CK939407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_AERS4 (NADH-quinone oxidoreductase subunit H OS=Aeromonas salmonicida (strain A449) GN=nuoH PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.812e-24 Identity = 57/152 (37.50%), Postives = 94/152 (61.84%), Query Frame = 3 Query: 183 LAITIGVL----VIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLR 626 L + +G++ + ++ER + A Q R GP P G+LQ AD K+ FKE+ +P + +F + P IA A +L++ V+P + +ADLN+G+ +AI+ +A +L +G+ SNNKYS LG LRA+AQ++SYE+ L L ++ I ++ Sbjct: 16 LIVLVGIVGAGAFMSFIERRLLALWQDRYGPNRVGPFGLLQLAADMIKMFFKEDWIPPFADRRIFILAPIIAFTAFILAFAVVPLTPTWGVADLNVGLLYILAIAGLAVYAVLFAGWSSNNKYSLLGSLRASAQTLSYEVFLGLSLMGIVIQ 167
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_AERHH (NADH-quinone oxidoreductase subunit H OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=nuoH PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.812e-24 Identity = 57/152 (37.50%), Postives = 94/152 (61.84%), Query Frame = 3 Query: 183 LAITIGVL----VIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLR 626 L + +G++ + ++ER + A Q R GP P G+LQ AD K+ FKE+ +P + +F + P IA A +L++ V+P + +ADLN+G+ +AI+ +A +L +G+ SNNKYS LG LRA+AQ++SYE+ L L ++ I ++ Sbjct: 16 LIVLVGIVGAGAFMSFIERRLLALWQDRYGPNRVGPFGLLQLAADMIKMFFKEDWIPPFADRRIFVLAPIIAFTAFILAFAVVPITPTWGVADLNVGLLYILAIAGLAVYAVLFAGWSSNNKYSLLGSLRASAQTLSYEVFLGLSLMGIVIQ 167
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_GADMO (NADH-ubiquinone oxidoreductase chain 1 OS=Gadus morhua GN=MT-ND1 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.812e-24 Identity = 61/157 (38.85%), Postives = 98/157 (62.42%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 + ++L P+ IY++ + + V + +ER++ +Q R GP P G+LQ +ADG KL KE + PS + SLF + P +A+ L + +P + + ADLN+ I +A+SS+A +L SG+ SN+KY+ +G LRA AQ+ISYE+ L L +LS+ Sbjct: 6 VSYILNPL-IYMVPVLLAVAFLTLIERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPIRPSTSSPSLFVL-PVLALTLALTLWAPMPMPFPV--ADLNLSILFVLALSSLAVYSILGSGWASNSKYALVGALRAVAQTISYEVSLGLILLSV 158
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_SHISS (NADH-quinone oxidoreductase subunit H OS=Shigella sonnei (strain Ss046) GN=nuoH PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.281e-23 Identity = 57/157 (36.31%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +L +L + I ++ +T G + ER + Q R GP G LQ +AD K+ FKE+ +P + +F++ P IA ++LL++ ++P S V+ADLNIGI ++ ++ +A +L +G+ SNNKYS LG +RA+AQ++SYE+ L L ++ + Sbjct: 12 LLTILKAVVILLVVVTCGAFMSFG-ERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGV 167
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_SHIFL (NADH-quinone oxidoreductase subunit H OS=Shigella flexneri GN=nuoH PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.281e-23 Identity = 57/157 (36.31%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +L +L + I ++ +T G + ER + Q R GP G LQ +AD K+ FKE+ +P + +F++ P IA ++LL++ ++P S V+ADLNIGI ++ ++ +A +L +G+ SNNKYS LG +RA+AQ++SYE+ L L ++ + Sbjct: 12 LLTILKAVVILLVVVTCGAFMSFG-ERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGV 167
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_SHIF8 (NADH-quinone oxidoreductase subunit H OS=Shigella flexneri serotype 5b (strain 8401) GN=nuoH PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.281e-23 Identity = 57/157 (36.31%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +L +L + I ++ +T G + ER + Q R GP G LQ +AD K+ FKE+ +P + +F++ P IA ++LL++ ++P S V+ADLNIGI ++ ++ +A +L +G+ SNNKYS LG +RA+AQ++SYE+ L L ++ + Sbjct: 12 LLTILKAVVILLVVVTCGAFMSFG-ERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGV 167
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_SHIDS (NADH-quinone oxidoreductase subunit H OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=nuoH PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.281e-23 Identity = 57/157 (36.31%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +L +L + I ++ +T G + ER + Q R GP G LQ +AD K+ FKE+ +P + +F++ P IA ++LL++ ++P S V+ADLNIGI ++ ++ +A +L +G+ SNNKYS LG +RA+AQ++SYE+ L L ++ + Sbjct: 12 LLTILKAVVILLVVVTCGAFMSFG-ERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGV 167
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_SHIBS (NADH-quinone oxidoreductase subunit H OS=Shigella boydii serotype 4 (strain Sb227) GN=nuoH PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.281e-23 Identity = 57/157 (36.31%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +L +L + I ++ +T G + ER + Q R GP G LQ +AD K+ FKE+ +P + +F++ P IA ++LL++ ++P S V+ADLNIGI ++ ++ +A +L +G+ SNNKYS LG +RA+AQ++SYE+ L L ++ + Sbjct: 12 LLTILKAVVILLVVVTCGAFMSFG-ERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGV 167
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_SHIB3 (NADH-quinone oxidoreductase subunit H OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=nuoH PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.281e-23 Identity = 57/157 (36.31%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +L +L + I ++ +T G + ER + Q R GP G LQ +AD K+ FKE+ +P + +F++ P IA ++LL++ ++P S V+ADLNIGI ++ ++ +A +L +G+ SNNKYS LG +RA+AQ++SYE+ L L ++ + Sbjct: 12 LLTILKAVVILLVVVTCGAFMSFG-ERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGV 167
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_SHEON (NADH-quinone oxidoreductase subunit H OS=Shewanella oneidensis GN=nuoH PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.281e-23 Identity = 57/152 (37.50%), Postives = 94/152 (61.84%), Query Frame = 3 Query: 183 LAITIGVL----VIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLR 626 L + +G++ + ++ER + A Q R GP P G+ Q LAD K+ FKE+ +P + +F + P IA A +L++ V+P + +ADLN+G+ +AI+ +A +L +G+ SNNKYS LG LRA+AQ++SYE+ L L ++ I ++ Sbjct: 16 LIVLVGIVGAGAFMSFIERRLLALWQDRHGPNRVGPFGLFQLLADMIKMFFKEDWIPPFADRRIFILAPIIAFTAFILAFAVVPITPTWGVADLNVGLLYILAIAGLAVYAVLFAGWSSNNKYSLLGSLRASAQTLSYEVFLGLSLMGIVIQ 167 The following BLAST results are available for this feature:
BLAST of CK939407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939407 ID=CK939407; Name=CK939407; organism=Citrus sinensis; type=EST; length=887bpback to top |