CK939407
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_RANCA (NADH-ubiquinone oxidoreductase chain 1 OS=Rana catesbeiana GN=MT-ND1 PE=3 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 2.186e-23 Identity = 56/146 (38.36%), Postives = 88/146 (60.27%), Query Frame = 3 Query: 174 IYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVL 611 +Y+ I + V + +ER+I +Q R GP P G+LQ +ADG KL KE + PS + LF + P++A+ ++ + PF + ++LN+ I +AISS+ +L SG+ SN+KY+ +G LRA AQ+ISYE+ L L +L Sbjct: 12 LYIAPILLAVAFLTLIERKILGYMQHRKGPNVVGPFGLLQPIADGVKLFIKEPIRPSTSSQLLFILAPTLALALAMIMW--TPFPLPIPYSNLNLSILFILAISSLTVYTILGSGWASNSKYALIGALRAVAQTISYEVTLALIIL 155
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_PHOVI (NADH-ubiquinone oxidoreductase chain 1 OS=Phoca vitulina GN=MT-ND1 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.186e-23 Identity = 54/148 (36.49%), Postives = 92/148 (62.16%), Query Frame = 3 Query: 180 VLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++ I + V + +ER++ +Q R GP P G+LQ +AD KL KE L P ++++F + P +A+ L ++ +P Y L+ ++N+G+ +A+SS+A +L SG+ SN+KY+ +G LRA AQ+ISYE+ L + +LS+ L Sbjct: 10 IIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSTTMFIMAPILALALALTMWVPLPMPYPLI--NMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLL 155
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_LEMCA (NADH-ubiquinone oxidoreductase chain 1 OS=Lemur catta GN=MT-ND1 PE=3 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 2.186e-23 Identity = 56/150 (37.33%), Postives = 93/150 (62.00%), Query Frame = 3 Query: 174 IYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 + ++ I + + + ER+I +Q R GP P G++Q AD KL KE L P +SSL++I P++A+ L++++ +P Y L+ ++N+G+ +A SS+A +L SG+ SN+KY+ +G LRA AQ+ISYE L + +LS+ L Sbjct: 8 LLIIPILLAMAFLTLAERKILGYMQLRKGPNVVGPHGMIQPFADAMKLFIKEPLRPLTSSSSLYTIAPTLALTIALVTWIPLPLPYPLI--NMNMGLLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEFTLAIILLSLLL 155
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_HIPDI (NADH-ubiquinone oxidoreductase chain 1 OS=Hipposideros diadema GN=MT-ND1 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.186e-23 Identity = 56/150 (37.33%), Postives = 91/150 (60.67%), Query Frame = 3 Query: 174 IYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 + ++ I + V + +ER++ +Q R GP P G+LQ +AD KL KE L P + S+F I P +A+ L + +P Y L+ ++N+G+ +A+SS+A +L SG+ SN+KY+ +G LRA AQ+ISYE+ L + +LS+ L Sbjct: 8 LMIVPILLAVAFLTLVERKVLGYMQLRKGPNVVGPYGLLQPIADAIKLFTKEPLRPLTSSISMFIIAPILALALALTMWTPLPMPYPLI--NMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLL 155
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_HALGR (NADH-ubiquinone oxidoreductase chain 1 OS=Halichoerus grypus GN=MT-ND1 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.186e-23 Identity = 54/148 (36.49%), Postives = 92/148 (62.16%), Query Frame = 3 Query: 180 VLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 ++ I + V + +ER++ +Q R GP P G+LQ +AD KL KE L P ++++F + P +A+ L ++ +P Y L+ ++N+G+ +A+SS+A +L SG+ SN+KY+ +G LRA AQ+ISYE+ L + +LS+ L Sbjct: 10 IIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSTTMFIMAPILALTLALTMWVPLPMPYPLI--NMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLL 155
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_DIDMA (NADH-ubiquinone oxidoreductase chain 1 OS=Didelphis marsupialis virginiana GN=MT-ND1 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.186e-23 Identity = 58/155 (37.42%), Postives = 92/155 (59.35%), Query Frame = 3 Query: 159 LAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 L + +Y++ I + V + +ER++ +Q R GP P GILQ AD KL KE L P + S+F+I P++A+ + +P L+ DLN+G+ +A+S ++ +L SG+ SN+KY+ +G LRA AQ+ISYE+ L + +LSI L Sbjct: 3 LINLLMYIIPILLAVAFLTLVERKVLGYMQFRKGPNVIGPYGILQPFADALKLFIKEPLRPMTSSISMFTIAPTLALTLAFTIWTPLPMPNALL--DLNLGLLFILALSGLSVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIML 155
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_BALPH (NADH-ubiquinone oxidoreductase chain 1 OS=Balaenoptera physalus GN=MT-ND1 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.186e-23 Identity = 57/148 (38.51%), Postives = 91/148 (61.49%), Query Frame = 3 Query: 180 VLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 +L I + V + +ER+I +Q R GP P G+LQ AD KL KE L P+ ++++F I P +A+ L + +P Y L+ ++N+G+ +A+SS+A +L SG+ SN+KY+ +G LRA AQ+ISYE+ L + +LS+ L Sbjct: 10 ILPILLAVAFLTLVERKILGYMQFRKGPNIVGPHGLLQPFADAIKLFTKEPLRPATSSTTMFIIAPVLALTLALTMWSPLPMPYPLI--NMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLL 155
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NU1M_BALMU (NADH-ubiquinone oxidoreductase chain 1 OS=Balaenoptera musculus GN=MT-ND1 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.186e-23 Identity = 57/148 (38.51%), Postives = 91/148 (61.49%), Query Frame = 3 Query: 180 VLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 +L I + V + +ER+I +Q R GP P G+LQ AD KL KE L P+ ++++F I P +A+ L + +P Y L+ ++N+G+ +A+SS+A +L SG+ SN+KY+ +G LRA AQ+ISYE+ L + +LS+ L Sbjct: 10 ILPILLAVAFLTLVERKILGYMQFRKGPNIVGPHGLLQPFADAIKLFTKEPLRPATSSTTMFIIAPVLALALALTMWSPLPMPYPLI--NMNLGVLFMLAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLL 155
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: FPOH_METMA (F(420)H(2) oxidoreductase subunit H OS=Methanosarcina mazei GN=fpoH PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.186e-23 Identity = 57/166 (34.34%), Postives = 93/166 (56.02%), Query Frame = 3 Query: 153 WVLAPISIYVL-AITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFS--------YNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISL 623 W+ + + ++ AI +G + VW+ER++SA IQ R GP G+LQ +AD KL KE++ P + L+ P + ++ L + IP Y L + +++I I A+S+I G+ M+ YGSNNKYS LG R A+ I YE+PL + ++S+++ Sbjct: 18 WIRGTVGLVLVGAIFLGGMAAVWIERKLSADIQLRYGPSRVGKFGLLQLVADAIKLFTKEDVRPGNADRFLYDNAPVFMLTSLFLMLVAIPVGAVFIDGNLYPLAVTEMDISILFIEAVSAINIFGIFMAAYGSNNKYSLLGAFRNFARMIGYEVPLGIAIVSVAV 183
BLAST of CK939407 vs. ExPASy Swiss-Prot
Match: NUOH_YERPS (NADH-quinone oxidoreductase subunit H OS=Yersinia pseudotuberculosis GN=nuoH PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.855e-23 Identity = 57/157 (36.31%), Postives = 96/157 (61.15%), Query Frame = 3 Query: 147 ILWVLAPISIYVLAITIGVLVIVWLEREISAGIQQRIGPEYASPLGILQALADGTKLLFKENLLPSRGNSSLFSIGPSIAVIAILLSYLVIPFSYNLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSI 617 ++ VL + I ++ +T G + ER + Q R GP G LQ +AD K+ FKE+ +P + ++F++ P IA ++LLS+ ++P S +ADLNIGI ++ ++ +A +L +G+ SNNKYS LG +RA+AQ++SYE+ L L ++ + Sbjct: 12 LISVLKAVVILLVVVTCGAFMSFG-ERRLLGLFQNRYGPNRVGWGGSLQLVADMIKMFFKEDWVPRFSDRAIFTLAPVIAFTSLLLSFAIVPVSPTWAVADLNIGILFFLMMAGLAVYAVLFAGWASNNKYSLLGAMRASAQTLSYEVFLGLSLMGV 167 The following BLAST results are available for this feature:
BLAST of CK939407 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939407 ID=CK939407; Name=CK939407; organism=Citrus sinensis; type=EST; length=887bpback to top |