CK939407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_BACTN (NADH-quinone oxidoreductase subunit H OS=Bacteroides thetaiotaomicron GN=nuoH PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.674e-23 Identity = 52/167 (31.14%), Postives = 100/167 (59.88%), Query Frame = 3 Query: 120 LESLQEVYGILWVLAPISIYVLAI-TIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 L + E + I + + ++A+ I +V++++ER++ Q R+GP G +Q + D K+L KE P + L+++ P + +IA L++ IPF+ + + N+G+F +A SSI +G+L++G+GSNNK+S +G +R+ AQ ISYE+ + + ++++ Sbjct: 16 LSVMPEGWAIFIECIAVGVCIVALYAILAIVLIYMERKVCGFFQCRLGPNRVGKWGSIQVICDVLKMLTKEIFTPKDADRFLYNLAPFMVIIASFLTFACIPFNKGAEILNFNVGVFFLLAASSIGVVGILLAGWGSNNKFSLIGAMRSGAQIISYELSVGMSIMTM 182
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_DINSE (NADH-ubiquinone oxidoreductase chain 1 OS=Dinodon semicarinatus GN=MT-ND1 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.674e-23 Identity = 56/150 (37.33%), Postives = 93/150 (62.00%), Query Frame = 3 Query: 174 IYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 +Y+L+I I V + LER++ +Q R GP P+G+LQ +ADG KL+ KE P+ + LF++ P +A+I L S+ +P L ++N+G+ +A+S + +L SG+ SN+KY +G +RA AQ ISYE+ L L ++S+++ Sbjct: 14 LYILSILIAVAFLTLLERKLLGYMQHRKGPNLVGPMGLLQPIADGLKLITKEATKPTMSSPILFTLSPIMALILALTSWAPMPMP--TPLTNMNLGLLFIMAMSGMFTYAILWSGWSSNSKYPLMGAMRAVAQIISYEVTLGLIIISMAI 161
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_CYCDI (NADH-ubiquinone oxidoreductase chain 1 OS=Cyclopes didactylus GN=MT-ND1 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.674e-23 Identity = 60/155 (38.71%), Postives = 94/155 (60.65%), Query Frame = 3 Query: 159 LAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 L IS ++ I + V + +ER+I +Q R GP P G+LQ +AD KL KE L P + LF+I P++A+ L ++ +P + L A+LN+G+ +A+SS+A +L SG+ SN+KY+ +G LRA AQ+ISYE+ L + +L +L Sbjct: 3 LTNISCLIIPILLAVAFLTLVERKILGYMQLRKGPNIVGPYGLLQPIADAIKLFTKEPLRPLTSSKLLFTIAPTLALSLALTLWIPLPMPHPL--ANLNLGMLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLHSNL 155
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_NITEU (NADH-quinone oxidoreductase subunit H OS=Nitrosomonas europaea GN=nuoH PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.186e-23 Identity = 64/172 (37.21%), Postives = 106/172 (61.63%), Query Frame = 3 Query: 144 GILWVLAPISIYVLAITIGVLVIV----WLEREISAGIQQRIGPEYASPLGIL------QALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPL---TLCVLSIS 620 G L++L + +LAI I +L+ V + ER+I A +Q R+GP + I Q +AD K + KE ++P+ N LF + P +A+ L ++ V+PFS LVLAD+N G+ +A++S+ G++++G+ SN+KY+FLG +R+AAQ +SYE+ + +CVL +S Sbjct: 18 GPLFLLIKNLLLILAIVIPLLLAVAYLTFAERKIIAYMQVRVGPNRVTFFDIPWLRGWGQPIADAVKAIMKEIIIPTGANKFLFLLAPVLAIGPALAAWAVVPFSPELVLADINAGLLYILAMTSLGVYGVIIAGWASNSKYAFLGAMRSAAQVVSYELAMGFALVCVLMMS 189
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_FRASC (NADH-quinone oxidoreductase subunit H OS=Frankia sp. (strain CcI3) GN=nuoH PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.186e-23 Identity = 58/165 (35.15%), Postives = 98/165 (59.39%), Query Frame = 3 Query: 150 LWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFS---------YNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 L +L ++++ + + + IV+ ER++ A +QQR+GP P G LQ+LADG KL+ KE+L+P + +F + P ++ + L++ VIPF L LADL + + +A +S+ GL++SG+ S + Y LG LR+AAQ ISYE+ + L +++ Sbjct: 28 LILLKAVAVFAFLLLMTLFAIVF-ERKVVAKMQQRVGPNRHGPRGWLQSLADGAKLMLKEDLIPVLADKPIFILAPIVSAVPAFLAFAVIPFGPEVSIFGERTTLQLADLPVSVLYLLAAASLGVYGLILSGWSSGSTYPLLGSLRSAAQIISYEVAMGLAFVAV 191
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_FLAJ1 (NADH-quinone oxidoreductase subunit H OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=nuoH PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.186e-23 Identity = 59/160 (36.88%), Postives = 94/160 (58.75%), Query Frame = 3 Query: 168 ISIYVLAIT-IGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVL---------ADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 + + V A+T I + W ER+++A +Q R+GP A G+LQ LADG KL KE P+ N LF +GP+IA+ L++ VIP+ L L D+NI + + S+ G+++ G+ SNNK+S +G +RAA+Q +SYEI + L ++++ Sbjct: 12 VIVVVFAVTMIMAMYSTWAERKVAAFLQDRVGPNRAGWGGLLQPLADGMKLFSKEEFFPNTPNRFLFVVGPAIAMSTALMTSAVIPWGDRLHLFGKDIILQATDVNIALLYIFGVLSVGVYGIMIGGWASNNKFSLMGAVRAASQMVSYEIAMGLSMIAL 171
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_BARQU (NADH-quinone oxidoreductase subunit H OS=Bartonella quintana GN=nuoH PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.186e-23 Identity = 52/159 (32.70%), Postives = 97/159 (61.01%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 +L ++ + ++ + + V +++ +R+I A +Q R GP P G+LQ+ AD K + KE ++P+ N +F + P ++ L ++ VIP + +A +N+G+ +AISS+ G++M G+ SN+KY FLG LR+AAQ +SYE+ + ++++ L Sbjct: 12 LLIIVGKTLLLLVVLLVLVAYLLYADRKIWAAVQLRRGPNVVGPWGLLQSFADLIKFVVKEPIIPAGANKGVFLLAPFVSATLALSTWAVIPVNEGWEVAKINVGLLYILAISSLEVYGVIMGGWASNSKYPFLGALRSAAQMVSYEVSIGFVLVTVIL 170
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_BACFR (NADH-quinone oxidoreductase subunit H OS=Bacteroides fragilis GN=nuoH PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.186e-23 Identity = 52/160 (32.50%), Postives = 96/160 (60.00%), Query Frame = 3 Query: 168 ISIYVLAITIGVLVI----------VWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +++++ + IGV ++ +++ER++ Q R+GP G +Q L D K+L KE + + L+++ P + +IA L++ +P S L + D N+G+F +A SSI +G+L++G+GSNNK+S +G +R+ AQ ISYE+ + L +L++ Sbjct: 23 LAVFIECVVIGVCIVALYAILAILLIYMERKVCGFFQCRLGPNRVGKWGSIQVLCDVLKMLTKEIIELKHSDKFLYNLAPFMVIIASFLTFSCLPISKGLEVLDFNVGVFFLLAASSIGVVGILLAGWGSNNKFSLIGAMRSGAQIISYELSVGLSILTM 182
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_BACFN (NADH-quinone oxidoreductase subunit H OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=nuoH PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.186e-23 Identity = 52/160 (32.50%), Postives = 96/160 (60.00%), Query Frame = 3 Query: 168 ISIYVLAITIGVLVI----------VWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 +++++ + IGV ++ +++ER++ Q R+GP G +Q L D K+L KE + + L+++ P + +IA L++ +P S L + D N+G+F +A SSI +G+L++G+GSNNK+S +G +R+ AQ ISYE+ + L +L++ Sbjct: 23 LAVFIECVVIGVCIVALYAILAILLIYMERKVCGFFQCRLGPNRVGKWGSIQVLCDVLKMLTKEIIELKHSDKFLYNLAPFMVIIASFLTFSCLPISKGLEVLDFNVGVFFLLAASSIGVVGILLAGWGSNNKFSLIGAMRSGAQIISYELSVGLSILTM 182
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_TADIN (NADH-ubiquinone oxidoreductase chain 1 OS=Tadarida insignis GN=MT-ND1 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.186e-23 Identity = 56/148 (37.84%), Postives = 92/148 (62.16%), Query Frame = 3 Query: 180 VLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++ I + V + +ER+I +Q R GP P G+LQ +AD KL KE L P ++++F + P +A+ L ++ +P Y L+ ++N+GI +A+SS+A +L SG+ SN+KY+ +G LRA AQ+ISYE+ L + +LS+ L Sbjct: 10 IIPILLAVAFLTLVERKILGYMQLRKGPNIVGPHGLLQPIADAIKLFTKEPLQPLTSSTTMFIMAPILALTLALTMWIPLPMPYPLI--NMNLGILFMLAMSSLAVYAILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLL 155 The following BLAST results are available for this feature:
BLAST of CK939407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK939407 ID=CK939407; Name=CK939407; organism=Citrus sinensis; type=EST; length=887bpback to top |