CK938363
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK938363 vs. ExPASy Swiss-Prot
Match: IAA6_ARATH (Auxin-responsive protein IAA6 OS=Arabidopsis thaliana GN=IAA6 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.244e-11 Identity = 28/41 (68.29%), Postives = 36/41 (87.80%), Query Frame = 1 Query: 10 EFVLAYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIG 132 E+++ YEDKD DWMLVGDVPW+MF ++CKRLRI+K +DA G Sbjct: 143 EYIIIYEDKDRDWMLVGDVPWQMFKESCKRLRIVKRSDATG 183
BLAST of CK938363 vs. ExPASy Swiss-Prot
Match: IAA1_ARATH (Auxin-responsive protein IAA1 OS=Arabidopsis thaliana GN=IAA1 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 1.625e-11 Identity = 29/41 (70.73%), Postives = 35/41 (85.37%), Query Frame = 1 Query: 4 GSEFVLAYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDA 126 GS FV YEDKDGDWMLVGDVPW+MF +C++LRIMK ++A Sbjct: 124 GSGFVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSEA 164
BLAST of CK938363 vs. ExPASy Swiss-Prot
Match: IAA11_ARATH (Auxin-responsive protein IAA11 OS=Arabidopsis thaliana GN=IAA11 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.625e-11 Identity = 31/46 (67.39%), Postives = 37/46 (80.43%), Query Frame = 1 Query: 1 GGSEFVLAYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLA 138 G S VL YEDK+GDWMLVGDVPW MFI + +RLRIMK+++A G A Sbjct: 197 GSSGLVLTYEDKEGDWMLVGDVPWGMFIGSVRRLRIMKTSEATGKA 242
BLAST of CK938363 vs. ExPASy Swiss-Prot
Match: IAA24_ORYSJ (Auxin-responsive protein IAA24 OS=Oryza sativa subsp. japonica GN=IAA24 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.122e-11 Identity = 29/39 (74.36%), Postives = 35/39 (89.74%), Query Frame = 1 Query: 10 EFVLAYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDA 126 +F +AYEDKDGD MLVGDVPWEMFI +CK+LRIMK ++A Sbjct: 180 QFAIAYEDKDGDLMLVGDVPWEMFISSCKKLRIMKGSEA 218
BLAST of CK938363 vs. ExPASy Swiss-Prot
Match: IAA10_ARATH (Auxin-responsive protein IAA10 OS=Arabidopsis thaliana GN=IAA10 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.620e-11 Identity = 27/45 (60.00%), Postives = 37/45 (82.22%), Query Frame = 1 Query: 1 GGSEFVLAYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGL 135 G SE+++ Y+DKDGDWMLVGDVPW+MF+ + RLRIMK++ G+ Sbjct: 215 GSSEYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRIMKTSIGAGV 259
BLAST of CK938363 vs. ExPASy Swiss-Prot
Match: IAA12_ORYSJ (Auxin-responsive protein IAA12 OS=Oryza sativa subsp. japonica GN=IAA12 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.175e-11 Identity = 31/50 (62.00%), Postives = 41/50 (82.00%), Query Frame = 1 Query: 7 SEFVLAYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGL-APRAVE 153 SEF + Y+DKDGD MLVGDVP++MF TCK+LRIMK ++A GL +PR ++ Sbjct: 176 SEFAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPRQMK 225
BLAST of CK938363 vs. ExPASy Swiss-Prot
Match: IAA5_ARATH (Auxin-responsive protein IAA5 OS=Arabidopsis thaliana GN=IAA5 PE=2 SV=3) HSP 1 Score: 67.0106 bits (162), Expect = 8.065e-11 Identity = 29/36 (80.56%), Postives = 31/36 (86.11%), Query Frame = 1 Query: 7 SEFVLAYEDKDGDWMLVGDVPWEMFIDTCKRLRIMK 114 SE V YEDKDGDWML GDVPWEMF+ +CKRLRIMK Sbjct: 122 SECVPIYEDKDGDWMLAGDVPWEMFLGSCKRLRIMK 157 The following BLAST results are available for this feature:
BLAST of CK938363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938363 ID=CK938363; Name=CK938363; organism=Citrus sinensis; type=EST; length=596bpback to top |