CK939407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_PSEPG (NADH-quinone oxidoreductase subunit H OS=Pseudomonas putida (strain GB-1) GN=nuoH PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.513e-24 Identity = 54/165 (32.73%), Postives = 100/165 (60.61%), Query Frame = 3 Query: 135 EVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV 629 EV ++ + + +LA+ + ++ ++ER + Q R GP P G+ Q AD K+ FKE+ P + +F++ P +A+ A+L+ + +IP + +ADLNIG+ + A++ ++ +L +G+ SNNKY+ LG LRA+AQ++SYE+ L L ++ + ++V Sbjct: 7 EVIDVIIQVVKAIVVLLAVVVCGALLSFVERRLLGWWQDRYGPNRVGPFGMFQIAADMLKMFFKEDWNPPFVDKMIFTLAPVVAMSALLIGFSIIPITPGWGVADLNIGLLFFFAMAGLSVYAVLFAGWSSNNKYALLGSLRASAQTVSYEVFLGLALMGVVVQV 171
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_PELCD (NADH-quinone oxidoreductase subunit H OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=nuoH PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.513e-24 Identity = 63/168 (37.50%), Postives = 101/168 (60.12%), Query Frame = 3 Query: 168 ISIYVLAITIGVLV---------IVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPF---------SYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +++ ++ I +G+++ +V ER+I +Q R GP G+LQ LAD KLL KE+L+P R + +F + P+I+ I LL++ VIPF S +V+ DLNIG+ A+SS+A G+ + G+ S++KY+ LGGLRA AQ ISYE+ + L ++ + Sbjct: 6 LTLILIVIKLGLVLGTVLTLAAYMVLAERKILGRMQMRYGPNRVGWGGMLQPLADLIKLLCKEDLIPQRADRWVFMLAPAISTITALLAFAVIPFGAPLQLFDRSLPMVICDLNIGLLYLFALSSLAVYGVALGGWASHSKYALLGGLRAMAQMISYELAMGLAIVPV 173
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_HELAH (NADH-quinone oxidoreductase subunit H OS=Helicobacter acinonychis (strain Sheeba) GN=nuoH PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.513e-24 Identity = 56/169 (33.14%), Postives = 96/169 (56.80%), Query Frame = 3 Query: 168 ISIYVLAITIGVLVIV-----------WLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNL---------VLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLS 614 +S Y++ I +L++V ++ER++ A Q+R+GP Y P G+LQ ADG KL KE+++P N +F++ P IA+++ +S IPF N +++D+NIG ++A+ + +++G SNNKYS +G RA Q +S+E+ TL +L+ Sbjct: 1 MSAYIIETLIKILILVAVFSALGGFATYIERKVLAYFQRRLGPSYVGPFGLLQVAADGIKLFTKEDIIPQGANKLIFTLAPIIAMVSAFVSMAPIPFFPNFTLFGYEIKPIISDINIGFLFFLAVGAAGIYAPILAGLASNNKYSLIGSARATIQLLSFEVVSTLTILA 169
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_BAUCH (NADH-quinone oxidoreductase subunit H OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=nuoH PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.513e-24 Identity = 59/157 (37.58%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +L ++ I + +TIG + + ER + Q R GP G LQ LAD K+LFKE+ +P + +F++ P IA ++LL + ++P S N V+ +LNIGI ++ ++ I+ +L+ G+ SNNKYS LG +RAAAQ++SYE+ L L ++ + Sbjct: 9 LLAIVKAIVTLLSVVTIGAYMS-FFERRLLGLFQHRYGPNRVGWGGSLQLLADTIKILFKEDWIPPFADRIIFTLAPIIAFTSLLLVFAIMPISPNWVVIELNIGILFFLMMAGISVYAILLGGWSSNNKYSLLGAMRAAAQTLSYEVFLGLSIMGV 164
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_BARHE (NADH-quinone oxidoreductase subunit H OS=Bartonella henselae GN=nuoH PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.513e-24 Identity = 52/162 (32.10%), Postives = 100/162 (61.73%), Query Frame = 3 Query: 138 VYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++ +L ++ + ++ + + V +++ +R+I A +Q R GP P G+LQ+ AD K + KE ++P+ N +F + P ++ L ++ VIP + +A++N+G+ +AISS+ G++M G+ SN+KY FLG LR+AAQ +SYE+ + ++++ L Sbjct: 10 LFPLLIIVGKTLLLLVILLLLVAYLLYADRKIWAAVQLRRGPNVVGPWGLLQSFADLIKFVVKEPIIPAGANKGVFLLAPFVSATLALSTWAVIPVNEGWAVANINVGLLYILAISSLEVYGVIMGGWASNSKYPFLGALRSAAQMVSYEVSIGFVLVTVIL 171
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_VOMUR (NADH-ubiquinone oxidoreductase chain 1 OS=Vombatus ursinus GN=MT-ND1 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.513e-24 Identity = 57/150 (38.00%), Postives = 91/150 (60.67%), Query Frame = 3 Query: 174 IYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 +Y++ I + V + +ER++ +Q R GP P G+LQ +AD KL KE L P + S+F I P +A+ L + +P + L+ DLN+G+ +A+S ++ +L SG+ SN+KY+ +G LRA AQ+ISYE+ L + +LSI L Sbjct: 8 LYIVPILLAVAFLTLVERKVLGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSISMFIIAPILALTIALTIWTPLPMPHTLI--DLNLGLLFILALSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIML 155
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_SQUAC (NADH-ubiquinone oxidoreductase chain 1 OS=Squalus acanthias GN=MT-ND1 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.513e-24 Identity = 58/157 (36.94%), Postives = 99/157 (63.06%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +L+++ P++ Y++ I + + +ER+I +Q R GP P G+LQ +ADG KL KE + PS + LF P++A+ LL ++ +P + ++ +LN+G+ +A+SS+ +L SG+ SN+KY+ +G LRA AQ+ISYE+ L L +LS+ Sbjct: 6 LLYLINPLA-YIVPILLATAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPTLALTLALLMWMPLPLPHAII--NLNLGLLFILAVSSLTVYTILGSGWASNSKYALMGALRAVAQTISYEVSLGLILLSM 159
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_PIG (NADH-ubiquinone oxidoreductase chain 1 OS=Sus scrofa GN=MT-ND1 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.513e-24 Identity = 56/148 (37.84%), Postives = 92/148 (62.16%), Query Frame = 3 Query: 180 VLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++ I + V + +ER++ +Q R GP P G+LQ +AD KL KE L P+ + S+F I P +A+ L ++ +P Y L+ ++N+G+ +A+SS+A +L SG+ SN+KY+ +G LRA AQ+ISYE+ L + +LS+ L Sbjct: 10 IIPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADALKLFTKEPLRPATSSISMFIIAPILALSLALTMWVPLPMPYPLI--NMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLL 155
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_EPTNI (NADH-ubiquinone oxidoreductase chain 1 OS=Eptesicus nilssoni GN=MT-ND1 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.513e-24 Identity = 57/148 (38.51%), Postives = 91/148 (61.49%), Query Frame = 3 Query: 180 VLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++ I + V + LER++ +Q R GP P G+LQ +AD KL KE L P + LF I P++A+ L+ ++ +P + L ++N+ I +A+SS+A G++ SG+ SN+KY+ +G LRA AQ+ISYE+ L + +LSI L Sbjct: 10 IIPILLAVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLQPLTSSHVLFIIAPTLALTLALMMWIPLPMPHPLT--NMNLSILFMLALSSLAVYGIMWSGWASNSKYALIGALRAVAQTISYEVTLAIIILSILL 155
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_XANAC (NADH-quinone oxidoreductase subunit H OS=Xanthomonas axonopodis pv. citri GN=nuoH PE=3 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 9.812e-24 Identity = 54/159 (33.96%), Postives = 97/159 (61.01%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 +LW + I + + + + V V ER++ + R GP Y +GI QA AD KLLFKE + P+ + ++F I P + + ++ V+PF LVL++ N+G+ +A++S+ G++++G+ SN+KY+FLG +R+AAQ +SYEI + ++ + + Sbjct: 25 VLWSVLKILLIAVPVIVTVAFYVVWERKLIGWMHVRHGPMYVG-MGIFQAFADVFKLLFKEIVQPASSHKAMFVIAPLLTLAPAFAAWSVVPFDAKLVLSNANVGLLYLLAMTSLGVYGIILAGWASNSKYAFLGAMRSAAQVVSYEIAMGFALVGVMI 182 The following BLAST results are available for this feature:
BLAST of CK939407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939407 ID=CK939407; Name=CK939407; organism=Citrus sinensis; type=EST; length=887bpback to top |