CK939407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_SODGM (NADH-quinone oxidoreductase subunit H OS=Sodalis glossinidius (strain morsitans) GN=nuoH PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.812e-24 Identity = 61/178 (34.27%), Postives = 103/178 (57.87%), Query Frame = 3 Query: 84 TPEVQDINSFSRLESLQEVYGILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 TPEV DI +L V+ + I ++ +T G + + ER + Q R GP G LQ LAD K++FKE+ +P + +F++ P IA ++L+++ ++P S V+AD NIG+ ++ ++ +A +L +G+ SNNKYS LG +RA+AQ++SYE+ L L ++ + Sbjct: 5 TPEVIDI--------------LLTVVKAVVILLVVVTCGAYMS-FAERRLLGLFQNRYGPNRVGWGGSLQLLADVLKMMFKEDWIPPFADRGIFTLAPVIAFTSLLITFAIVPVSPTWVVADFNIGVLFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGV 167
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_PSEU2 (NADH-quinone oxidoreductase subunit H OS=Pseudomonas syringae pv. syringae (strain B728a) GN=nuoH PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.812e-24 Identity = 52/152 (34.21%), Postives = 96/152 (63.16%), Query Frame = 3 Query: 174 IYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV 629 + +LA+ + ++ ++ER + Q R GP P G+ Q AD K+ FKE+ P + +F++ P +A+ A+L+++ VIP + +ADLNIG+ + A++ ++ +L +G+ SNNK++ LG LRA+AQ++SYE+ + L ++ I ++V Sbjct: 20 VVLLAVVVCGALLSFIERRLLGWWQDRYGPNRVGPFGMFQIAADMLKMFFKEDWTPPFADKVIFTLAPVVAMSALLIAFAVIPITPTWGVADLNIGLLFFFAMAGLSVYAVLFAGWSSNNKFALLGSLRASAQTVSYEVFMGLALMGIVVQV 171
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_PSE14 (NADH-quinone oxidoreductase subunit H OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=nuoH PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.812e-24 Identity = 52/152 (34.21%), Postives = 96/152 (63.16%), Query Frame = 3 Query: 174 IYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV 629 + +LA+ + ++ ++ER + Q R GP P G+ Q AD K+ FKE+ P + +F++ P +A+ A+L+++ VIP + +ADLNIG+ + A++ ++ +L +G+ SNNK++ LG LRA+AQ++SYE+ + L ++ I ++V Sbjct: 20 VVLLAVVVCGALLSFIERRLLGWWQDRYGPNRVGPFGMFQIAADMLKMFFKEDWTPPFADKVIFTLAPVVAMSALLIAFAVIPITPTWGVADLNIGLLFFFAMAGLSVYAVLFAGWSSNNKFALLGSLRASAQTVSYEVFMGLALMGIVVQV 171
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_ECOUT (NADH-quinone oxidoreductase subunit H OS=Escherichia coli (strain UTI89 / UPEC) GN=nuoH PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.812e-24 Identity = 58/157 (36.94%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +L VL + I ++ +T G + ER + Q R GP G LQ +AD K+ FKE+ +P + +F++ P IA ++LL++ ++P S V+ADLNIGI ++ ++ +A +L +G+ SNNKYS LG +RA+AQ++SYE+ L L ++ + Sbjct: 12 LLTVLKAVVILLVVVTCGAFMSFG-ERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGV 167
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_ECOL6 (NADH-quinone oxidoreductase subunit H OS=Escherichia coli O6 GN=nuoH PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.812e-24 Identity = 58/157 (36.94%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +L VL + I ++ +T G + ER + Q R GP G LQ +AD K+ FKE+ +P + +F++ P IA ++LL++ ++P S V+ADLNIGI ++ ++ +A +L +G+ SNNKYS LG +RA+AQ++SYE+ L L ++ + Sbjct: 12 LLTVLKAVVILLVVVTCGAFMSFG-ERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGV 167
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_ECOL5 (NADH-quinone oxidoreductase subunit H OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=nuoH PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.812e-24 Identity = 58/157 (36.94%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +L VL + I ++ +T G + ER + Q R GP G LQ +AD K+ FKE+ +P + +F++ P IA ++LL++ ++P S V+ADLNIGI ++ ++ +A +L +G+ SNNKYS LG +RA+AQ++SYE+ L L ++ + Sbjct: 12 LLTVLKAVVILLVVVTCGAFMSFG-ERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGV 167
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_ECOK1 (NADH-quinone oxidoreductase subunit H OS=Escherichia coli O1:K1 / APEC GN=nuoH PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.812e-24 Identity = 58/157 (36.94%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +L VL + I ++ +T G + ER + Q R GP G LQ +AD K+ FKE+ +P + +F++ P IA ++LL++ ++P S V+ADLNIGI ++ ++ +A +L +G+ SNNKYS LG +RA+AQ++SYE+ L L ++ + Sbjct: 12 LLTVLKAVVILLVVVTCGAFMSFG-ERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGV 167
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_ECO81 (NADH-quinone oxidoreductase subunit H OS=Escherichia coli O81 (strain ED1a) GN=nuoH PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.812e-24 Identity = 58/157 (36.94%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +L VL + I ++ +T G + ER + Q R GP G LQ +AD K+ FKE+ +P + +F++ P IA ++LL++ ++P S V+ADLNIGI ++ ++ +A +L +G+ SNNKYS LG +RA+AQ++SYE+ L L ++ + Sbjct: 12 LLTVLKAVVILLVVVTCGAFMSFG-ERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGV 167
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_ECO45 (NADH-quinone oxidoreductase subunit H OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=nuoH PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.812e-24 Identity = 58/157 (36.94%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +L VL + I ++ +T G + ER + Q R GP G LQ +AD K+ FKE+ +P + +F++ P IA ++LL++ ++P S V+ADLNIGI ++ ++ +A +L +G+ SNNKYS LG +RA+AQ++SYE+ L L ++ + Sbjct: 12 LLTVLKAVVILLVVVTCGAFMSFG-ERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGV 167
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_BARBK (NADH-quinone oxidoreductase subunit H OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=nuoH PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.812e-24 Identity = 59/164 (35.98%), Postives = 101/164 (61.59%), Query Frame = 3 Query: 153 WVLAPISIYV----LAITIGVLVIVWL---EREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 W+L P+ I V L +T+ +++I +L +R+I A +Q R GP P G+LQ+ AD K + KE ++PS N +F + P ++ L ++ V+P + +A +N+G+ +AISS+ G++M G+ SN+KY FLG LR+AAQ +SYE+ + ++++ L Sbjct: 8 WLL-PLFIVVGKTLLLLTVLLVLIAYLLYADRKIWAAVQLRRGPNVVGPWGLLQSFADLIKFVVKEPIIPSGANKGVFLLAPFVSATLALSAWAVVPVNEGWEIASINVGLLYILAISSLEVYGVIMGGWASNSKYPFLGALRSAAQMVSYEVSIGFVLVTVIL 170 The following BLAST results are available for this feature:
BLAST of CK939407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939407 ID=CK939407; Name=CK939407; organism=Citrus sinensis; type=EST; length=887bpback to top |