CK939407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_RALPJ (NADH-quinone oxidoreductase subunit H OS=Ralstonia pickettii (strain 12J) GN=nuoH PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.372e-24 Identity = 52/157 (33.12%), Postives = 98/157 (62.42%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 ++W L +L + + V ++ ER++ + R+GP P+G+LQ +AD KLL KE ++PS + ++ I P + ++ + + VIPF +++++N G+ +AISS+ G++++G+ SN+KY+FLG +RA+AQ ISYEI + ++++ Sbjct: 19 LVWTLVRAVCIILPLLLCVAYLILWERKLIGWMHVRLGPNRVGPMGLLQPIADVLKLLLKEVMVPSAVSRGMYIIAPLMVLMPAVAIWAVIPFQAEAMVSNINAGLLYVMAISSVGVYGVILAGWASNSKYAFLGAMRASAQMISYEIAMGFALVTV 175
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_PSEE4 (NADH-quinone oxidoreductase subunit H OS=Pseudomonas entomophila (strain L48) GN=nuoH PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.372e-24 Identity = 55/165 (33.33%), Postives = 102/165 (61.82%), Query Frame = 3 Query: 135 EVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV 629 EV ++ + + +LA+ + ++ ++ER + Q R GP P G+ Q AD K+ FKE+ P + +F++ P +A+ A+L++++VIP + +ADLNIG+ + A++ ++ +L +G+ SNNKY+ LG LRA+AQ++SYE+ L L ++ + ++V Sbjct: 7 EVIDVILTVVRAIVVLLAVVVCGALLSFVERRLLGWWQDRYGPNRVGPFGMFQIAADMLKMFFKEDWNPPFVDRMIFTLAPVVAMSALLIAFVVIPITPLWGVADLNIGLLFFFAMAGLSVYAVLFAGWSSNNKYALLGSLRASAQTVSYEVFLGLALMGVVVQV 171
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_PSEA7 (NADH-quinone oxidoreductase subunit H OS=Pseudomonas aeruginosa (strain PA7) GN=nuoH PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.372e-24 Identity = 60/161 (37.27%), Postives = 98/161 (60.87%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV 629 IL V+ I + +LA+ I ++ W+ER + Q R GP P G Q AD K+ FKE+ P + +F++ P IA+ A+L+++ ++P + +ADLNIGI + A++ + +L +G+ SNNK++ LG LRA+AQ+ISYE+ L L ++ I +V Sbjct: 12 ILTVVKAI-VVLLAVVICGALLSWVERRLLGLWQDRYGPNRVGPFGAFQLGADMIKMFFKEDWTPPFADKMIFTLAPVIAMGALLVAFAIVPITPTWGVADLNIGILFFFAMAGLTVYAVLFAGWSSNNKFALLGSLRASAQTISYEVFLALSLMGIVAQV 171
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_TAPME (NADH-ubiquinone oxidoreductase chain 1 OS=Taphozous melanopogon GN=MT-ND1 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.372e-24 Identity = 57/155 (36.77%), Postives = 95/155 (61.29%), Query Frame = 3 Query: 159 LAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 L + + ++ I + V + LER++ +Q R GP P G+LQ +AD KL KE L P ++++F I P +A+ L ++ +P Y L+ ++N+G+ +A+SS+A +L SG+ SN+KY+ +G LRA AQ+ISYE+ L + +LS+ L Sbjct: 3 LINLLLMIVPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLWPLTSSATMFIIAPILALSLALTMWIPLPMPYPLI--NMNLGVLFMLAMSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLL 155
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_SALSA (NADH-ubiquinone oxidoreductase chain 1 OS=Salmo salar GN=MT-ND1 PE=3 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 3.372e-24 Identity = 60/157 (38.22%), Postives = 95/157 (60.51%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 I ++ P++ Y++ + + V + LER++ +Q R GP P G+LQ +ADG KL KE + PS + LF P +A+ L + +P Y + DLN+G+ +A+SS+A +L SG+ SN+KY+ +G LRA AQ+ISYE+ L L +LS+ Sbjct: 6 ITHIINPLA-YIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPIPYPIT--DLNLGVLFVLALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSV 159
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_ONCMY (NADH-ubiquinone oxidoreductase chain 1 OS=Oncorhynchus mykiss GN=MT-ND1 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.372e-24 Identity = 61/157 (38.85%), Postives = 95/157 (60.51%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 I V+ P++ Y++ + + V + LER++ +Q R GP P G+LQ +ADG KL KE + PS + LF P +A+ L + +P Y + DLN+G+ +A+SS+A +L SG+ SN+KY+ +G LRA AQ+ISYE+ L L +LS+ Sbjct: 5 ITHVINPLA-YIVPVLLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGLKLFIKETVRPSTSSPFLFLATPMLALTLALTLWAPMPIPYPVT--DLNLGVLFVLALSSLAVYSILGSGWASNSKYALIGELRAVAQTISYEVSLGLILLSV 158
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_BOVIN (NADH-ubiquinone oxidoreductase chain 1 OS=Bos taurus GN=MT-ND1 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.372e-24 Identity = 56/152 (36.84%), Postives = 95/152 (62.50%), Query Frame = 3 Query: 168 ISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 I + ++ I + V + +ER++ +Q R GP P G+LQ +AD KL KE L P+ ++S+F + P +A+ L ++ +P Y L+ ++N+G+ +A+SS+A +L SG+ SN+KY+ +G LRA AQ+ISYE+ L + +LS+ L Sbjct: 6 ILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSASMFILAPIMALGLALTMWIPLPMPYPLI--NMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLL 155
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_BOSIN (NADH-ubiquinone oxidoreductase chain 1 OS=Bos indicus GN=MT-ND1 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.372e-24 Identity = 56/152 (36.84%), Postives = 95/152 (62.50%), Query Frame = 3 Query: 168 ISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 I + ++ I + V + +ER++ +Q R GP P G+LQ +AD KL KE L P+ ++S+F + P +A+ L ++ +P Y L+ ++N+G+ +A+SS+A +L SG+ SN+KY+ +G LRA AQ+ISYE+ L + +LS+ L Sbjct: 6 ILMLIIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFIKEPLRPATSSASMFILAPIMALGLALTMWIPLPMPYPLI--NMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLL 155
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_ASTPE (NADH-ubiquinone oxidoreductase chain 1 OS=Asterina pectinifera GN=ND1 PE=3 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 3.372e-24 Identity = 59/150 (39.33%), Postives = 93/150 (62.00%), Query Frame = 3 Query: 174 IYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++++ + + V ++ +ER++ +Q R GP P G+LQ +ADG KLL KE L PS + LF P + + L+ + VIP Y++V +N+ + L I +SS++ LL SG+ SN+ YSFLG +RA AQ++SYEI L L +L + L Sbjct: 12 LFIVPVLLAVALLTLVERKVLGYMQLRKGPNIVGPFGLLQPIADGFKLLIKETLKPSNASPYLFFFSPVLFLGIALVLWSVIPVKYSVV--SVNLSLMLIIGLSSLSVYSLLGSGWSSNSNYSFLGAVRAVAQTVSYEISLGLILLGVVL 159
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_NITEC (NADH-quinone oxidoreductase subunit H OS=Nitrosomonas eutropha (strain C91) GN=nuoH PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.404e-24 Identity = 65/170 (38.24%), Postives = 106/170 (62.35%), Query Frame = 3 Query: 150 LWVLAPISIYVLAITIGVLVIV----WLEREISAGIQQRIGPEYASPLGIL------QALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPL---TLCVLSIS 620 L++LA + +LAI I +L+ V + ER+I A +Q R+GP + GI Q +AD K + KE ++P+ N LF + P +A+ L ++ V+PFS LVLAD+N + +A++S+ G++++G+ SN+KY+FLG +R+AAQ ISYE+ + +CVL +S Sbjct: 20 LFLLAKNLLLILAIIIPLLLAVAYLTFAERKIIAFMQVRVGPNRVTFFGIPWLGGWGQPIADAVKAIMKEIIIPTGANKFLFLLAPILAITPALAAWAVVPFSPELVLADINAALLYILAMTSLGVYGVIIAGWASNSKYAFLGAMRSAAQVISYELAMGFALVCVLMMS 189 The following BLAST results are available for this feature:
BLAST of CK939407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939407 ID=CK939407; Name=CK939407; organism=Citrus sinensis; type=EST; length=887bpback to top |