CX043405
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043405 vs. ExPASy Swiss-Prot
Match: DUSA_PSESM (tRNA-dihydrouridine synthase A OS=Pseudomonas syringae pv. tomato GN=dusA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.884e-35 Identity = 77/176 (43.75%), Postives = 106/176 (60.23%), Query Frame = -2 Query: 198 HPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAY 725 HP+ LQ+GGS LA LA A YDE+NLN GCPS +V + G LM P+ V + + + +PV+VK RIG++ DSY +LCDF+ V + F +H+R A+L G+SP ENR IPPL+Y+ L DFP+L LNGGI T+++ + L+ VM+GR AY Sbjct: 72 HPLALQLGGSTAAGLAACARLAEAAGYDEVNLNVGCPSDRVQNN-MIGACLMAHPQLVADCVKAMRDAVGIPVTVKHRIGINGRDSYAELCDFVGTVHDAG-CQSFTVHARIAILEGLSPKENRDIPPLRYDVVAQLKTDFPELEIVLNGGIKTLEQCSEHLQT-FDGVMLGREAY 244
BLAST of CX043405 vs. ExPASy Swiss-Prot
Match: DUSA_PSEAE (tRNA-dihydrouridine synthase A OS=Pseudomonas aeruginosa GN=dusA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.905e-34 Identity = 78/176 (44.32%), Postives = 103/176 (58.52%), Query Frame = -2 Query: 198 HPIVLQIGGSNLDNLAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVSVKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYYYALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAY 725 HP+ LQ+GGS LA LA YDE+NLN GCPS +V H G LM P V + + + + V+VK RIG++ DSY +LCDF+ +V R F +H+R A+L G+SP ENR +PPL+YE L +DFPDL LNGGI T++ L+ VM+GR AY Sbjct: 68 HPLALQLGGSVPAELAACARLAEEAGYDEVNLNVGCPSDRVQ-HNMIGACLMGHPALVADCVKAMLDAVEIAVTVKHRIGINGRDSYAELCDFVGQVREAG-CRSFTVHARIAILEGLSPKENREVPPLRYEVAAQLKKDFPDLEIVLNGGIKTLEACREHLQT-FDGVMLGREAY 240 The following BLAST results are available for this feature:
BLAST of CX043405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043405 ID=CX043405; Name=CX043405; organism=Citrus sinensis; type=EST; length=771bpback to top |