CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PASMU (30S ribosomal protein S5 OS=Pasteurella multocida GN=rpsE PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.292e-15 Identity = 45/99 (45.45%), Postives = 62/99 (62.63%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ ARRN++ V + + T H G ++V ++PAS GTG+IAGGA+R VLE+AGV N L K GS N +N RAT+ A+ MK V+ +RG Sbjct: 61 QKAMEKARRNMINVALNEG-TLQHPIKGAHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVRNVLSKAYGSTNPINVVRATIDALANMKSPEMVAAKRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_DESVM (30S ribosomal protein S5 OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=rpsE PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.292e-15 Identity = 43/102 (42.16%), Postives = 66/102 (64.71%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K+ A++++V +P+ T P+ G+FGA VML+PAS GTG+IAGGAVR V+E GV + L K +G+NN N RAT+ + ++ VS+ RG+ + Sbjct: 58 RKATERAKKDMVQIPLVDG-TLPYEILGEFGAGCVMLKPASKGTGIIAGGAVRAVMEAVGVTDVLAKAIGTNNPHNVLRATMAGLTSLRSAEYVSQLRGMKL 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_BUCAP (30S ribosomal protein S5 OS=Buchnera aphidicola subsp. Schizaphis graminum GN=rpsE PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.292e-15 Identity = 42/98 (42.86%), Postives = 60/98 (61.22%), Query Frame = -1 Query: 204 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRER 497 QK+ ARRN+VT+P+ T H G + + ++PAS GTG+IAGGA+R VLE+AG+ N L K GS N +N RAT+ + MK ++ +R Sbjct: 62 QKAMEKARRNMVTIPLVNK-TLQHSLKGSHTGSNIFMKPASDGTGIIAGGAMRAVLEVAGIHNVLAKTYGSTNPINVVRATMNGLTNMKSPEMIAAKR 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_BUCAI (30S ribosomal protein S5 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=rpsE PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.292e-15 Identity = 42/98 (42.86%), Postives = 60/98 (61.22%), Query Frame = -1 Query: 204 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRER 497 QK+ ARRN++T+P+ T H G + V ++PAS GTG+IAGGA+R VLE+AG+ N L K GS N +N RAT+ + MK ++ +R Sbjct: 62 QKAMEQARRNMITIPLVNK-TLQHSLKGSHTGSNVFMKPASDGTGIIAGGAMRAVLEVAGIHNVLAKTYGSTNPINVVRATMNGLVNMKSPEMIAAKR 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_BORGA (30S ribosomal protein S5 OS=Borrelia garinii GN=rpsE PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.292e-15 Identity = 46/99 (46.46%), Postives = 62/99 (62.63%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +KS AR+N+ VP+ K T PH G F AKV+++PA+ GTGVIAGG VR V+E GV + L K LGSNN++N +AT A + +V+ RG Sbjct: 60 KKSLTSARKNLRFVPIRKG-TLPHEVIGCFKKAKVLIKPATHGTGVIAGGPVRAVMEALGVHDILSKSLGSNNSMNVVKATFKAFDLVLNAEKVAEMRG 157
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_BORBU (30S ribosomal protein S5 OS=Borrelia burgdorferi GN=rpsE PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.292e-15 Identity = 46/99 (46.46%), Postives = 62/99 (62.63%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +KS AR+N+ VP+ K T PH G F AKV+++PA+ GTGVIAGG VR V+E GV + L K LGSNN++N +AT A + +V+ RG Sbjct: 60 KKSLTSARKNLRFVPIRKG-TLPHEVIGCFKKAKVLIKPATHGTGVIAGGPVRAVMEALGVHDILSKSLGSNNSMNVVKATFKAFDLVLNAEKVAEMRG 157
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_XANOR (30S ribosomal protein S5 OS=Xanthomonas oryzae pv. oryzae GN=rpsE PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.299e-15 Identity = 54/159 (33.96%), Postives = 76/159 (47.80%), Query Frame = -1 Query: 201 KTKKEKVKDGFEEXXXXXXXXXXXXXXXXQLKFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 677 + ++EKV DG E Q F A+ +QKS AR+N+ TV + T H GAA+V ++PAS GTGVIAGGA+R VLE GV+N L K +GS N +N RAT+ + +++ V+ +RG Sbjct: 14 RNREEKVDDGMIEKLVAVNRVSKTVKGGRQFTFTALTVVGDGLGKVGFGYGKAREVPVAIQKSMEQARKNLATVDLNNG-TLWHAVKSGHGAARVYMQPASEGTGVIAGGAMRAVLEAVGVKNVLAKAVGSRNPINLVRATLKGLSEVQSPARVAAKRG 171
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_XANOP (30S ribosomal protein S5 OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=rpsE PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.299e-15 Identity = 54/159 (33.96%), Postives = 76/159 (47.80%), Query Frame = -1 Query: 201 KTKKEKVKDGFEEXXXXXXXXXXXXXXXXQLKFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 677 + ++EKV DG E Q F A+ +QKS AR+N+ TV + T H GAA+V ++PAS GTGVIAGGA+R VLE GV+N L K +GS N +N RAT+ + +++ V+ +RG Sbjct: 14 RNREEKVDDGMIEKLVAVNRVSKTVKGGRQFTFTALTVVGDGLGKVGFGYGKAREVPVAIQKSMEQARKNLATVDLNNG-TLWHAVKSGHGAARVYMQPASEGTGVIAGGAMRAVLEAVGVKNVLAKAVGSRNPINLVRATLKGLSEVQSPARVAAKRG 171
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_XANOM (30S ribosomal protein S5 OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=rpsE PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.299e-15 Identity = 54/159 (33.96%), Postives = 76/159 (47.80%), Query Frame = -1 Query: 201 KTKKEKVKDGFEEXXXXXXXXXXXXXXXXQLKFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 677 + ++EKV DG E Q F A+ +QKS AR+N+ TV + T H GAA+V ++PAS GTGVIAGGA+R VLE GV+N L K +GS N +N RAT+ + +++ V+ +RG Sbjct: 14 RNREEKVDDGMIEKLVAVNRVSKTVKGGRQFTFTALTVVGDGLGKVGFGYGKAREVPVAIQKSMEQARKNLATVDLNNG-TLWHAVKSGHGAARVYMQPASEGTGVIAGGAMRAVLEAVGVKNVLAKAVGSRNPINLVRATLKGLSEVQSPARVAAKRG 171
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_XANCP (30S ribosomal protein S5 OS=Xanthomonas campestris pv. campestris GN=rpsE PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.299e-15 Identity = 54/159 (33.96%), Postives = 76/159 (47.80%), Query Frame = -1 Query: 201 KTKKEKVKDGFEEXXXXXXXXXXXXXXXXQLKFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 677 + ++EKV DG E Q F A+ +QKS AR+N+ TV + T H GAA+V ++PAS GTGVIAGGA+R VLE GV+N L K +GS N +N RAT+ + +++ V+ +RG Sbjct: 14 RNREEKVDDGMIEKLVAVNRVSKTVKGGRQFTFTALTVVGDGLGKVGFGYGKAREVPVAIQKSMEQARKNLATVDLNNG-TLWHAVKSGHGAARVYMQPASEGTGVIAGGAMRAVLEAVGVKNVLAKAVGSRNPINLVRATLKGLSEVQSPARVAAKRG 171 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |