CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CHLP8 (30S ribosomal protein S5 OS=Chlorobaculum parvum (strain NCIB 8327) GN=rpsE PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.999e-17 Identity = 43/97 (44.33%), Postives = 64/97 (65.98%), Query Frame = -1 Query: 204 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRER 494 K D ++N++ VP+ K T PH +G+AKV+++PA+PGTG+IAGGAVR VLEMAG+ + L K LGS+N N +A + +Q + +V+ R Sbjct: 67 KGVEDGKKNVIKVPIVKG-TIPHPIVAKYGSAKVLMKPATPGTGLIAGGAVRAVLEMAGIHDILTKSLGSSNPHNVVKAAIKGLQSISDANDVAERR 162
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_BACTN (30S ribosomal protein S5 OS=Bacteroides thetaiotaomicron GN=rpsE PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.999e-17 Identity = 44/99 (44.44%), Postives = 64/99 (64.65%), Query Frame = -1 Query: 198 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 494 K A++N+V VP+ K T PH FG A+V ++PAS GTGV+AGGA+R VLE G+ + L K GS+N N +AT+ A+ +M+ R +++ RGI Sbjct: 67 KGVESAKKNLVKVPVLKG-TVPHEQSAKFGGAEVFIKPASHGTGVVAGGAMRAVLESVGITDVLAKSKGSSNPHNLVKATIEALSEMRDARMIAQNRGI 164
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_THEMA (30S ribosomal protein S5 OS=Thermotoga maritima GN=rpsE PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.835e-17 Identity = 48/100 (48.00%), Postives = 68/100 (68.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+ A+RNIV VP+ T PH G A+KV+L+PA+PGTG+IAGG VR V+E+AG++N L K LGS N LN A AT+ ++ + R+V++ R I Sbjct: 65 RKAISAAKRNIVEVPVING-TIPHEVIGRQDASKVLLKPAAPGTGIIAGGTVRAVVELAGIQNILTKSLGSTNPLNLALATMNGLKNLLDPRKVAKLRDI 163
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_NOCSJ (30S ribosomal protein S5 OS=Nocardioides sp. (strain BAA-499 / JS614) GN=rpsE PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.835e-17 Identity = 46/101 (45.54%), Postives = 65/101 (64.36%), Query Frame = -1 Query: 192 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 494 K +A+++ VP + T PH G+ A V+LRPA+PGTGVIAGG VR VLE AG+ + L K LGS+N +N ATV A++ ++Q V+ RG+P+ Sbjct: 81 KGVEEAKKHFFRVPRIQG-TIPHPVQGEKAAGVVLLRPAAPGTGVIAGGPVRAVLECAGIHDVLSKSLGSSNQINIVHATVEALRMLEQPEAVAARRGLPV 180
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_MYXXD (30S ribosomal protein S5 OS=Myxococcus xanthus (strain DK 1622) GN=rpsE PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.835e-17 Identity = 47/99 (47.47%), Postives = 64/99 (64.65%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K +A++N+ VP+ + T PH G FGA V+L+PA+ GTGVIAGGAVR VLE AG+ N L K GS N N +ATV ++ ++ +VSR RG Sbjct: 62 RKGGENAKKNLFRVPLVGH-TIPHEVLGHFGAGWVLLKPATQGTGVIAGGAVRAVLEAAGIRNILTKSQGSRNPHNVLKATVAGLKLLRSAEQVSRLRG 159
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_FRASN (30S ribosomal protein S5 OS=Frankia sp. (strain EAN1pec) GN=rpsE PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.835e-17 Identity = 46/101 (45.54%), Postives = 64/101 (63.37%), Query Frame = -1 Query: 192 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 494 K +A+++ VP T PH G+ A V+L+PASPGTGVIAGG VR VLE AGV + L K LGS+N +N ATV A++ + + E++ RG+P+ Sbjct: 85 KGVEEAKKHFFKVPRIGS-TIPHPVQGEEAAGVVLLKPASPGTGVIAGGPVRAVLECAGVHDVLSKSLGSSNPINIVHATVAALRGLMRPEEIAARRGLPL 184
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_FRASC (30S ribosomal protein S5 OS=Frankia sp. (strain CcI3) GN=rpsE PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.835e-17 Identity = 46/101 (45.54%), Postives = 64/101 (63.37%), Query Frame = -1 Query: 192 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 494 K +A+++ VP T PH G+ A V+L+PASPGTGVIAGG VR VLE AGV + L K LGS+N +N ATV A++ + + E++ RG+P+ Sbjct: 85 KGVEEAKKHFFKVPRIGS-TIPHPVQGEEAAGVVLLKPASPGTGVIAGGPVRAVLECAGVHDVLSKSLGSSNPINIVHATVAALRGLMRPEEIAARRGLPL 184
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_FRAAA (30S ribosomal protein S5 OS=Frankia alni (strain ACN14a) GN=rpsE PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.835e-17 Identity = 46/101 (45.54%), Postives = 64/101 (63.37%), Query Frame = -1 Query: 192 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 494 K +A+++ VP T PH G+ A V+L+PASPGTGVIAGG VR VLE AGV + L K LGS+N +N ATV A++ + + E++ RG+P+ Sbjct: 85 KGVEEAKKHFFKVPRIGS-TIPHPVQGEEAAGVVLLKPASPGTGVIAGGPVRAVLECAGVHDVLSKSLGSSNPINIVHATVAALRGLMRPEEIAARRGLPL 184
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_BIFAA (30S ribosomal protein S5 OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=rpsE PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.835e-17 Identity = 47/101 (46.53%), Postives = 68/101 (67.33%), Query Frame = -1 Query: 192 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 494 K +DA++++ TVP K T H G A V+LRPA+PGTGVIAGGAVR V+E AG+ + L K +GS A+N RATV A++K+++ E++ RG+ + Sbjct: 106 KGQLDAKKHMFTVPRIKG-TVTHPVIGHDAAGTVLLRPAAPGTGVIAGGAVRAVMECAGITDVLTKSMGSATAVNVVRATVDALKKLEEPEEIAARRGMSL 205
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_TROWT (30S ribosomal protein S5 OS=Tropheryma whipplei (strain Twist) GN=rpsE PE=3 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 1.023e-16 Identity = 47/99 (47.47%), Postives = 63/99 (63.64%), Query Frame = -1 Query: 198 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 494 K AR+N TVP T PH G+ + V+LRPA+PGTGVIAGG VR VLE AGV + L K LGS+N++N AT+ A++ ++ V+R RG+ Sbjct: 104 KGIESARKNFFTVPRVAS-TIPHPVQGEAASGVVLLRPAAPGTGVIAGGPVRAVLECAGVRDVLSKSLGSSNSINVVYATLDALKHLEDPASVARRRGL 201 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |