CK939407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_PSEP1 (NADH-quinone oxidoreductase subunit H OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=nuoH PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.514e-24 Identity = 63/182 (34.62%), Postives = 106/182 (58.24%), Query Frame = 3 Query: 84 TPEVQDINSFSRLESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV 629 TPEV D+ IL VL I + + + G L + ++ER + Q R GP P G+ Q AD K+ FKE+ P + +F++ P +A+ A+L++++VIP + +ADLNIG+ + A++ ++ +L +G+ SNNKY+ LG LRA+AQ++SYE+ L L ++ + ++V Sbjct: 5 TPEVIDV--------------ILTVLRAIVVLLAVVVCGAL-LSFVERRLLGWWQDRYGPNRVGPFGMFQIAADMLKMFFKEDWNPPFVDRVIFTLAPVVAMSALLIAFVVIPITPTWGVADLNIGLLFFFAMAGLSVYAVLFAGWSSNNKYALLGSLRASAQTVSYEVFLGLALMGVVVQV 171
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_JANSC (NADH-quinone oxidoreductase subunit H OS=Jannaschia sp. (strain CCS1) GN=nuoH PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.514e-24 Identity = 52/157 (33.12%), Postives = 98/157 (62.42%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 IL +L + V+ + + + +++ +R+I A + R GP G+LQ+ AD K + KE ++P+ + +++ + P ++++ L+++ VIPF+ VL+ LN+ + A+SS+ G++M G+ SN+KY FLG LR+AAQ ISYE+ + L ++ + Sbjct: 13 ILLILLQCLLLVVPLLVALAFLMYADRKIWAAVMMRKGPNVVGAFGLLQSFADFLKYIVKEIVVPAGADRAVYFLAPIVSLVMALIAWAVIPFNDGWVLSSLNVAVLYVFAVSSLEVYGVIMGGWASNSKYPFLGSLRSAAQMISYEVSIGLIIIGV 169
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_BURTA (NADH-quinone oxidoreductase subunit H OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=nuoH PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.514e-24 Identity = 57/156 (36.54%), Postives = 93/156 (59.62%), Query Frame = 3 Query: 150 LWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +W L I + + I + V ++ ER++ + R+GP P G+LQ +AD KLL KE + P+ + L+ I P + V+ + VIPF VLA++N G+ +AISSI ++++G+ SN+KY+FLG +RAAAQ +SYEI + ++ + Sbjct: 22 VWALVRILVVAVVILLCVAYLILWERKLIGWMHVRLGPNRVGPAGLLQPIADVLKLLLKEVIHPTAASRWLYLIAPVMTVVPAFAVWAVIPFQAGAVLANINAGLLYAMAISSIGVYAVILAGWASNSKYAFLGAMRAAAQMVSYEISMGFALVLV 177
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_BURPS (NADH-quinone oxidoreductase subunit H OS=Burkholderia pseudomallei GN=nuoH PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.514e-24 Identity = 56/156 (35.90%), Postives = 93/156 (59.62%), Query Frame = 3 Query: 150 LWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +W L I + + I + V ++ ER++ + R+GP P G+LQ +AD KLL KE + P+ + L+ + P + V+ + VIPF VLA++N G+ +AISSI ++++G+ SN+KY+FLG +RAAAQ +SYEI + ++ + Sbjct: 22 VWALVRILVVAVVILLCVAYLILWERKLIGWMHVRLGPNRVGPAGLLQPIADVLKLLLKEVIRPTAASRWLYLVAPVMTVVPAFAVWAVIPFQAGAVLANINAGLLYAMAISSIGVYAVILAGWASNSKYAFLGAMRAAAQMVSYEISMGFALVLV 177
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_BURP6 (NADH-quinone oxidoreductase subunit H OS=Burkholderia pseudomallei (strain 668) GN=nuoH PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.514e-24 Identity = 56/156 (35.90%), Postives = 93/156 (59.62%), Query Frame = 3 Query: 150 LWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +W L I + + I + V ++ ER++ + R+GP P G+LQ +AD KLL KE + P+ + L+ + P + V+ + VIPF VLA++N G+ +AISSI ++++G+ SN+KY+FLG +RAAAQ +SYEI + ++ + Sbjct: 22 VWALVRILVVAVVILLCVAYLILWERKLIGWMHVRLGPNRVGPAGLLQPIADVLKLLLKEVIRPTAASRWLYLVAPVMTVVPAFAVWAVIPFQAGAVLANINAGLLYAMAISSIGVYAVILAGWASNSKYAFLGAMRAAAQMVSYEISMGFALVLV 177
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_BURP1 (NADH-quinone oxidoreductase subunit H OS=Burkholderia pseudomallei (strain 1710b) GN=nuoH PE=3 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 1.514e-24 Identity = 56/156 (35.90%), Postives = 93/156 (59.62%), Query Frame = 3 Query: 150 LWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +W L I + + I + V ++ ER++ + R+GP P G+LQ +AD KLL KE + P+ + L+ + P + V+ + VIPF VLA++N G+ +AISSI ++++G+ SN+KY+FLG +RAAAQ +SYEI + ++ + Sbjct: 22 VWALVRILVVAVVILLCVAYLILWERKLIGWMHVRLGPNRVGPAGLLQPIADVLKLLLKEVIRPTAASRWLYLVAPVMTVVPAFAVWAVIPFQAGAVLANINAGLLYAMAISSIGVYAVILAGWASNSKYAFLGAMRAAAQMVSYEISMGFALVLV 177
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_BURP0 (NADH-quinone oxidoreductase subunit H OS=Burkholderia pseudomallei (strain 1106a) GN=nuoH PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.514e-24 Identity = 56/156 (35.90%), Postives = 93/156 (59.62%), Query Frame = 3 Query: 150 LWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +W L I + + I + V ++ ER++ + R+GP P G+LQ +AD KLL KE + P+ + L+ + P + V+ + VIPF VLA++N G+ +AISSI ++++G+ SN+KY+FLG +RAAAQ +SYEI + ++ + Sbjct: 22 VWALVRILVVAVVILLCVAYLILWERKLIGWMHVRLGPNRVGPAGLLQPIADVLKLLLKEVIRPTAASRWLYLVAPVMTVVPAFAVWAVIPFQAGAVLANINAGLLYAMAISSIGVYAVILAGWASNSKYAFLGAMRAAAQMVSYEISMGFALVLV 177
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_BURMA (NADH-quinone oxidoreductase subunit H OS=Burkholderia mallei GN=nuoH PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.514e-24 Identity = 56/156 (35.90%), Postives = 93/156 (59.62%), Query Frame = 3 Query: 150 LWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +W L I + + I + V ++ ER++ + R+GP P G+LQ +AD KLL KE + P+ + L+ + P + V+ + VIPF VLA++N G+ +AISSI ++++G+ SN+KY+FLG +RAAAQ +SYEI + ++ + Sbjct: 22 VWALVRILVVAVVILLCVAYLILWERKLIGWMHVRLGPNRVGPAGLLQPIADVLKLLLKEVIRPTAASRWLYLVAPVMTVVPAFAVWAVIPFQAGAVLANINAGLLYAMAISSIGVYAVILAGWASNSKYAFLGAMRAAAQMVSYEISMGFALVLV 177
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_BURM1 (NADH-quinone oxidoreductase subunit H OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=nuoH PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.514e-24 Identity = 57/156 (36.54%), Postives = 93/156 (59.62%), Query Frame = 3 Query: 150 LWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +W L I + + I + V ++ ER++ + R+GP P G+LQ +AD KLL KE + P+ + L+ I P + V+ + VIPF VLA++N G+ +AISSI ++++G+ SN+KY+FLG +RAAAQ +SYEI + ++ + Sbjct: 22 VWALVRILVVAVVILLCVAYLILWERKLIGWMHVRLGPNRVGPAGLLQPIADVLKLLLKEVIQPTAASRWLYLIAPIMTVVPAFAVWAVIPFQAEAVLANVNAGLLYAMAISSIGVYAVILAGWASNSKYAFLGAMRAAAQMVSYEISMGFALVLV 177
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOHI_NOCFA (NADH-quinone oxidoreductase subunits H/I OS=Nocardia farcinica GN=nuoH/I PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.514e-24 Identity = 59/167 (35.33%), Postives = 100/167 (59.88%), Query Frame = 3 Query: 153 WVLAPISIYVLAITIGV-LVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPF---------SYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 W++ S+++ I + LV V ER++ A +Q R+GP P G LQ++ADG K+ FKE+L+P+ + ++ + P ++VI +++ VIP + L L D+ +G+ +AI+SI G++++G+ S + Y LGGLR+ AQ ISYEI + LC ++ L Sbjct: 13 WLVVAKSVFLFVYIILIPLVAVLAERKVVARMQMRVGPNRVGPFGSLQSIADGVKMAFKEDLVPAIVDKPIYLLAPVVSVIPAFMAFAVIPLGGEVSVAGNTTALQLTDMPVGVLYILAITSIGVYGIVLAGWASGSTYPLLGGLRSTAQVISYEIAMALCFAAVFL 179 The following BLAST results are available for this feature:
BLAST of CK939407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939407 ID=CK939407; Name=CK939407; organism=Citrus sinensis; type=EST; length=887bpback to top |