CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_TROW8 (30S ribosomal protein S5 OS=Tropheryma whipplei (strain TW08/27) GN=rpsE PE=3 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 1.023e-16 Identity = 47/99 (47.47%), Postives = 63/99 (63.64%), Query Frame = -1 Query: 198 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 494 K AR+N TVP T PH G+ + V+LRPA+PGTGVIAGG VR VLE AGV + L K LGS+N++N AT+ A++ ++ V+R RG+ Sbjct: 104 KGIESARKNFFTVPRVAS-TIPHPVQGEAASGVVLLRPAAPGTGVIAGGPVRAVLECAGVRDVLSKSLGSSNSINVVYATLDALKHLEDPASVARRRGL 201
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PHEZH (30S ribosomal protein S5 OS=Phenylobacterium zucineum (strain HLK1) GN=rpsE PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.023e-16 Identity = 43/99 (43.43%), Postives = 66/99 (66.67%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ +A+++++ VP+ + T H G +GA KVM+R A PGTGVIAGG +R VLE GV++ +GK +GS+N N RAT A++ R+V+ +RG Sbjct: 72 RKATEEAKKSMIRVPLRESRTLHHDGAGRWGAGKVMVRAAPPGTGVIAGGPMRAVLETLGVQDVVGKSVGSSNPYNMVRATFEALKAQSSPRQVAAKRG 170
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_LEIXX (30S ribosomal protein S5 OS=Leifsonia xyli subsp. xyli GN=rpsE PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.023e-16 Identity = 46/99 (46.46%), Postives = 63/99 (63.64%), Query Frame = -1 Query: 198 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 494 K +A++N VP T PH G+ A V+LRPA+ GTGVIAGG VR VLE AG+ + L K LGS+N +N ATV A+Q++++ R V+ RG+ Sbjct: 101 KGVEEAKKNFFRVPRVAN-TIPHPVQGEAAAGVVLLRPAAAGTGVIAGGPVRAVLECAGIHDVLSKSLGSSNTINIVHATVEALQQLEEPRAVAARRGL 198
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_BACFR (30S ribosomal protein S5 OS=Bacteroides fragilis GN=rpsE PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.023e-16 Identity = 44/99 (44.44%), Postives = 64/99 (64.65%), Query Frame = -1 Query: 198 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 494 K A++N+ VP+ K T PH FG A+V ++PAS GTGV+AGGA+R VLE GV + L K GS+N N +AT++A+ +M+ R +++ RGI Sbjct: 67 KGVESAKKNLTRVPVLKG-TVPHEQSAKFGGAEVFIKPASHGTGVVAGGAMRAVLESVGVTDVLAKSKGSSNPHNLVKATIMALGEMRDARMIAQNRGI 164
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_BACFN (30S ribosomal protein S5 OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=rpsE PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.023e-16 Identity = 44/99 (44.44%), Postives = 64/99 (64.65%), Query Frame = -1 Query: 198 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 494 K A++N+ VP+ K T PH FG A+V ++PAS GTGV+AGGA+R VLE GV + L K GS+N N +AT++A+ +M+ R +++ RGI Sbjct: 67 KGVESAKKNLTRVPVLKG-TVPHEQSAKFGGAEVFIKPASHGTGVVAGGAMRAVLESVGVTDVLAKSKGSSNPHNLVKATIMALGEMRDARMIAQNRGI 164
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_THIDA (30S ribosomal protein S5 OS=Thiobacillus denitrificans (strain ATCC 25259) GN=rpsE PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.336e-16 Identity = 46/99 (46.46%), Postives = 65/99 (65.66%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ +ARR +V + + K TF H G GA++V+++PAS GTG+IAGGA+R V E+ GV+N L K LGS N N RAT+ + KM E++ +RG Sbjct: 66 QKAMEEARRKLVKISL-KNGTFHHTVVGQHGASRVLIQPASEGTGIIAGGAMRAVFEVMGVQNVLAKCLGSTNPYNVVRATIDGLMKMSTPSEIAAKRG 163
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PELCD (30S ribosomal protein S5 OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=rpsE PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.336e-16 Identity = 47/99 (47.47%), Postives = 66/99 (66.67%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K A++N++ VP+ K + P G FGA +V+L+PAS GTGVIAGGAVR VLE++GV + L K +GSNN N RAT+ A+ ++K E+ RG Sbjct: 61 RKGVEQAKKNLIRVPL-KDRSIPFDVIGKFGAGRVLLKPASAGTGVIAGGAVRAVLEVSGVGDILSKCIGSNNPHNVVRATIDALSRLKSAEELRALRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_FERNB (30S ribosomal protein S5 OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=rpsE PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.336e-16 Identity = 45/100 (45.00%), Postives = 67/100 (67.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+ V ARRNI+ +P+ K T PH G AAK++++PA+PGTG+IA G VR +LE+AGV+N L K +GS N + A+ATV V+ + +++ R I Sbjct: 65 RKALVSARRNIIEIPVVKG-TIPHEVVGRQDAAKILMKPAAPGTGIIANGTVRAILELAGVQNVLTKAMGSTNPVIMAQATVNGVKNLYSIDKIAALRDI 163
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_ENTFA (30S ribosomal protein S5 OS=Enterococcus faecalis GN=rpsE PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.336e-16 Identity = 45/99 (45.45%), Postives = 65/99 (65.66%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ DA++N+V VPM T PH G FG +++++PA G+GV AGG VR VLE+AGV + K LGSN +N RATV ++++K+ EV+ RG Sbjct: 61 RKAIEDAKKNLVEVPMVGS-TIPHEVIGVFGGGRILMKPAVEGSGVAAGGPVRAVLELAGVADITSKSLGSNTPINVVRATVEGLKQLKRAEEVAALRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CHLCH (30S ribosomal protein S5 OS=Chlorobium chlorochromatii (strain CaD3) GN=rpsE PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.336e-16 Identity = 44/97 (45.36%), Postives = 64/97 (65.98%), Query Frame = -1 Query: 204 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRER 494 K D ++N++ VP+ K T PH+ +G+AKVM++PA+PGTG+IAGGAVR VLEMAG+ + L K LGS+N N +A + +Q + +V R Sbjct: 67 KGIEDGKKNVIKVPIVKG-TIPHQIVVKYGSAKVMMKPATPGTGLIAGGAVRAVLEMAGIHDILTKSLGSSNPHNVVKAAIKGLQYISDAYDVGERR 162 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |