CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CORU7 (30S ribosomal protein S5 OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=rpsE PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.209e-17 Identity = 51/99 (51.52%), Postives = 64/99 (64.65%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK A +AR+N VPM T H G+ A VMLRPA+PGTGVIAGGA R VLE AGV++ L K LGS NA+N ATV ++++ + EV+ RG Sbjct: 95 QKGAEEARKNFFRVPMING-TITHPVQGEAAAGVVMLRPAAPGTGVIAGGAARPVLECAGVQDILCKSLGSPNAINVVHATVAGLKELVRPEEVAARRG 192
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CORA7 (30S ribosomal protein S5 OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=rpsE PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.209e-17 Identity = 51/99 (51.52%), Postives = 66/99 (66.67%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK A +AR+N VPM T H +G A VM++PA+PGTGVIAGGA R VLE AGV++ L K LGS+NALN RATV ++++ + EV+ RG Sbjct: 91 QKGAEEARKNFFRVPMIAG-TITHPVEGRDAAGIVMMKPAAPGTGVIAGGAARPVLECAGVQDILSKSLGSDNALNVVRATVDGLKQLVRPEEVAARRG 188
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_STAES (30S ribosomal protein S5 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=rpsE PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.579e-17 Identity = 46/99 (46.46%), Postives = 67/99 (67.68%), Query Frame = -1 Query: 201 KSAVDA-RRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 494 K AV+A ++++V VP + T PH G +G+ V ++PA+PGTGVIAGG VR VLE+AG+ + L K LGSN +N RAT+ +Q +K +V++ RG Sbjct: 61 KKAVEAAKKDLVVVPRVEGTT-PHTITGQYGSGSVFMKPAAPGTGVIAGGPVRAVLELAGITDILSKSLGSNTPINMVRATINGLQNLKNAEDVAKLRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_STAEQ (30S ribosomal protein S5 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=rpsE PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.579e-17 Identity = 46/99 (46.46%), Postives = 67/99 (67.68%), Query Frame = -1 Query: 201 KSAVDA-RRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 494 K AV+A ++++V VP + T PH G +G+ V ++PA+PGTGVIAGG VR VLE+AG+ + L K LGSN +N RAT+ +Q +K +V++ RG Sbjct: 61 KKAVEAAKKDLVVVPRVEGTT-PHTITGQYGSGSVFMKPAAPGTGVIAGGPVRAVLELAGITDILSKSLGSNTPINMVRATINGLQNLKNAEDVAKLRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PROAC (30S ribosomal protein S5 OS=Propionibacterium acnes GN=rpsE PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.579e-17 Identity = 49/98 (50.00%), Postives = 66/98 (67.35%), Query Frame = -1 Query: 201 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 494 K+ +A+++ VP+ T H G+ A VMLRPASPGTGVIAGG+ R VLE AGV + L K LGS+NA+N ATV A+Q++++ EV+R RG Sbjct: 85 KAVEEAKKHFFKVPLVGR-TITHPVIGEKAAGVVMLRPASPGTGVIAGGSARAVLECAGVHDVLAKSLGSSNAINVVHATVDALQQLEEPEEVARRRG 181
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PROA2 (30S ribosomal protein S5 OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=rpsE PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.579e-17 Identity = 45/97 (46.39%), Postives = 64/97 (65.98%), Query Frame = -1 Query: 204 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRER 494 K D ++N+V VP+ K T PH+ +G+AKV+++PA+PGTG+IAGGAVR VLEMAG+ + L K LGS+N N +A + ++ M EV R Sbjct: 67 KGVEDGKKNVVKVPIVKG-TIPHQVVAKYGSAKVLMKPATPGTGLIAGGAVRAVLEMAGIHDILTKSLGSSNPHNVVKAAIKGLESMSDAYEVGERR 162
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PELPB (30S ribosomal protein S5 OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=rpsE PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.579e-17 Identity = 45/97 (46.39%), Postives = 64/97 (65.98%), Query Frame = -1 Query: 204 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRER 494 K D ++N++ VP+ K T PH+ FG+AKVM++PA+PGTG+IAGGAVR VLEMAG+ + L K LGS+N N +A + +Q + +V R Sbjct: 67 KGIEDGKKNVIKVPIVKG-TIPHQIVAKFGSAKVMMKPATPGTGLIAGGAVRAVLEMAGIHDILTKSLGSSNPHNVVKAAIKGLQSISDAYDVGERR 162
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_MYCUA (30S ribosomal protein S5 OS=Mycobacterium ulcerans (strain Agy99) GN=rpsE PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.579e-17 Identity = 48/101 (47.52%), Postives = 65/101 (64.36%), Query Frame = -1 Query: 192 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 494 K +AR+ VP+ T H G+ A V+LRPASPGTGV+AGGA R VLE AGV + L K LGS+NA+N ATV A++ +++ EV+ RG+P+ Sbjct: 92 KGVEEARKGFFRVPLIGG-TITHPVQGEAAAGVVLLRPASPGTGVLAGGAARAVLECAGVHDILAKSLGSDNAINVVHATVAALKMLQRPEEVAARRGLPI 191
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_MYCMS (30S ribosomal protein S5 OS=Mycoplasma mycoides subsp. mycoides SC GN=rpsE PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.579e-17 Identity = 55/184 (29.89%), Postives = 89/184 (48.37%), Query Frame = -1 Query: 204 SVSGNDVYVMDSKAKKTSAFGK-----TKKEKVKDGFEEXXXXXXXXXXXXXXXXQLKFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRER 740 S ++V ++ K+T F + +K ++VKD FEE +F A+ ++K+ +A++N+V+V + + T PH G FGA K++++PA GTG+IAGG R V+E+AG+ + K LGSNNA+N RAT + M+ + V R Sbjct: 12 SEMNSNVEKASTQVKETKKFERRTRPQSKSKQVKDEFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGNKKGLVGMGTGKANEVPEAIKKAIKEAKKNLVSVTL-RNTTVPHEVLGTFGAGKILIKPAKVGTGIIAGGPARAVIELAGISDVYAKSLGSNNAINMIRATFEGLSSMQTLKRVQELR 194
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_LACLA (30S ribosomal protein S5 OS=Lactococcus lactis subsp. lactis GN=rpsE PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.579e-17 Identity = 47/99 (47.47%), Postives = 65/99 (65.66%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ A++N++TVPM T PH + G FG K++L+PA G GV AGGAVR VLE+AGV + K LGSN +N RATV + ++K+ EV+ RG Sbjct: 64 RKAIEAAKKNLITVPMVG-TTLPHEALGVFGGGKILLKPAVEGAGVAAGGAVRAVLELAGVADVTSKSLGSNTPINVVRATVDGLNQLKRAEEVAALRG 161 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |