CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RR5_ARATH (30S ribosomal protein S5, chloroplastic OS=Arabidopsis thaliana GN=rps5 PE=1 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 1.408e-66 Identity = 137/210 (65.24%), Postives = 156/210 (74.29%), Query Frame = -1 Query: 192 DELPMETEDEIAAAYEELYGPAYAGVSVSGNDVYVMDSKAKKTSAFG-KTKKEKVKDGFEEXXXXXXXXXXXXXXXXQLKFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 818 DE ETE+EIA A+EELYGPAY+G S+ G D+YVMDSK KK+S G K KK+K++DGFEE QLKFRAI VQKSA+DARRNIV VPMTKY TFPHRS+GD+GAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARAT+ AVQ+M+Q+R+V++ERGIPM Sbjct: 89 DEGSDETEEEIATAFEELYGPAYSGESMLGKDIYVMDSKHKKSSGIGGKPKKDKIRDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIVQVPMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATLAAVQQMRQFRDVAQERGIPM 298
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RR5_SPIOL (30S ribosomal protein S5, chloroplastic OS=Spinacia oleracea GN=rps5 PE=1 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 3.137e-66 Identity = 132/210 (62.86%), Postives = 155/210 (73.81%), Query Frame = -1 Query: 192 DELPMETEDEIAAAYEELYGPAYAGVSVSGNDVYVMDSKAKKTSAFG-KTKKEKVKDGFEEXXXXXXXXXXXXXXXXQLKFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 818 DE P E+E+EIA AYEELYG AY+G S+ GNDVY MDSK KK + FG K+KKEK++DGFEE ++FRAI VQK+AVDARRNI+TVPMTKYLTFPHR++ D+GAA+VMLRPA+PGTGVIAGGAVR VLEMAGVENALGKQLGSNNALNNARAT+VAVQ M+Q+ +V+R+RGIPM Sbjct: 94 DEPPFESEEEIALAYEELYGAAYSGESLLGNDVYAMDSKIKKATGFGSKSKKEKIRDGFEENVVQVRRVTKVVKGGKHMRFRAIVVVGDKKGQVGVGVGKAKEVVSAVQKAAVDARRNIITVPMTKYLTFPHRNEADYGAARVMLRPAAPGTGVIAGGAVRTVLEMAGVENALGKQLGSNNALNNARATIVAVQTMRQFSDVARDRGIPM 303
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RR5_PORYE (30S ribosomal protein S5, chloroplastic OS=Porphyra yezoensis GN=rps5 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.430e-26 Identity = 67/163 (41.10%), Postives = 96/163 (58.90%), Query Frame = -1 Query: 192 KTKKEKVKD-GFEEXXXXXXXXXXXXXXXXQLKFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 677 K K K KD G+EE +L FR I V+K DA++++VTVP+TK + PH +G GAAKV+LRP++PG+GVIAGG+VR VLE++GV+N L KQLGSNN LNNARA + + +++ + E +++RG+P+ Sbjct: 6 KQSKGKDKDSGWEERVVQVKRVTKVVKGGKKLSFRVILVIGNEQGQVGVGVGKASDVIGAVKKGVTDAKKHLVTVPLTKSNSIPHPINGISGAAKVILRPSAPGSGVIAGGSVRTVLELSGVQNILAKQLGSNNTLNNARAVLNGLTQLRTFSEAAKDRGVPI 168
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_NOSP7 (30S ribosomal protein S5 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rpsE PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.174e-26 Identity = 57/102 (55.88%), Postives = 76/102 (74.51%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K D +++++ +P+TK + PH DG G AKV++RPA+PGTGVIAGGAVR VLE+AGV N L KQLGSNN LNNARA V A+ ++ EV+ +RGIP+ Sbjct: 69 KKGVADGKKHLIDIPITKSNSIPHPIDGVGGGAKVIMRPAAPGTGVIAGGAVRTVLELAGVRNVLAKQLGSNNPLNNARAAVNALSTLRTLSEVAEDRGIPI 170
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RR5_PORPU (30S ribosomal protein S5, chloroplastic OS=Porphyra purpurea GN=rps5 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.413e-26 Identity = 66/163 (40.49%), Postives = 96/163 (58.90%), Query Frame = -1 Query: 192 KTKKEKVKD-GFEEXXXXXXXXXXXXXXXXQLKFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 677 K K K KD G+EE +L FR I V+K DA++++VTVP+TK + PH +G GAA+V+LRP++PG+GVIAGG+VR VLE++GV+N L KQLGSNN LNNARA + + +++ + E +++RG+P+ Sbjct: 6 KQGKSKEKDNGWEERVVQVKRVTKVVKGGKKLSFRVILVVGNEQGQVGVGVGKASDVIGAVKKGVTDAKKHLVTVPLTKSNSIPHPINGISGAAQVILRPSAPGSGVIAGGSVRTVLELSGVQNILAKQLGSNNTLNNARAVLNGLTQLRTFSEAAKDRGVPI 168
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_SYNP2 (30S ribosomal protein S5 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rpsE PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.070e-26 Identity = 58/100 (58.00%), Postives = 78/100 (78.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K DA++++V VP+TK T HR +G G AKVM+RPA+PGTGVIAGGAVR VLE+AGV+N L KQLGS++ LNNARATV A+ ++ + V++ERG+ Sbjct: 67 RKGVSDAKKHVVDVPLTKTNTITHRINGVAGGAKVMMRPAAPGTGVIAGGAVRTVLELAGVKNILAKQLGSSSPLNNARATVDALGNLRSFSSVAQERGV 166
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_ANAVT (30S ribosomal protein S5 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rpsE PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.234e-26 Identity = 57/100 (57.00%), Postives = 74/100 (74.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K D +++++ +P+TK + PH DG G AKVM+RPA+PGTGVIAGGAVR VLE+AGV N L KQLGSNN LNNARA V A+ ++ EV+ +RGI Sbjct: 68 KKGVADGKKHLIDIPITKSNSIPHPIDGVGGGAKVMMRPAAPGTGVIAGGAVRTVLELAGVRNVLAKQLGSNNPLNNARAAVNALSTLRTLAEVAEDRGI 167
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_ANASP (30S ribosomal protein S5 OS=Anabaena sp. (strain PCC 7120) GN=rpsE PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.234e-26 Identity = 57/100 (57.00%), Postives = 74/100 (74.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K D +++++ +P+TK + PH DG G AKVM+RPA+PGTGVIAGGAVR VLE+AGV N L KQLGSNN LNNARA V A+ ++ EV+ +RGI Sbjct: 68 KKGVADGKKHLIDIPITKSNSIPHPIDGVGGGAKVMMRPAAPGTGVIAGGAVRTVLELAGVRNVLAKQLGSNNPLNNARAAVNALSTLRTLAEVAEDRGI 167
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_THEEB (30S ribosomal protein S5 OS=Thermosynechococcus elongatus (strain BP-1) GN=rpsE PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.575e-25 Identity = 55/102 (53.92%), Postives = 79/102 (77.45%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K D +++++ VP+TK + PH + G+ GAA+VM+RPA+PGTGVIAGG+VR VLE+AGV N L KQLGS+N LNNARA + A+ ++ ++EV+ ER IP+ Sbjct: 67 RKGVADGKKHLIDVPITKSNSIPHPTFGEGGAARVMIRPAAPGTGVIAGGSVRTVLELAGVRNVLAKQLGSSNPLNNARAALEALAALRTFQEVAEEREIPI 168
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CYAP7 (30S ribosomal protein S5 OS=Cyanothece sp. (strain PCC 7424) GN=rpsE PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.575e-25 Identity = 53/102 (51.96%), Postives = 78/102 (76.47%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K D ++ ++ VP+TK + PH ++G G A V++RPA+PGTGVIAGGAVR VLE+AGV+N L KQLGS+N LNNARA + A++ ++ + EV++ER +P+ Sbjct: 67 RKGVADGKKQLIEVPLTKASSIPHLTNGASGGASVIMRPAAPGTGVIAGGAVRTVLELAGVKNILAKQLGSDNPLNNARAAINALETLRTFSEVAKERDVPL 168 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |