EY665812
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665812 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 335.495 bits (859), Expect = 1.285e-94 Identity = 168/209 (80.38%), Postives = 188/209 (89.95%), Query Frame = 3 Query: 60 PLSFNGSGAATS-VPSSSFFGTSLKKVSSRIPPSKVPSASFKITA-EVNENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAPDIIREGK 680 PLS NGSGA S VPS++FFG+SLKK +++ P K S +FKI A E++E++QT +D+WKGLAYD SDDQQDITRGKG VD+LFQAPM +GTHYAVMSSYDYISQGLR YNLDN +DG YIAPAFMDKLVVHITKNF+SLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA DII++GK Sbjct: 15 PLSLNGSGARASLVPSTAFFGSSLKKSAAKFP--KASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGK 221 HSP 2 Score: 33.4982 bits (75), Expect = 1.285e-94 Identity = 17/31 (54.84%), Postives = 19/31 (61.29%), Query Frame = 1 Query: 673 KGKMCCLLINDLECRSWSYGGEPPNTQVKNQ 765 KGKMCCL INDL+ + GG T V NQ Sbjct: 219 KGKMCCLFINDLDAGAGRMGGTTQYT-VNNQ 248
BLAST of EY665812 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 335.495 bits (859), Expect = 1.286e-94 Identity = 168/209 (80.38%), Postives = 188/209 (89.95%), Query Frame = 3 Query: 60 PLSFNGSGAATS-VPSSSFFGTSLKKVSSRIPPSKVPSASFKITA-EVNENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAPDIIREGK 680 PLS NGSGA S VPS++FFG+SLKK +++ P K S +FKI A E++E++QT +D+WKGLAYD SDDQQDITRGKG VD+LFQAPM +GTHYAVMSSYDYISQGLR YNLDN +DG YIAPAFMDKLVVHITKNF+SLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA DII++GK Sbjct: 15 PLSLNGSGARASLVPSTAFFGSSLKKSAAKFP--KASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGK 221 HSP 2 Score: 33.4982 bits (75), Expect = 1.286e-94 Identity = 17/31 (54.84%), Postives = 19/31 (61.29%), Query Frame = 1 Query: 673 KGKMCCLLINDLECRSWSYGGEPPNTQVKNQ 765 KGKMCCL INDL+ + GG T V NQ Sbjct: 219 KGKMCCLFINDLDAGAGRMGGTTQYT-VNNQ 248
BLAST of EY665812 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 333.954 bits (855), Expect = 4.076e-93 Identity = 163/207 (78.74%), Postives = 183/207 (88.41%), Query Frame = 3 Query: 60 PLSFNGSGAATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVNENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAPDIIREGK 680 P + NGS ++ SVPSS+F G+SLKKV+SR SKV S S +I A V+E+KQT +DRWKGLA+D SDDQQDITRGKG VDSLFQAP G+GTH+A+MSSY+YIS GLR YN DN +DG YIAPAFMDKLVVHITKNFM+LPN+KVPLILGIWGGKGQGKSFQCELVFAKM I+PIMMSAGELESGNAGEPAKLIRQRYREA DIIR+GK Sbjct: 15 PPNLNGSSSSASVPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGK 221 HSP 2 Score: 30.0314 bits (66), Expect = 4.076e-93 Identity = 16/31 (51.61%), Postives = 18/31 (58.06%), Query Frame = 1 Query: 673 KGKMCCLLINDLECRSWSYGGEPPNTQVKNQ 765 KGKMC L INDL+ + GG T V NQ Sbjct: 219 KGKMCALFINDLDAGAGRLGGTTQYT-VNNQ 248
BLAST of EY665812 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 325.865 bits (834), Expect = 6.366e-91 Identity = 166/210 (79.05%), Postives = 182/210 (86.67%), Query Frame = 3 Query: 63 LSFNGSGAATSVPSSSFFGTSLKK-VSSRIPPSKVPSASFKITA---EVNENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAPDIIREGK 680 L+ NGSGA S P+S+FFGTSLKK V+SR+P SKV + SFKI A E+ E++QT +DRWKGLAYD SDDQQDITRGKG VD LFQAPM GTHYAVMSSY+Y+S GLR LDN DG YIAPAF+DKLVVHITKNFM+LPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA D+I +GK Sbjct: 16 LNLNGSGAGASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLR--QLDNIKDGFYIAPAFLDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGK 223 HSP 2 Score: 30.8018 bits (68), Expect = 6.366e-91 Identity = 17/34 (50.00%), Postives = 19/34 (55.88%), Query Frame = 1 Query: 664 LSGKGKMCCLLINDLECRSWSYGGEPPNTQVKNQ 765 L KGKMC L INDL+ + GG T V NQ Sbjct: 218 LIAKGKMCALFINDLDAGAGRLGGTTQYT-VNNQ 250
BLAST of EY665812 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 319.701 bits (818), Expect = 6.962e-90 Identity = 164/222 (73.87%), Postives = 184/222 (82.88%), Query Frame = 3 Query: 45 MAAAV---------PLSFNGSGA-ATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVNENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAPDIIREGK 680 MAAAV PLS NGSG+ A S P+S+F G + VS +K + SFK+ A V E+KQT DRW+GLAYD SDDQQDITRGKG VDS+FQAPMGTGTH+AV+SSY+Y+SQGLR YNLDN +DG YIAPAFMDKLVVHITKNF++LPNIKVPLILGIWGGKGQGKSFQCELV AKMGINPIMMSAGELESGNAGEPAKLIRQRYREA D+I++GK Sbjct: 1 MAAAVSTVGAINRAPLSLNGSGSGAVSAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLA-VKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGK 221 HSP 2 Score: 33.4982 bits (75), Expect = 6.962e-90 Identity = 17/31 (54.84%), Postives = 19/31 (61.29%), Query Frame = 1 Query: 673 KGKMCCLLINDLECRSWSYGGEPPNTQVKNQ 765 KGKMCCL INDL+ + GG T V NQ Sbjct: 219 KGKMCCLFINDLDAGAGRMGGTTQYT-VNNQ 248
BLAST of EY665812 vs. ExPASy Swiss-Prot
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 328.176 bits (840), Expect = 3.466e-89 Identity = 172/236 (72.88%), Postives = 192/236 (81.36%), Query Frame = 3 Query: 63 LSFNGSGAATSVPSSSFFGTSLKKV-SSRIPPSKVPSASFKITA---EVNENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAPDIIREGKNVLPL--DQ*S*MQKLVLWGGTPQYT 752 L+ NGSG S PSS+FFGTSLKKV SSR+P SK+ S SFKI A E+ E +QT+ DRW+GLAYD SDDQQDITRGKG VDSLFQAPM GTHYAV+SS+ Y+S GLR YN DN DG YIAPAF+DKLVVHI KNFM+LPNIKVPLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA D+I++GK + D + +L GGT QYT Sbjct: 16 LNLNGSGGGASGPSSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAYDVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREASDLIKKGKMCVLFINDLDAGAGRL---GGTTQYT 248
BLAST of EY665812 vs. ExPASy Swiss-Prot
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 311.612 bits (797), Expect = 1.850e-87 Identity = 154/214 (71.96%), Postives = 177/214 (82.71%), Query Frame = 3 Query: 39 SLMAAAVPLSFNGSGAATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVNENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAPDIIREGK 680 S + A + N S VP+S+F G+ LK VSSR SK+ + +FKI AE +E KQT++D+W+GLA+D SDDQQDITRGKG D LFQAPMGTGTH AV+SSY+YIS GLR Y+ DN +DG YIAPAFMDKL VHI KNF++LPNIKVPLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA DII++GK Sbjct: 6 STIGAVNRTTLNNSNYGGLVPNSAFLGSRLK-VSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGK 218 HSP 2 Score: 33.4982 bits (75), Expect = 1.850e-87 Identity = 17/31 (54.84%), Postives = 19/31 (61.29%), Query Frame = 1 Query: 673 KGKMCCLLINDLECRSWSYGGEPPNTQVKNQ 765 KGKMCCL INDL+ + GG T V NQ Sbjct: 216 KGKMCCLFINDLDAGAGRLGGTTQYT-VNNQ 245
BLAST of EY665812 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 317.39 bits (812), Expect = 6.119e-86 Identity = 168/235 (71.49%), Postives = 185/235 (78.72%), Query Frame = 3 Query: 60 PLSFNGSGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITAE---VNENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAPDIIREGKNVLPLDQ*S*MQKLVLWGGTPQYT 752 PLS N S A TSVPS++FFG +LKKV + + KV + S +I AE V+ KQT DRWKGL D SDDQQDITRGKG VDSLFQAP GTGTH+AV+ SY+Y+SQGLR YNLDN +DG YIAPAFMDKLVVHITKNF+ LPNIKVPLILGIWGGKGQGKSFQCELVF KMGINPIMMSAGELESGNAGEPAKLIRQRYREA +IIR+G N+ L GGT QYT Sbjct: 15 PLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRIVAEQIDVDPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKG-NMCCLFINDLDAGAGRMGGTTQYT 248
BLAST of EY665812 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 3.966e-85 Identity = 165/239 (69.04%), Postives = 185/239 (77.41%), Query Frame = 3 Query: 48 AAAVPLSFNGSGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITAEVNE---NKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAPDIIREGKNVLPLDQ*S*MQKLVLWGGTPQYT 752 A PLS N S A TSVPS++FFG +LKKV + + KV + S +I AE + KQT DRWKGL D SDDQQDI RGKG VDSLFQAP GTGTH+AV+ SY+Y+SQGLR YN+DNT+DG YIAP+FMDKLVVHITKNF+ LPNIKVPLILG+WGGKGQGKSFQCELVF KMGINPIMMSAGELESGNAGEPAKLIRQRYREA +IIR+G N+ L GGT QYT Sbjct: 11 ANKAPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNRSLRIAAEEKDADPKKQTYSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKG-NICCLFINDLDAGAGRMGGTTQYT 248
BLAST of EY665812 vs. ExPASy Swiss-Prot
Match: RCA_SOLPN (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 310.071 bits (793), Expect = 9.768e-84 Identity = 161/236 (68.22%), Postives = 188/236 (79.66%), Query Frame = 3 Query: 48 AAAVPLSFNGSGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITAEVNENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAPDIIREGKNVLPLDQ*S*MQKLVLWGGTPQYT 752 A+ PLS N S A TSVPS++FFG SLKKV ++ + KV + + ++ A+ E +TK+DRWKGL + SDDQQDI RGKG VDSLFQAP GTGTH+A+M+SY+Y+SQ L+TY LDN +DG YIAPAFMDKLVVHITKNF++LPNIKVPLILG+WGGKGQGKSFQCELVF KMGINPIMMSAGELESGNAGEPAKLIRQRYREA +IIR+G N+ L GGT QYT Sbjct: 11 ASKAPLSLNNSVAGTSVPSTAFFGKSLKKVYAKGVSSPKVSNRNLRVVAQ--EVDETKEDRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKG-NMCCLFINDLDAGAGRMGGTTQYT 243 The following BLAST results are available for this feature:
BLAST of EY665812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665812 ID=EY665812; Name=EY665812; organism=Citrus sinensis; type=EST; length=821bpback to top |