CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_THEP1 (30S ribosomal protein S5 OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=rpsE PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.593e-17 Identity = 48/100 (48.00%), Postives = 68/100 (68.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+ A+RNI+ VP+ T PH G A+KV+LRPA+PGTG+IAGG VR V+E+AG++N L K LGS N LN A AT+ ++ + R+V++ R I Sbjct: 65 RKAISAAKRNIIEVPVING-TIPHEIIGRQDASKVLLRPAAPGTGIIAGGTVRAVVELAGIQNILTKSLGSTNPLNLALATMNGLKNLLDPRKVAKLRDI 163
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PROVI (30S ribosomal protein S5 OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=rpsE PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.593e-17 Identity = 44/97 (45.36%), Postives = 65/97 (67.01%), Query Frame = -1 Query: 204 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRER 494 K D ++N+V VP+ K T PH+ +G+AKV+++PA+PGTG+IAGGAVR VLEMAGV + L K LGS+N N +A + ++ + +V+ R Sbjct: 67 KGVEDGKKNVVKVPIIKG-TIPHQIIAKYGSAKVLMKPATPGTGLIAGGAVRAVLEMAGVRDVLTKSLGSSNPHNVVKAAIKGLKSISDANDVAERR 162
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_OCEIH (30S ribosomal protein S5 OS=Oceanobacillus iheyensis GN=rpsE PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.593e-17 Identity = 43/99 (43.43%), Postives = 67/99 (67.68%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ DA++N+++VP+ T PH G FG+ V+++PA+ GTGVI+GG VR +LE+AGV + L K LGSN +N RAT+ + +K +V++ RG Sbjct: 62 KKAVDDAKKNLISVPIVG-TTIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGDILTKSLGSNTPINMIRATLNGLTNLKTAEDVAKLRG 159
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_LACBA (30S ribosomal protein S5 OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=rpsE PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.593e-17 Identity = 45/102 (44.12%), Postives = 67/102 (65.69%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K+ AR+N++ VP+ T PH G FG K+ML+PA+ G+GV AGGAVR V+E+AGV + K+LGSN +N RAT + ++K+ EV+ RG+ + Sbjct: 62 RKAVEAARKNLIEVPIVG-TTIPHEVLGTFGGGKIMLKPAAEGSGVTAGGAVRSVMELAGVADVTSKRLGSNTPVNAVRATFDGLTQLKRAEEVAALRGVSL 162
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_GEOLS (30S ribosomal protein S5 OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=rpsE PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.593e-17 Identity = 41/100 (41.00%), Postives = 64/100 (64.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K A++N++ VP+ + + P+ G FGA +++++PASPGTGVIAGGA R + E AG+ N L K LGSNN N +A ++ +K E++ RG+ Sbjct: 61 RKGVEQAKKNLIKVPVNQNQSIPYEIIGRFGAGRILMKPASPGTGVIAGGAARAIFEAAGISNILSKCLGSNNPHNVVKAAFEGLRLLKTPEELTARRGL 160
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_BACV8 (30S ribosomal protein S5 OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=rpsE PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.593e-17 Identity = 45/101 (44.55%), Postives = 65/101 (64.36%), Query Frame = -1 Query: 192 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 494 K A++N+ VP+ K T PH FG A+V ++PAS GTGV+AGGA+R VLE GV + L K GS+N N +AT++A+ +M+ R V++ RG+ M Sbjct: 66 KGVEAAKKNLTRVPVLKG-TVPHEQSAKFGGAEVFIKPASTGTGVVAGGAMRAVLESVGVTDVLAKSKGSSNPHNLVKATILALGEMRDARMVAQNRGVSM 165
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_STRMU (30S ribosomal protein S5 OS=Streptococcus mutans GN=rpsE PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.999e-17 Identity = 45/100 (45.00%), Postives = 66/100 (66.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+ A++N++ VPM T PH +FG A+V+L+PA G GV AGGAVR V+E+AGV + K LGSN +N RATV ++++K+ EV+ RG+ Sbjct: 60 RKAVEAAKKNMIEVPMVG-TTIPHEVRSEFGGARVLLKPAVEGAGVAAGGAVRAVVELAGVADITSKSLGSNTPINIVRATVEGLKQLKRAEEVASLRGV 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_STRCO (30S ribosomal protein S5 OS=Streptomyces coelicolor GN=rpsE PE=3 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 5.999e-17 Identity = 45/101 (44.55%), Postives = 66/101 (65.35%), Query Frame = -1 Query: 192 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 494 K +A+++ VP + T PH G+ A V+L+PASPGTGVIAGG VR VLE AG+ + L K LGS+N +N ATV A++ +++ E++ RG+P+ Sbjct: 85 KGVEEAKKHFFKVPRIQG-TIPHPIQGEKAAGVVLLKPASPGTGVIAGGPVRAVLECAGIHDVLSKSLGSDNQINIVHATVEALKGLQRPEEIAARRGLPL 184
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_LACPL (30S ribosomal protein S5 OS=Lactobacillus plantarum GN=rpsE PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.999e-17 Identity = 43/100 (43.00%), Postives = 68/100 (68.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K++ A++N++TVPM T PH + G +G ++ML+PA G+GV AGGAVR V+E+AGV++ K+LGSN +N RAT ++ +K +V+ RG+ Sbjct: 61 RKASEAAKKNLITVPMVG-TTIPHEALGVYGGGRIMLKPAVEGSGVAAGGAVRAVMELAGVDDVTSKRLGSNTPVNVVRATFEGLKSLKTAEQVAALRGV 159
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CHLTE (30S ribosomal protein S5 OS=Chlorobium tepidum GN=rpsE PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.999e-17 Identity = 43/97 (44.33%), Postives = 64/97 (65.98%), Query Frame = -1 Query: 204 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRER 494 K D ++N++ VP+ K T PH +G+AKV+++PA+PGTG+IAGGAVR VLEMAG+ + L K LGS+N N +A + +Q + +V+ R Sbjct: 67 KGVEDGKKNVIKVPIVKG-TIPHPIVAKYGSAKVLMKPATPGTGLIAGGAVRAVLEMAGIHDILTKSLGSSNPHNVVKAAIKGLQNISDANDVAERR 162 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |