CK939407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_BURCJ (NADH-quinone oxidoreductase subunit H OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=nuoH PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.281e-23 Identity = 56/156 (35.90%), Postives = 93/156 (59.62%), Query Frame = 3 Query: 150 LWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +W + I + + I + V ++ ER++ + R+GP P G+LQ +AD KLL KE + P+ + L+ I P + V+ + VIPF VLA++N G+ +AISSI ++++G+ SN+KY+FLG +RAAAQ +SYEI + ++ + Sbjct: 22 VWAVVRILVVSVVILLCVAYLILWERKLIGWMHVRLGPNRVGPGGLLQPIADVLKLLLKEVIQPTAASRWLYLIAPIMTVVPAFAVWAVIPFQAEAVLANVNAGLLYAMAISSIGVYAVILAGWASNSKYAFLGAMRAAAQMVSYEISMGFALVLV 177
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_BDEBA (NADH-quinone oxidoreductase subunit H OS=Bdellovibrio bacteriovorus GN=nuoH PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.281e-23 Identity = 61/167 (36.53%), Postives = 91/167 (54.49%), Query Frame = 3 Query: 174 IYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLA-------------------DLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 + L + V ++VWLER SA IQ R+GP PLG++Q LAD K L KEN +P L+ P A+I +++ IP S + + D+ +GI + +SS+A LLM+G+GS NKY+ +G LRA+AQ+ISYE+ L L ++ + Sbjct: 19 VIFLMMVQAVPILVWLERRGSAFIQDRLGPNRVGPLGLVQLLADAVKFLNKENFMPQTAKPFLYYAAPIFALIPGAVAFSAIPLSSPIQVGTFEMFGSTWGPYTFLVQGYDIGVGIVFILGVSSLAAYTLLMAGWGSGNKYTLMGALRASAQTISYELALGLSIVGV 185
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH2_GEOSL (NADH-quinone oxidoreductase subunit H 2 OS=Geobacter sulfurreducens GN=nuoH2 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.281e-23 Identity = 60/155 (38.71%), Postives = 94/155 (60.65%), Query Frame = 3 Query: 174 IYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPF---------SYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 611 I+ + +T+ +V+ ER + A IQ R GP P G+LQ LAD KLL KE+ P+ + LF + P++A + +L++ VIPF L +ADLN+G+ ++A+SSIA G+ + G+ SN+KY+ LG +R AQ ISYE+ + L ++ Sbjct: 18 IFFVVLTLAAY-LVFAERRLLAWIQDRKGPNRVGPFGLLQPLADLIKLLTKEDFRPAGADKWLFYLAPAMAAVPAILTFAVIPFGAPVTILGREIPLQVADLNVGLLFFLALSSIAVYGVALGGWASNSKYALLGSIRGLAQLISYELSMGLSLV 171
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_NOTTY (NADH-ubiquinone oxidoreductase chain 1 OS=Notoryctes typhlops GN=MT-ND1 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.281e-23 Identity = 56/150 (37.33%), Postives = 91/150 (60.67%), Query Frame = 3 Query: 174 IYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 +Y++ I + V + +ER++ +Q R GP P G+LQ AD KL KE L P + ++++ P++A+ L + +P Y+LV DLN+G+ +A+SS++ +L SG+ SN+KY G LRA AQ+ISYE+ L + +LSI + Sbjct: 8 LYIIPILLAVAFLTLIERKVLGYMQFRKGPNVVGPYGLLQPFADAVKLFTKEPLHPLSSSVLMYTLAPTLALTLALTIWTPLPMPYSLV--DLNLGLLFILALSSLSVYSILWSGWASNSKYPLAGALRAVAQTISYEVTLAIILLSIMM 155
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_CANLU (NADH-ubiquinone oxidoreductase chain 1 OS=Canis lupus GN=MT-ND1 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.281e-23 Identity = 55/148 (37.16%), Postives = 91/148 (61.49%), Query Frame = 3 Query: 180 VLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++ I + V + +ER++ +Q R GP P G+LQ +AD KL KE L P + S+F + P +A+ L ++ +P Y L+ ++N+G+ +A+SS+A +L SG+ SN+KY+ +G LRA AQ+ISYE+ L + +LS+ L Sbjct: 10 IIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSMSMFILAPILALSLALTMWIPLPMPYPLI--NMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLL 155
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_CANFA (NADH-ubiquinone oxidoreductase chain 1 OS=Canis familiaris GN=MT-ND1 PE=3 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 1.281e-23 Identity = 55/148 (37.16%), Postives = 91/148 (61.49%), Query Frame = 3 Query: 180 VLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++ I + V + +ER++ +Q R GP P G+LQ +AD KL KE L P + S+F + P +A+ L ++ +P Y L+ ++N+G+ +A+SS+A +L SG+ SN+KY+ +G LRA AQ+ISYE+ L + +LS+ L Sbjct: 10 IIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSMSMFILAPILALSLALTMWIPLPMPYPLI--NMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLL 155
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_YERPY (NADH-quinone oxidoreductase subunit H OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=nuoH PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.674e-23 Identity = 58/161 (36.02%), Postives = 98/161 (60.87%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLRV 629 ++ VL + I ++ +T G + ER + Q R GP G LQ +AD K+ FKE+ +P + ++F++ P IA ++LLS+ ++P S +ADLNIGI ++ ++ +A +L +G+ SNNKYS LG +RA+AQ++SYE+ L L ++ + +V Sbjct: 12 LISVLKAVVILLVVVTCGAFMSFG-ERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWVPRFSDRAIFTLAPVIAFTSLLLSFAIVPVSPTWAVADLNIGILFFLMMAGLAVYAVLFAGWASNNKYSLLGAMRASAQTLSYEVFLGLSLMGVVAQV 171
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_ENT38 (NADH-quinone oxidoreductase subunit H OS=Enterobacter sp. (strain 638) GN=nuoH PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.674e-23 Identity = 57/157 (36.31%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +L +L + I ++ +T G + ER + Q R GP G LQ +AD K+ FKE+ +P + +F++ P IA ++LL++ ++P S V+ADLNIGI ++ ++ +A +L +G+ SNNKYS LG +RA+AQ++SYE+ L L ++ + Sbjct: 12 LLSILKAVVILLVVVTCGAFMSFG-ERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPTWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGV 167
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_CITK8 (NADH-quinone oxidoreductase subunit H OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=nuoH PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.674e-23 Identity = 57/157 (36.31%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +L +L + I ++ +T G + ER + Q R GP G LQ +AD K+ FKE+ +P + +F++ P IA ++LL++ ++P S V+ADLNIGI ++ ++ +A +L +G+ SNNKYS LG +RA+AQ++SYE+ L L ++ + Sbjct: 12 LLSILKAVVILLVVVTCGAFMSFG-ERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVPVSPTWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFLGLSLMGV 167
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_BART1 (NADH-quinone oxidoreductase subunit H OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=nuoH PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.674e-23 Identity = 53/158 (33.54%), Postives = 96/158 (60.76%), Query Frame = 3 Query: 150 LWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 L ++ + ++ + + V +++ +R+I A +Q R GP P G+LQ+ AD K + KE ++P+ N +F + P ++ L ++ VIP S +A +N+G+ +AISS+ G++M G+ SN+KY FLG LR+AAQ +SYE+ + ++++ L Sbjct: 13 LIIVGKTLLLLVVLLVLVAYLLYADRKIWAAVQLRRGPNVVGPWGLLQSFADLIKFVVKEPIIPAGANKGVFLLAPFVSATLALSTWAVIPVSEGWEVAKINVGLLYILAISSLEVYGVIMGGWASNSKYPFLGALRSAAQMVSYEVSIGFVLVTVIL 170 The following BLAST results are available for this feature:
BLAST of CK939407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939407 ID=CK939407; Name=CK939407; organism=Citrus sinensis; type=EST; length=887bpback to top |