CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_SHEFN (30S ribosomal protein S5 OS=Shewanella frigidimarina (strain NCIMB 400) GN=rpsE PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.888e-16 Identity = 48/100 (48.00%), Postives = 64/100 (64.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 QK+ ARRN+VTV + T H G +KV ++PAS GTG+IAGGA+R VLE+AGV N L K GS N +N RATV A+ MK +++ +RG+ Sbjct: 62 QKAMEKARRNMVTVELNAG-TLHHPVKGRHTGSKVYMQPASQGTGIIAGGAMRAVLEVAGVHNVLSKAYGSTNPINIVRATVDALVHMKSPAQIAAKRGL 160
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_SHEDO (30S ribosomal protein S5 OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=rpsE PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.888e-16 Identity = 48/100 (48.00%), Postives = 64/100 (64.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 QK+ ARRN+VTV + T H G +KV ++PAS GTG+IAGGA+R VLE+AGV N L K GS N +N RATV A+ MK +++ +RG+ Sbjct: 62 QKAMEKARRNMVTVELNAG-TLHHPVKGRHTGSKVYMQPASQGTGIIAGGAMRAVLEVAGVHNVLSKAYGSTNPINIVRATVDALVHMKSPAQIAAKRGL 160
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_MYCCT (30S ribosomal protein S5 OS=Mycoplasma capricolum subsp. capricolum (strain California kid / ATCC 27343 / NCTC 10154) GN=rpsE PE=3 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 3.888e-16 Identity = 48/157 (30.57%), Postives = 78/157 (49.68%), Query Frame = -1 Query: 204 TKKEKVKDGFEEXXXXXXXXXXXXXXXXQLKFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRER 674 ++++ VKD FEE +F A+ ++K+ +A++N+V+V + + T PH G FGA K++++PA GTG+IAGG R V+E++G+ + K LGSNNA+N RAT + M+ + V R Sbjct: 36 SRQKVVKDEFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGNKKGLVGMGTGKANEVPEAIKKAIKEAKKNLVSVTL-RNTTVPHEVLGTFGAGKILIKPAKVGTGIIAGGPARAVIELSGISDVYAKSLGSNNAINMIRATFEGLSSMQTLKRVQELR 191
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_MICLU (30S ribosomal protein S5 OS=Micrococcus luteus GN=rpsE PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.888e-16 Identity = 46/99 (46.46%), Postives = 62/99 (62.63%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ +A+++ VP T PH G+ A V+LRPASPGT VIAGG VR VLE AG+ + L K +GS NA+N R TV ++K+K + V+ RG Sbjct: 58 QKAVEEAKKSFFRVPRVGS-TIPHLVQGEDAAGVVLLRPASPGTAVIAGGPVRAVLECAGIHDVLSKSMGSVNAINIVRGTVEGLKKLKSPQAVAARRG 155
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CLOD6 (30S ribosomal protein S5 OS=Clostridium difficile (strain 630) GN=rpsE PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.888e-16 Identity = 41/99 (41.41%), Postives = 62/99 (62.63%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ DA++N++ VP+ T PH G FGA +++ PA GTGVIAGG R VLE+AG+++ K LGSNN N AT+ + +K ++++ RG Sbjct: 64 KKAVEDAKKNLIVVPIVG-TTIPHEVRGHFGAGNILIMPAVEGTGVIAGGPARAVLELAGLKDVRAKSLGSNNPRNMVNATIEGLNSLKTVEDIAKLRG 161
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PEDPA (30S ribosomal protein S5 OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=rpsE PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.078e-16 Identity = 40/100 (40.00%), Postives = 67/100 (67.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+ AR++++ VP+ T PH + G +G +++++PA G+GV AGGAVR V+E+AG+++ K+LGSN A+N RAT ++ M+ EV+ RG+ Sbjct: 62 RKAVETARKSLIEVPIVG-TTLPHEAVGVYGGGRILMKPALEGSGVAAGGAVRAVMELAGIDDVTSKRLGSNTAVNVVRATFEGLKSMRNAEEVAALRGV 160
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_HAES2 (30S ribosomal protein S5 OS=Haemophilus somnus (strain 2336) GN=rpsE PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.078e-16 Identity = 46/99 (46.46%), Postives = 63/99 (63.64%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ ARRN++TV + + T H G ++V ++PAS GTG+IAGGA+R VLE+AGV N L K GS N +N RAT+ A+ MK V+ +RG Sbjct: 61 QKAMEKARRNMITVALNEG-TLQHPIKGSHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVRNVLSKAYGSTNPINVVRATIDALANMKSPEMVAAKRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_HAES1 (30S ribosomal protein S5 OS=Haemophilus somnus (strain 129Pt) GN=rpsE PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.078e-16 Identity = 46/99 (46.46%), Postives = 63/99 (63.64%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ ARRN++TV + + T H G ++V ++PAS GTG+IAGGA+R VLE+AGV N L K GS N +N RAT+ A+ MK V+ +RG Sbjct: 61 QKAMEKARRNMITVALNEG-TLQHPIKGSHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVRNVLSKAYGSTNPINVVRATIDALANMKSPEMVAAKRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_ANADE (30S ribosomal protein S5 OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=rpsE PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.078e-16 Identity = 45/99 (45.45%), Postives = 62/99 (62.63%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K A++N+ VP+ T PH G FG+ +V+L+PA GTGVIAGGAVR VLE AGV N L K GS N N +ATV +++++ + +R RG Sbjct: 63 RKGGDQAKKNLFRVPLVG-TTIPHEVLGHFGSGRVLLKPAGEGTGVIAGGAVRAVLEAAGVRNVLTKSQGSRNPHNVLKATVAGLKRLRSVEDSARLRG 160
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_COLP3 (30S ribosomal protein S5 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=rpsE PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.633e-16 Identity = 47/99 (47.47%), Postives = 62/99 (62.63%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ A RNIVT+ + K T H G +KV ++PAS GTG+IAGGA+R VLE+AGV+N L K GS N +N RATV A+ M ++ +RG Sbjct: 64 QKAMEKAHRNIVTIDL-KGTTLQHVITGKHSGSKVFMKPASEGTGIIAGGAMRAVLEVAGVQNVLSKAYGSTNPINVVRATVSALVNMHSPEGMAAKRG 161 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |