CK939407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_SALPC (NADH-quinone oxidoreductase subunit H OS=Salmonella paratyphi C (strain RKS4594) GN=nuoH PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.159e-24 Identity = 59/157 (37.58%), Postives = 97/157 (61.78%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +L +L + I ++ +T G + ER + Q R GP G LQ +AD K+ FKE+ +P + +F++ P IA ++LLS+ ++P S N V+ADLNIGI ++ ++ +A +L +G+ SNNKYS LG +RA+AQ++SYE+ L L ++ + Sbjct: 12 LLSILKAVVILLVVVTCGAFMSFG-ERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLSFAIVPVSPNWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTVSYEVFLGLSLMGV 167
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_SALPB (NADH-quinone oxidoreductase subunit H OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=nuoH PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.159e-24 Identity = 59/157 (37.58%), Postives = 97/157 (61.78%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +L +L + I ++ +T G + ER + Q R GP G LQ +AD K+ FKE+ +P + +F++ P IA ++LLS+ ++P S N V+ADLNIGI ++ ++ +A +L +G+ SNNKYS LG +RA+AQ++SYE+ L L ++ + Sbjct: 12 LLSILKAVVILLVVVTCGAFMSFG-ERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLSFAIVPVSPNWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTVSYEVFLGLSLMGV 167
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_SALPA (NADH-quinone oxidoreductase subunit H OS=Salmonella paratyphi A GN=nuoH PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.159e-24 Identity = 59/157 (37.58%), Postives = 97/157 (61.78%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +L +L + I ++ +T G + ER + Q R GP G LQ +AD K+ FKE+ +P + +F++ P IA ++LLS+ ++P S N V+ADLNIGI ++ ++ +A +L +G+ SNNKYS LG +RA+AQ++SYE+ L L ++ + Sbjct: 12 LLSILKAVVILLVVVTCGAFMSFG-ERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLSFAIVPVSPNWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTVSYEVFLGLSLMGV 167
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_SALNS (NADH-quinone oxidoreductase subunit H OS=Salmonella newport (strain SL254) GN=nuoH PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.159e-24 Identity = 59/157 (37.58%), Postives = 97/157 (61.78%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +L +L + I ++ +T G + ER + Q R GP G LQ +AD K+ FKE+ +P + +F++ P IA ++LLS+ ++P S N V+ADLNIGI ++ ++ +A +L +G+ SNNKYS LG +RA+AQ++SYE+ L L ++ + Sbjct: 12 LLSILKAVVILLVVVTCGAFMSFG-ERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLSFAIVPVSPNWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTVSYEVFLGLSLMGV 167
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_SALDC (NADH-quinone oxidoreductase subunit H OS=Salmonella dublin (strain CT_02021853) GN=nuoH PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.159e-24 Identity = 59/157 (37.58%), Postives = 97/157 (61.78%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +L +L + I ++ +T G + ER + Q R GP G LQ +AD K+ FKE+ +P + +F++ P IA ++LLS+ ++P S N V+ADLNIGI ++ ++ +A +L +G+ SNNKYS LG +RA+AQ++SYE+ L L ++ + Sbjct: 12 LLSILKAVVILLVVVTCGAFMSFG-ERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLSFAIVPVSPNWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTVSYEVFLGLSLMGV 167
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_SALCH (NADH-quinone oxidoreductase subunit H OS=Salmonella choleraesuis GN=nuoH PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.159e-24 Identity = 59/157 (37.58%), Postives = 97/157 (61.78%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +L +L + I ++ +T G + ER + Q R GP G LQ +AD K+ FKE+ +P + +F++ P IA ++LLS+ ++P S N V+ADLNIGI ++ ++ +A +L +G+ SNNKYS LG +RA+AQ++SYE+ L L ++ + Sbjct: 12 LLSILKAVVILLVVVTCGAFMSFG-ERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLSFAIVPVSPNWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTVSYEVFLGLSLMGV 167
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_SALA4 (NADH-quinone oxidoreductase subunit H OS=Salmonella agona (strain SL483) GN=nuoH PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.159e-24 Identity = 59/157 (37.58%), Postives = 97/157 (61.78%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +L +L + I ++ +T G + ER + Q R GP G LQ +AD K+ FKE+ +P + +F++ P IA ++LLS+ ++P S N V+ADLNIGI ++ ++ +A +L +G+ SNNKYS LG +RA+AQ++SYE+ L L ++ + Sbjct: 12 LLSILKAVVILLVVVTCGAFMSFG-ERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLSFAIVPVSPNWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTVSYEVFLGLSLMGV 167
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_RALSO (NADH-quinone oxidoreductase subunit H OS=Ralstonia solanacearum GN=nuoH PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.159e-24 Identity = 52/157 (33.12%), Postives = 98/157 (62.42%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 ++W L +L + + V ++ ER++ + R+GP P+G+LQ +AD KLL KE ++PS + ++ I P + ++ + + V+PF V++++N G+ +AISS+ G++++G+ SN+KY+FLG +RA+AQ ISYEI + ++++ Sbjct: 19 LIWTLVRAVCIILPLLLCVAYLILWERKLIGWMHVRVGPNRVGPMGLLQPIADVLKLLLKEVMVPSAVSRGMYIIAPLMVLMPAVAIWAVVPFQAEAVVSNINAGLLYVMAISSVGVYGVILAGWASNSKYAFLGAMRASAQMISYEIAMGFALVTV 175
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_NOCSJ (NADH-quinone oxidoreductase subunit H OS=Nocardioides sp. (strain BAA-499 / JS614) GN=nuoH PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.159e-24 Identity = 58/169 (34.32%), Postives = 99/169 (58.58%), Query Frame = 3 Query: 153 WVLAPISIYVLAITIGVLVI-VWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYN-----------LVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 WV+ ++ +L + + + + +W ER + +Q R GP P G+LQ+LAD KL+FKE ++P + +++ I P IAVI +++ VIPF L L D+ + + +AI+SI G+++ G+ S + YS LGGLR++AQ ISYE+ + L ++++ L Sbjct: 24 WVIGLKAVLILVVLLLLTLFNIWFERRVVGRMQHRPGPNVNGPFGLLQSLADALKLIFKEGIIPKAADKAVYLIAPVIAVIPSFITFSVIPFGPEVTIPFTDTRTPLQLTDMPVAVLFVMAIASIGIYGIVLGGWSSGSTYSLLGGLRSSAQMISYEVAMGLALVAVFL 192
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_LEPBP (NADH-quinone oxidoreductase subunit H OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=nuoH PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.159e-24 Identity = 59/174 (33.91%), Postives = 102/174 (58.62%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPF-----------------SYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 + W + +S++ + +T GV ER+ + IQ R GP A P GI Q LADG K + KE + P + ++ + P+I++ ++++ VIPF + +L +A+ + G+ +AISS++ G++++G+ SNNKYS LGG+R+ AQ ISYE+P+ L +++I Sbjct: 7 LAWGIKILSLFFVILT-GVAYYTLAERKFAGFIQDRPGPNRAGPFGIFQPLADGIKFIAKEEIFPKNVSKGMYLLAPTISMTCAIMAWAVIPFGGTLPAPEWLTTLTGVATIDLQIANPDSGVLYMLAISSLSVYGIMIAGWSSNNKYSLLGGVRSTAQMISYELPMGLSIVAI 179 The following BLAST results are available for this feature:
BLAST of CK939407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939407 ID=CK939407; Name=CK939407; organism=Citrus sinensis; type=EST; length=887bpback to top |