CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_ACIF5 (30S ribosomal protein S5 OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=rpsE PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.336e-16 Identity = 45/99 (45.45%), Postives = 64/99 (64.65%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ ARR + ++P+ + T P+ +G GAA+VMLRPA G+GVIAGGA+R V E G+ N + K LGSNN +N RAT A K+ + ++ +RG Sbjct: 64 QKATDQARRWMTSIPLMRGGTIPYPVEGRHGAARVMLRPAPEGSGVIAGGAMRAVCEAVGLRNVVAKSLGSNNPINVVRATFDAFDKLISPQAIAMKRG 162
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_ACIF2 (30S ribosomal protein S5 OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=rpsE PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.336e-16 Identity = 45/99 (45.45%), Postives = 64/99 (64.65%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ ARR + ++P+ + T P+ +G GAA+VMLRPA G+GVIAGGA+R V E G+ N + K LGSNN +N RAT A K+ + ++ +RG Sbjct: 64 QKATDQARRWMTSIPLMRGGTIPYPVEGRHGAARVMLRPAPEGSGVIAGGAMRAVCEAVGLRNVVAKSLGSNNPINVVRATFDAFDKLISPQAIAMKRG 162
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_TREPS (30S ribosomal protein S5 OS=Treponema pallidum subsp. pallidum (strain SS14) GN=rpsE PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.745e-16 Identity = 46/99 (46.46%), Postives = 65/99 (65.66%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +KS A+R++V P+ K T PH F + V+LRPA GTG+IAGG VR ++E+AG + L K LGSN+A+N RAT AV ++ R+++RERG Sbjct: 67 RKSVERAKRSMVLFPL-KDGTIPHEVQAKFKGSLVLLRPACSGTGIIAGGTVRAIMEVAGATDVLSKSLGSNSAINVVRATFGAVAQLMDARKLARERG 164
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_TREPA (30S ribosomal protein S5 OS=Treponema pallidum GN=rpsE PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.745e-16 Identity = 46/99 (46.46%), Postives = 65/99 (65.66%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +KS A+R++V P+ K T PH F + V+LRPA GTG+IAGG VR ++E+AG + L K LGSN+A+N RAT AV ++ R+++RERG Sbjct: 67 RKSVERAKRSMVLFPL-KDGTIPHEVQAKFKGSLVLLRPACSGTGIIAGGTVRAIMEVAGATDVLSKSLGSNSAINVVRATFGAVAQLMDARKLARERG 164
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_STAS1 (30S ribosomal protein S5 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=rpsE PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.745e-16 Identity = 45/99 (45.45%), Postives = 66/99 (66.67%), Query Frame = -1 Query: 201 KSAVDA-RRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 494 K AV+A ++++V VP + T PH G F + V ++PA+PGTGVIAGG VR VLE+AG+ + L K LGSN +N RAT+ ++ +K +V++ RG Sbjct: 60 KKAVEAAKKDLVVVPRVEGTT-PHTITGRFSSGSVFMKPAAPGTGVIAGGPVRAVLELAGITDILSKSLGSNTPINMVRATINGLKNLKNAEDVAKLRG 157
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_SACEN (30S ribosomal protein S5 OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=rpsE PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.745e-16 Identity = 47/101 (46.53%), Postives = 64/101 (63.37%), Query Frame = -1 Query: 192 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 494 K +A++N VP T H G+ A V+LRPAS GTGVIAGG VR VLE AGV + L K LGS+N +N ATV A++++++ EV+ RG+P+ Sbjct: 87 KGVEEAKKNFFRVPRLGG-TITHPVQGEDAAGVVLLRPASAGTGVIAGGPVRAVLECAGVHDVLSKSLGSDNPINIVHATVAALKQLQRPEEVAARRGLPL 186
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_ROSS1 (30S ribosomal protein S5 OS=Roseiflexus sp. (strain RS-1) GN=rpsE PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.745e-16 Identity = 45/100 (45.00%), Postives = 65/100 (65.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K A++N++ VP++ T PH +F A+KV L PA+PGTGVIAG VR VLEMAG+++ L K+ GSNN +N +AT A+ + E +R RG+ Sbjct: 63 RKGVEAAKKNLIRVPLSG-TTIPHEVQMEFAASKVRLLPAAPGTGVIAGRGVRPVLEMAGIKDVLSKRYGSNNPINVVKATFKALSALTSLEEQARMRGM 161
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_LACSS (30S ribosomal protein S5 OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=rpsE PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.745e-16 Identity = 42/100 (42.00%), Postives = 65/100 (65.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+ DA++N++ VP T PH G FGA +V+L+PA G+G+ AGGAVR V+E+AG+++ K LGS A+N RAT+ + +MK +++ R I Sbjct: 61 RKAVEDAKKNLINVPKVG-TTLPHEVIGRFGAGRVLLKPAVEGSGIAAGGAVRAVMELAGIDDVTSKTLGSKTAINVIRATIDGLTRMKTAEQIAELRNI 159
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_BLOFL (30S ribosomal protein S5 OS=Blochmannia floridanus GN=rpsE PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.745e-16 Identity = 42/99 (42.42%), Postives = 62/99 (62.63%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ AR N++ +P+ T H G + A++ ++PAS GTG+IAGGA+R +LE+ G+ N L K GS N +N RATV A++ MK V+ +RG Sbjct: 64 QKAMEKARHNMIDIPLNPGRTLQHSIIGIYTGARIYMKPASEGTGIIAGGAMRAILEVVGIHNVLAKAYGSTNPINIVRATVNALKNMKSPEMVAEKRG 162
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_LEPCP (30S ribosomal protein S5 OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=rpsE PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.280e-16 Identity = 44/100 (44.00%), Postives = 64/100 (64.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 QK+ ARR +V +P+ T PH + G+ GAAKV+L PA GTG+IAGG +R V E+ G+ + + K LGS+N N RAT A+ +M +V+ +RG+ Sbjct: 67 QKAMESARRGLVKIPLRNG-TVPHNATGEHGAAKVLLAPAPAGTGIIAGGPMRAVFEVLGITDIVAKSLGSSNPYNMVRATFDALSRMTTASQVAAKRGL 165 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |