CK938363
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938363 vs. ExPASy Swiss-Prot
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 3.267e-20 Identity = 42/52 (80.77%), Postives = 49/52 (94.23%), Query Frame = 1 Query: 4 GSEFVLAYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRAVEKC 159 GSE+V YEDKDGDWMLVGDVPWEMF+++CKRLRIMK ++AIGLAPRA+EKC Sbjct: 222 GSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKC 273
BLAST of CK938363 vs. ExPASy Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.266e-20 Identity = 41/52 (78.85%), Postives = 49/52 (94.23%), Query Frame = 1 Query: 4 GSEFVLAYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRAVEKC 159 GS++V YEDKDGDWMLVGDVPWEMF+D+CKR+RIMK ++AIGLAPRA+EKC Sbjct: 181 GSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALEKC 232
BLAST of CK938363 vs. ExPASy Swiss-Prot
Match: IAA11_ORYSJ (Auxin-responsive protein IAA11 OS=Oryza sativa subsp. japonica GN=IAA11 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.117e-19 Identity = 41/50 (82.00%), Postives = 47/50 (94.00%), Query Frame = 1 Query: 10 EFVLAYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRAVEKC 159 E+V YEDKDGDWMLVGDVPWEMF+++CKRLRIMK ++AIGLAPRAVEKC Sbjct: 182 EYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAVEKC 231
BLAST of CK938363 vs. ExPASy Swiss-Prot
Match: IAA17_ARATH (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 2.765e-19 Identity = 40/50 (80.00%), Postives = 47/50 (94.00%), Query Frame = 1 Query: 10 EFVLAYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRAVEKC 159 ++V +YEDKDGDWMLVGDVPW MF+DTCKRLR+MK +DAIGLAPRA+EKC Sbjct: 176 DYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLAPRAMEKC 225
BLAST of CK938363 vs. ExPASy Swiss-Prot
Match: IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.612e-19 Identity = 41/52 (78.85%), Postives = 48/52 (92.31%), Query Frame = 1 Query: 4 GSEFVLAYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRAVEKC 159 GSE+V+ YEDKD DWMLVGDVPWEMFI +CK+LRIMKS++AIGLAPR +EKC Sbjct: 250 GSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAPRVMEKC 301
BLAST of CK938363 vs. ExPASy Swiss-Prot
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.792e-18 Identity = 39/50 (78.00%), Postives = 48/50 (96.00%), Query Frame = 1 Query: 7 SEFVLAYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRAVEK 156 SE+V +YEDKDGDWMLVGDVPWEMF+++CKRLRIMK ++A+GLAPRA+EK Sbjct: 188 SEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRAMEK 237
BLAST of CK938363 vs. ExPASy Swiss-Prot
Match: IAA3_ORYSJ (Auxin-responsive protein IAA3 OS=Oryza sativa subsp. japonica GN=IAA3 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.792e-18 Identity = 41/49 (83.67%), Postives = 45/49 (91.84%), Query Frame = 1 Query: 10 EFVLAYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRAVEK 156 E+VL YEDKDGDWMLVGDVPWEMF D+C+RLRIMK +DAIGLAPRA EK Sbjct: 210 EYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSDAIGLAPRAGEK 258
BLAST of CK938363 vs. ExPASy Swiss-Prot
Match: IAA8_ARATH (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana GN=IAA8 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.341e-18 Identity = 40/51 (78.43%), Postives = 47/51 (92.16%), Query Frame = 1 Query: 4 GSEFVLAYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRAVEK 156 GSEFVL YEDKDGDWMLVGDVPWE+F +TC++L+IMK +D+IGLAP AVEK Sbjct: 264 GSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAPGAVEK 314
BLAST of CK938363 vs. ExPASy Swiss-Prot
Match: IAA17_ORYSJ (Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica GN=IAA17 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.341e-18 Identity = 40/49 (81.63%), Postives = 46/49 (93.88%), Query Frame = 1 Query: 10 EFVLAYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRAVEK 156 E+VL YEDKDGDWMLVGDVPWEMF ++C+RLRIMK +DAIGLAPRAV+K Sbjct: 204 EYVLTYEDKDGDWMLVGDVPWEMFANSCRRLRIMKGSDAIGLAPRAVDK 252
BLAST of CK938363 vs. ExPASy Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 6.811e-18 Identity = 39/50 (78.00%), Postives = 47/50 (94.00%), Query Frame = 1 Query: 7 SEFVLAYEDKDGDWMLVGDVPWEMFIDTCKRLRIMKSTDAIGLAPRAVEK 156 SE+V +YEDKDGDWMLVGDVPW MF+++CKRLRIMK ++AIGLAPRA+EK Sbjct: 174 SEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAMEK 223 The following BLAST results are available for this feature:
BLAST of CK938363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938363 ID=CK938363; Name=CK938363; organism=Citrus sinensis; type=EST; length=596bpback to top |