EY665812
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665812 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 297.745 bits (761), Expect = 2.643e-83 Identity = 154/204 (75.49%), Postives = 171/204 (83.82%), Query Frame = 3 Query: 81 GAATSVPSSSFFGTSLKKVSSRIPPSKVPSAS---FKITA-EVNENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAPDIIREGK 680 GA S P++ F G LKK + S++ FK+ A E++E KQT QDRWKGLAYD SDDQQDITRGKG VDSLFQAP G GTH AV+SSY+Y+SQGLRTY+ DNT+ G YIAPAFMDKLVVHI+KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA DII++GK Sbjct: 10 GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSNINRFKVMAKELDEGKQTDQDRWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGK 212 HSP 2 Score: 33.4982 bits (75), Expect = 2.643e-83 Identity = 17/31 (54.84%), Postives = 19/31 (61.29%), Query Frame = 1 Query: 673 KGKMCCLLINDLECRSWSYGGEPPNTQVKNQ 765 KGKMCCL INDL+ + GG T V NQ Sbjct: 210 KGKMCCLFINDLDAGAGRMGGTTQYT-VNNQ 239
BLAST of EY665812 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 292.738 bits (748), Expect = 1.192e-80 Identity = 152/208 (73.08%), Postives = 170/208 (81.73%), Query Frame = 3 Query: 81 GAATSVPS-SSFFGTSLKK--VSSRIP---PSKVPSASFKITA--EVNENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAPDIIREGK 680 GA S P+ SSF G L K VS+ + S ++ FK A EV+E KQT +DRWKGLAYD SDDQQDITRGKG VD+LFQAPMG GTH AV+SSYDYISQG ++YN DN +DG YIA FMDKLVVH++KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGI PIMMSAGELESGNAGEPAKLIRQRYREA D+I++GK Sbjct: 10 GAPASTPTRSSFLGKKLNKPQVSAAVTYHGKSSSSNSRFKAMAAKEVDETKQTDEDRWKGLAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNFDNMMDGFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELESGNAGEPAKLIRQRYREASDLIKKGK 217 HSP 2 Score: 29.6462 bits (65), Expect = 1.192e-80 Identity = 16/31 (51.61%), Postives = 18/31 (58.06%), Query Frame = 1 Query: 673 KGKMCCLLINDLECRSWSYGGEPPNTQVKNQ 765 KGKM CL INDL+ + GG T V NQ Sbjct: 215 KGKMSCLFINDLDAGAGRMGGTTQYT-VNNQ 244
BLAST of EY665812 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 285.804 bits (730), Expect = 9.991e-80 Identity = 148/203 (72.91%), Postives = 166/203 (81.77%), Query Frame = 3 Query: 81 GAATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITA---EVNENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAPDIIREGK 680 GA S P+ F G +K +K+ S ++ A E+++ KQT DRWKGLAYD SDDQQDITRGKG VDSLFQAPMG GTH A++SSY+YISQGLR Y+ DNT+DGLYIAPAFMDKL+VH+ KNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN GEPAKLIRQRYREA DII +GK Sbjct: 10 GAPASTPTI-FLGKKVKNYYHG--GNKMKSRVVRVMAAKKELDQGKQTDADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN-GEPAKLIRQRYREAADIINKGK 208 HSP 2 Score: 33.4982 bits (75), Expect = 9.991e-80 Identity = 17/31 (54.84%), Postives = 19/31 (61.29%), Query Frame = 1 Query: 673 KGKMCCLLINDLECRSWSYGGEPPNTQVKNQ 765 KGKMCCL INDL+ + GG T V NQ Sbjct: 206 KGKMCCLFINDLDAGAGRMGGTTQYT-VNNQ 235
BLAST of EY665812 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 2.216e-79 Identity = 146/203 (71.92%), Postives = 166/203 (81.77%), Query Frame = 3 Query: 81 GAATSVPSSSFFGTSLKK-VSSRIPPSKVPSASFKITAEVNENKQTKQ--DRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAPDIIREGK 680 GA S P++ F G LKK V+S + S + + T EN K+ D+WKGLAYD SDDQQDITRGKG VDSLFQAP G GTH AV+SSY+Y+SQGLR Y+ DNT+ G YIAPAFMDKLVVH++KNFM+LPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA D+I++GK Sbjct: 10 GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGK 211 HSP 2 Score: 33.4982 bits (75), Expect = 2.216e-79 Identity = 17/31 (54.84%), Postives = 19/31 (61.29%), Query Frame = 1 Query: 673 KGKMCCLLINDLECRSWSYGGEPPNTQVKNQ 765 KGKMCCL INDL+ + GG T V NQ Sbjct: 209 KGKMCCLFINDLDAGAGRMGGTTQYT-VNNQ 238
BLAST of EY665812 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 284.263 bits (726), Expect = 1.856e-78 Identity = 143/211 (67.77%), Postives = 164/211 (77.73%), Query Frame = 3 Query: 48 AAAVPLSFNGSGAATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVNENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAPDIIREGK 680 A PL+ NGS A SVP+S F G+SLKK ++ PS + S + A NE K T D+W LA D SDDQ DI RGKG VDSLFQAP GTH + SS++Y SQGLR Y++DN + YIAPAFMDKLVVHITKNF++LPNIK+PLILG+WGGKGQGKSFQCELVFAK+GINPIMMSAGELESGNAGEPAKLIRQRYREA D+I +GK Sbjct: 11 ATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSSSRTTSMTVKAAENEEKNT--DKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGK 219 HSP 2 Score: 30.8018 bits (68), Expect = 1.856e-78 Identity = 18/34 (52.94%), Postives = 19/34 (55.88%), Query Frame = 1 Query: 664 LSGKGKMCCLLINDLECRSWSYGGEPPNTQVKNQ 765 L KGKMC L INDLE + GG T V NQ Sbjct: 214 LIAKGKMCALFINDLEPGAGRMGGTTQYT-VNNQ 246
BLAST of EY665812 vs. ExPASy Swiss-Prot
Match: RCA_CHLRE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.472e-53 Identity = 106/183 (57.92%), Postives = 131/183 (71.58%), Query Frame = 3 Query: 141 SRIPPSKVPSASFKITAEVNENKQTKQDRWKGL--AYDESDDQQDITRGKGAVDSLFQAPMGTG-THYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAPDIIREGK 680 +R+ V A ++ A + + RW+ + D SDDQQDITRG+ VD LFQ G G TH AV+SS +Y+SQ ++N N DG YI+PAF+DK+ +HI KNFM LP IKVPLILGIWGGKGQGK+FQC L + K+GI PI+MSAGELESGNAGEPAKLIR RYREA DII++G+ Sbjct: 18 ARVATRSVRRAQLQVVAP----SRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKKLGIAPIVMSAGELESGNAGEPAKLIRTRYREASDIIKKGR 194 HSP 2 Score: 25.7942 bits (55), Expect = 1.472e-53 Identity = 14/31 (45.16%), Postives = 17/31 (54.84%), Query Frame = 1 Query: 673 KGKMCCLLINDLECRSWSYGGEPPNTQVKNQ 765 KG+MC L INDL+ + G T V NQ Sbjct: 192 KGRMCSLFINDLDAGAGRMGDTTQYT-VNNQ 221
BLAST of EY665812 vs. ExPASy Swiss-Prot
Match: RCA_ANASC (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain CA / ATCC 33047) GN=rca PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 9.745e-29 Identity = 56/87 (64.37%), Postives = 72/87 (82.76%), Query Frame = 3 Query: 411 YIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAPDIIR 671 YIAP F+DKL VHITKNF++LP ++VPLILGI G KG+GK+FQCEL F KMG+ ++S GELES +AG+PA+LIR RYRE ++I+ Sbjct: 4 YIAPRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEKMGVEVTLISGGELESPDAGDPARLIRLRYRETAELIK 90 HSP 2 Score: 25.409 bits (54), Expect = 9.745e-29 Identity = 9/13 (69.23%), Postives = 12/13 (92.31%), Query Frame = 1 Query: 673 KGKMCCLLINDLE 711 +GKMC L+INDL+ Sbjct: 92 RGKMCVLMINDLD 104
BLAST of EY665812 vs. ExPASy Swiss-Prot
Match: RCA_ANASP (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain PCC 7120) GN=rca PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.269e-28 Identity = 56/87 (64.37%), Postives = 72/87 (82.76%), Query Frame = 3 Query: 411 YIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAPDIIR 671 YIAP F+DKL VHITKNF+++P ++VPLILGI G KG+GK+FQCEL F KMGI ++S GELES +AG+PA+LIR RYRE ++I+ Sbjct: 4 YIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEKMGIEVTLISGGELESPDAGDPARLIRLRYRETAELIK 90 HSP 2 Score: 25.409 bits (54), Expect = 1.269e-28 Identity = 9/13 (69.23%), Postives = 12/13 (92.31%), Query Frame = 1 Query: 673 KGKMCCLLINDLE 711 +GKMC L+INDL+ Sbjct: 92 RGKMCVLMINDLD 104
BLAST of EY665812 vs. ExPASy Swiss-Prot
Match: RCA_ARAHY (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (Fragments) OS=Arachis hypogaea GN=RCA PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.773e-27 Identity = 75/133 (56.39%), Postives = 77/133 (57.89%), Query Frame = 3 Query: 234 GLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKL 632 GLAYD SDDQQDITRG VDSLFQAPM GTHYAVMSSY+YISQGLR VPLILGIWGG KMGINPIMMSAGELESGNAGEPAK+ Sbjct: 1 GLAYDISDDQQDITRGM--VDSLFQAPMNDGTHYAVMSSYEYISQGLR------------------------------------VPLILGIWGG--------------KMGINPIMMSAGELESGNAGEPAKM 81 The following BLAST results are available for this feature:
BLAST of EY665812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665812 ID=EY665812; Name=EY665812; organism=Citrus sinensis; type=EST; length=821bpback to top |