CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_LACRD (30S ribosomal protein S5 OS=Lactobacillus reuteri (strain DSM 20016) GN=rpsE PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.280e-16 Identity = 43/100 (43.00%), Postives = 66/100 (66.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+ A +N++TVP+ T PH G +G K+ML+PA G+GV AGGAVR V+++AGV + K+LGSN +N RAT ++++K EV++ RG+ Sbjct: 64 RKAQAAAEKNLITVPIVG-TTIPHEVIGVYGGGKIMLKPAVEGSGVAAGGAVRNVMDLAGVADVTSKRLGSNTPVNVVRATFEGLKQLKNAEEVAKLRGV 162
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_GEOSL (30S ribosomal protein S5 OS=Geobacter sulfurreducens GN=rpsE PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.280e-16 Identity = 42/100 (42.00%), Postives = 62/100 (62.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K A++N++ VP+ + T P+ G FGA +V+++PAS GTGVIAGGA R V E AG+ N L K LGSNN N +A + +++ E+ RG+ Sbjct: 61 RKGVEQAKKNLIKVPIVEGHTIPYEVLGHFGAGRVLIKPASAGTGVIAGGAARAVFEAAGLHNVLSKCLGSNNPHNVVKAAFNGLAQLRSPEEIMARRGV 160
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CHLSY (30S ribosomal protein S5 OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=rpsE PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.280e-16 Identity = 46/98 (46.94%), Postives = 63/98 (64.29%), Query Frame = -1 Query: 204 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRER 497 +K A A+RN++ VP+ + T PH F A KVMLRPA+PGTGVIAG VR V+E AG+++ L K GSNN +N +AT A+ +M E++ R Sbjct: 63 RKGAEAAKRNLIRVPLV-HATVPHEVVTKFAATKVMLRPAAPGTGVIAGRGVRPVVEAAGIKDLLSKVYGSNNPVNVVKATFKALSEMTSLHEMASRR 159
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CHLAA (30S ribosomal protein S5 OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=rpsE PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.280e-16 Identity = 46/98 (46.94%), Postives = 63/98 (64.29%), Query Frame = -1 Query: 204 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRER 497 +K A A+RN++ VP+ + T PH F A KVMLRPA+PGTGVIAG VR V+E AG+++ L K GSNN +N +AT A+ +M E++ R Sbjct: 63 RKGAEAAKRNLIRVPLV-HATVPHEVVTKFAATKVMLRPAAPGTGVIAGRGVRPVVEAAGIKDLLSKVYGSNNPVNVVKATFKALSEMTSLHEMASRR 159
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_ALKOO (30S ribosomal protein S5 OS=Alkaliphilus oremlandii (strain OhILAs) GN=rpsE PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.280e-16 Identity = 43/99 (43.43%), Postives = 64/99 (64.65%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K DA++N++ VP+ T PH + G FGA V++ PA GTG+IAGG VR VLE+AG ++ K LG+NNA N A + + ++K+ EV++ RG Sbjct: 63 RKGIEDAKKNLIHVPIVG-TTVPHETIGIFGAGNVLIMPAKEGTGIIAGGPVRTVLELAGFKDVRAKSLGTNNAKNMVNAAINGLSQLKRAEEVAKLRG 160
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_SHEAM (30S ribosomal protein S5 OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=rpsE PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.977e-16 Identity = 48/100 (48.00%), Postives = 65/100 (65.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 QK+ ARRN+VTV + + T H G ++V ++PAS GTG+IAGGA+R VLE+AGV N L K GS N +N RATV A+ MK +V+ +RG+ Sbjct: 63 QKAMEKARRNMVTVELNEG-TLHHPVKGRHTGSRVYMQPASQGTGIIAGGAMRAVLEVAGVHNVLSKAYGSTNPINIVRATVDALTHMKSPAQVAAKRGL 161
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_MESFL (30S ribosomal protein S5 OS=Mesoplasma florum GN=rpsE PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.977e-16 Identity = 48/152 (31.58%), Postives = 75/152 (49.34%), Query Frame = -1 Query: 213 KEKVKDGFEEXXXXXXXXXXXXXXXXQLKFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVS 668 K+ KD FEE +F A+ ++K+ +A++N++ VP+ + T PH G FGA +V+++PA PGTGVIAGG R V+E+AG+ + K LG NN +N RAT+ + M ++V+ Sbjct: 36 KQFQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVKEAKKNLIRVPL-RGTTVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIELAGIADVYAKSLGRNNPINMIRATIDGLSSMHTAKKVN 186
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_IDILO (30S ribosomal protein S5 OS=Idiomarina loihiensis GN=rpsE PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.977e-16 Identity = 47/100 (47.00%), Postives = 65/100 (65.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 QK+ ARRN+VTV + K T H G ++V ++PAS GTG+IAGGA+R VLE++GV N L K GS N +N RAT+ A+ MK +V+ +RG+ Sbjct: 61 QKAMEKARRNMVTVQL-KGDTLQHPVKGRHSGSQVYMQPASEGTGIIAGGAMRAVLEVSGVHNVLSKAYGSTNPINVVRATIKALNGMKSPEQVAAKRGL 159
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_GEOMG (30S ribosomal protein S5 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=rpsE PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.977e-16 Identity = 42/100 (42.00%), Postives = 63/100 (63.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K A++N++ VP+ + T P+ G FGA +V+++PAS GTGVIAGGA R V E AG+ N L K LGSNN N +A +++++ E+ RG+ Sbjct: 61 RKGVEQAKKNLIKVPIVEGQTIPYEVLGHFGAGRVLIKPASAGTGVIAGGAARAVFESAGLHNVLSKCLGSNNPHNVVKAAFDGLKQLRSPDEIMARRGM 160
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CYTH3 (30S ribosomal protein S5 OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=rpsE PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.977e-16 Identity = 43/101 (42.57%), Postives = 66/101 (65.35%), Query Frame = -1 Query: 192 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 494 K+ DA++N++ VP+ T PH G + V ++PA+PGTGVIAGGA+R V E AG+++ L K GS+N N +AT+ A+ KM+ +V+ +RG+ M Sbjct: 67 KAIDDAKKNLIKVPVING-TLPHEMIGKYSGGFVFVKPAAPGTGVIAGGAMRAVFESAGIKDVLAKSKGSSNPHNVVKATIDALVKMRAPHKVAMQRGVAM 166 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |