYEIPASIALL 190
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_BRUO2 (NADH-quinone oxidoreductase subunit H OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=nuoH PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.706e-26 Identity = 56/152 (36.84%), Postives = 96/152 (63.16%), Query Frame = 3 Query: 174 IYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV 629 + ++ + I V +++ +R+I A +Q R GP P G+ QA AD K +FKE ++PS N +F + P I+ + + ++ VIP + + +A++N+GI AISS+ G++M G+ SN+KY FLG LR+AAQ +SYE+ + ++++ L V Sbjct: 21 VLLVVLLIVVAYLLYADRKIWAAVQLRRGPNVVGPWGLFQAFADLLKFVFKEPIIPSGANKGVFLLAPFISAVLAMATWAVIPVNESWAVANINVGILYIFAISSLEVYGVIMGGWASNSKYPFLGALRSAAQMVSYEVSIGFVIVTVLLTV 172
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_BACHK (NADH-quinone oxidoreductase subunit H OS=Bacillus thuringiensis subsp. konkukian GN=nuoH PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.706e-26 Identity = 64/146 (43.84%), Postives = 89/146 (60.96%), Query Frame = 3 Query: 189 ITIGVLVIVWLEREISAGIQQRIGP-EYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 +T G+L ER++ +Q RIGP + G+LQ +AD KLL KE+ +P + LF + P IA + VIPF+ AD+ +G+ +IA+S I IG++ G+ SNNKYS LGG+RAAAQ ISYEIPL + V+ I L Sbjct: 33 VTYGILA----ERKVMGFMQGRIGPNQVGGRFGLLQTVADVLKLLLKEDSIPKAADKPLFILAPVIAFAPAFMVLAVIPFTDKFQFADIGVGLLYYIAVSGITTIGVVTGGWASNNKYSLLGGMRAAAQMISYEIPLVMSVIGIVL 174
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_BACCZ (NADH-quinone oxidoreductase subunit H OS=Bacillus cereus (strain ZK / E33L) GN=nuoH PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.706e-26 Identity = 64/146 (43.84%), Postives = 89/146 (60.96%), Query Frame = 3 Query: 189 ITIGVLVIVWLEREISAGIQQRIGP-EYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 +T G+L ER++ +Q RIGP + G+LQ +AD KLL KE+ +P + LF + P IA + VIPF+ AD+ +G+ +IA+S I IG++ G+ SNNKYS LGG+RAAAQ ISYEIPL + V+ I L Sbjct: 33 VTYGILA----ERKVMGFMQGRIGPNQVGGRFGLLQTVADVLKLLLKEDSIPKAADKPLFILAPVIAFAPAFMVLAVIPFTDKFQFADIGVGLLYYIAVSGITTIGVVTGGWASNNKYSLLGGMRAAAQMISYEIPLVMSVIGIVL 174
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_BACCR (NADH-quinone oxidoreductase subunit H OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=nuoH PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.706e-26 Identity = 64/146 (43.84%), Postives = 89/146 (60.96%), Query Frame = 3 Query: 189 ITIGVLVIVWLEREISAGIQQRIGP-EYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 +T G+L ER++ +Q RIGP + G+LQ +AD KLL KE+ +P + LF + P IA + VIPF+ AD+ +G+ +IA+S I IG++ G+ SNNKYS LGG+RAAAQ ISYEIPL + V+ I L Sbjct: 33 VTYGILA----ERKVMGFMQGRIGPNQVGGRFGLLQTVADVLKLLLKEDSIPKAADKPLFILAPVIAFAPAFMVLAVIPFTDKFQFADIGVGLLYYIAVSGITTIGVVTGGWASNNKYSLLGGMRAAAQMISYEIPLVMSVIGIVL 174
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_BACCQ (NADH-quinone oxidoreductase subunit H OS=Bacillus cereus (strain Q1) GN=nuoH PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.706e-26 Identity = 64/146 (43.84%), Postives = 89/146 (60.96%), Query Frame = 3 Query: 189 ITIGVLVIVWLEREISAGIQQRIGP-EYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 +T G+L ER++ +Q RIGP + G+LQ +AD KLL KE+ +P + LF + P IA + VIPF+ AD+ +G+ +IA+S I IG++ G+ SNNKYS LGG+RAAAQ ISYEIPL + V+ I L Sbjct: 33 VTYGILA----ERKVMGFMQGRIGPNQVGGRFGLLQTVADVLKLLLKEDSIPKAADKPLFILAPVIAFAPAFMVLAVIPFTDKFQFADIGVGLLYYIAVSGITTIGVVTGGWASNNKYSLLGGMRAAAQMISYEIPLVMSVIGIVL 174
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_BACC7 (NADH-quinone oxidoreductase subunit H OS=Bacillus cereus (strain AH187) GN=nuoH PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.706e-26 Identity = 64/146 (43.84%), Postives = 89/146 (60.96%), Query Frame = 3 Query: 189 ITIGVLVIVWLEREISAGIQQRIGP-EYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 +T G+L ER++ +Q RIGP + G+LQ +AD KLL KE+ +P + LF + P IA + VIPF+ AD+ +G+ +IA+S I IG++ G+ SNNKYS LGG+RAAAQ ISYEIPL + V+ I L Sbjct: 33 VTYGILA----ERKVMGFMQGRIGPNQVGGRFGLLQTVADVLKLLLKEDSIPKAADKPLFILAPVIAFAPAFMVLAVIPFTDKFQFADIGVGLLYYIAVSGITTIGVVTGGWASNNKYSLLGGMRAAAQMISYEIPLVMSVIGIVL 174 The following BLAST results are available for this feature:
BLAST of CK939407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939407 ID=CK939407; Name=CK939407; organism=Citrus sinensis; type=EST; length=887bpback to top |