CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CLONN (30S ribosomal protein S5 OS=Clostridium novyi (strain NT) GN=rpsE PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.930e-15 Identity = 41/99 (41.41%), Postives = 64/99 (64.65%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K DA++++V V M T PH G+FG +V++ PA+ GTGVIAGG VR VLE+AG+++ K LGSNN N AT+ + +++ ++++ RG Sbjct: 60 RKGIEDAKKHLVEVAMVD-TTVPHAIQGEFGRGRVLIMPATEGTGVIAGGPVRAVLELAGLKDVRAKSLGSNNPKNMVGATINGLSRLRTAEQIAKLRG 157
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CLOAB (30S ribosomal protein S5 OS=Clostridium acetobutylicum GN=rpsE PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.930e-15 Identity = 42/99 (42.42%), Postives = 62/99 (62.63%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K DA++N+V V + T PH G+FG +V++ PAS GTGVIAGG VR VLE+AG+ + K LGSNN N AT+ + +++ +++ RG Sbjct: 60 RKGIEDAKKNLVEVAIVG-TTVPHEIYGEFGTGRVLIMPASEGTGVIAGGPVRAVLELAGLNDVRAKSLGSNNPRNMVNATINGLSRLRTVEQIAALRG 157
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_ALKMQ (30S ribosomal protein S5 OS=Alkaliphilus metalliredigens (strain QYMF) GN=rpsE PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.930e-15 Identity = 42/99 (42.42%), Postives = 65/99 (65.66%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K A++N++ VP T T PH G FGA V++ PA GTG+IAGG VR VLE+AG+++ K LG+NN+ N AT+ ++++K+ +V++ RG Sbjct: 64 RKGIQAAKKNLLLVP-TVGTTVPHEVIGHFGAGNVLIMPAKEGTGIIAGGPVRAVLELAGIKDVRAKSLGTNNSRNMVSATMDGLRQLKRAEDVAKLRG 161
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_ACTP2 (30S ribosomal protein S5 OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=rpsE PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.930e-15 Identity = 45/99 (45.45%), Postives = 62/99 (62.63%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ ARRN++ V + + T H G ++V ++PAS GTG+IAGGA+R VLE+AGV N L K GS N +N RAT+ A+ MK V+ +RG Sbjct: 61 QKAMEKARRNMINVALNEG-TLQHPVKGSHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVRNVLSKAYGSTNPINVVRATIDALANMKSPEMVAAKRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_ACIBL (30S ribosomal protein S5 OS=Acidobacteria bacterium (strain Ellin345) GN=rpsE PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.930e-15 Identity = 43/99 (43.43%), Postives = 67/99 (67.68%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K A++N+V V +++ + PH+ G +G+ +VML+PA GTGVIAGGAVR V+ AGV+N L K +G+ N N +AT A+++++ REV+ RG Sbjct: 66 RKGIESAKKNLVKVNLSQ-TSIPHQVLGRYGSGRVMLKPAPEGTGVIAGGAVRAVMTSAGVQNVLTKSIGTTNPHNVIKATFEALKQLRDRREVAAGRG 163
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_SULNB (30S ribosomal protein S5 OS=Sulfurovum sp. (strain NBC37-1) GN=rpsE PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.520e-15 Identity = 43/89 (48.31%), Postives = 62/89 (69.66%), Query Frame = -1 Query: 231 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMK 497 +K+ DA +N+V V + K T H + F A++++LRPAS GTGVIAGGA R VLE+AG+++ L K +GSNN N RAT+ A+ ++K Sbjct: 64 KKAVDDAHKNLVKVNI-KGTTIAHDIEHKFNASRIVLRPASEGTGVIAGGAARPVLELAGIQDVLSKSIGSNNPNNLVRATIQALTRIK 151
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_MESSB (30S ribosomal protein S5 OS=Mesorhizobium sp. (strain BNC1) GN=rpsE PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.520e-15 Identity = 39/100 (39.00%), Postives = 64/100 (64.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+ A+R+++ VP+ + T H G GA +V++R A PGTG+IAGG +R V E GV++ + K LGS+N N RAT A+++ ++++ +RGI Sbjct: 69 RKATESAKRDLIFVPLREGRTLHHDVGGHHGAGRVLMRAAKPGTGIIAGGPMRAVFETLGVQDVVAKSLGSSNPYNMVRATFDALKRQMHPKDIAAQRGI 168
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_LACS1 (30S ribosomal protein S5 OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=rpsE PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.520e-15 Identity = 44/100 (44.00%), Postives = 63/100 (63.00%), Query Frame = -1 Query: 198 KSAVDA-RRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 494 + AVDA R+N++ VP T T PH G + +++ML+PA G+GV AGGAVR V+E+AG+ + K LGSN +N RAT + MK V++ RG+ Sbjct: 61 RKAVDAARKNLIEVP-TVGTTLPHEVIGQYSGSRIMLKPAIAGSGVAAGGAVRAVMELAGIADVTSKSLGSNTPVNVVRATFDGLVNMKDAESVAKLRGV 159
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_DESAD (30S ribosomal protein S5 OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=rpsE PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.520e-15 Identity = 43/99 (43.43%), Postives = 65/99 (65.66%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K++ AR+ +++VP+ T P+ G +GA +VML+PAS GTG+IAGG VR VLE+ GV + L K +G+NN N RAT+ + ++ EV + RG Sbjct: 58 RKASEKARKEMISVPLLDG-TLPYEVLGRYGAGRVMLKPASKGTGIIAGGPVRAVLEVVGVHDILTKAIGTNNPHNVLRATIAGLASLRSADEVGQLRG 155
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PSYIN (30S ribosomal protein S5 OS=Psychromonas ingrahamii (strain 37) GN=rpsE PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.292e-15 Identity = 45/100 (45.00%), Postives = 63/100 (63.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 QK+ ARRNI V + K T H G +KV ++PAS GTG+IAGGA+R VLE+ GV+N L K GS N +N RAT+ A++ M +++ +RG+ Sbjct: 62 QKAMEKARRNIRDVQL-KGNTLQHPIKGRHSGSKVYMQPASEGTGIIAGGAMRAVLEVVGVQNVLSKAYGSTNPINVVRATLDALENMNSPEQIAAKRGL 160 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |