CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_XANCB (30S ribosomal protein S5 OS=Xanthomonas campestris pv. campestris (strain B100) GN=rpsE PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.299e-15 Identity = 54/159 (33.96%), Postives = 76/159 (47.80%), Query Frame = -1 Query: 201 KTKKEKVKDGFEEXXXXXXXXXXXXXXXXQLKFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 677 + ++EKV DG E Q F A+ +QKS AR+N+ TV + T H GAA+V ++PAS GTGVIAGGA+R VLE GV+N L K +GS N +N RAT+ + +++ V+ +RG Sbjct: 14 RNREEKVDDGMIEKLVAVNRVSKTVKGGRQFTFTALTVVGDGLGKVGFGYGKAREVPVAIQKSMEQARKNLATVDLNNG-TLWHAVKSGHGAARVYMQPASEGTGVIAGGAMRAVLEAVGVKNVLAKAVGSRNPINLVRATLKGLSEVQSPARVAAKRG 171
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_XANC8 (30S ribosomal protein S5 OS=Xanthomonas campestris pv. campestris (strain 8004) GN=rpsE PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.299e-15 Identity = 54/159 (33.96%), Postives = 76/159 (47.80%), Query Frame = -1 Query: 201 KTKKEKVKDGFEEXXXXXXXXXXXXXXXXQLKFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 677 + ++EKV DG E Q F A+ +QKS AR+N+ TV + T H GAA+V ++PAS GTGVIAGGA+R VLE GV+N L K +GS N +N RAT+ + +++ V+ +RG Sbjct: 14 RNREEKVDDGMIEKLVAVNRVSKTVKGGRQFTFTALTVVGDGLGKVGFGYGKAREVPVAIQKSMEQARKNLATVDLNNG-TLWHAVKSGHGAARVYMQPASEGTGVIAGGAMRAVLEAVGVKNVLAKAVGSRNPINLVRATLKGLSEVQSPARVAAKRG 171
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_XANC5 (30S ribosomal protein S5 OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=rpsE PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.299e-15 Identity = 54/159 (33.96%), Postives = 76/159 (47.80%), Query Frame = -1 Query: 201 KTKKEKVKDGFEEXXXXXXXXXXXXXXXXQLKFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 677 + ++EKV DG E Q F A+ +QKS AR+N+ TV + T H GAA+V ++PAS GTGVIAGGA+R VLE GV+N L K +GS N +N RAT+ + +++ V+ +RG Sbjct: 14 RNREEKVDDGMIEKLVAVNRVSKTVKGGRQFTFTALTVVGDGLGKVGFGYGKAREVPVAIQKSMEQARKNLATVDLNNG-TLWHAVKSGHGAARVYMQPASEGTGVIAGGAMRAVLEAVGVKNVLAKAVGSRNPINLVRATLKGLSEVQSPARVAAKRG 171
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_XANAC (30S ribosomal protein S5 OS=Xanthomonas axonopodis pv. citri GN=rpsE PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.299e-15 Identity = 54/159 (33.96%), Postives = 76/159 (47.80%), Query Frame = -1 Query: 201 KTKKEKVKDGFEEXXXXXXXXXXXXXXXXQLKFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 677 + ++EKV DG E Q F A+ +QKS AR+N+ TV + T H GAA+V ++PAS GTGVIAGGA+R VLE GV+N L K +GS N +N RAT+ + +++ V+ +RG Sbjct: 14 RNREEKVDDGMIEKLVAVNRVSKTVKGGRQFTFTALTVVGDGLGKVGFGYGKAREVPVAIQKSMEQARKNLATVDLNNG-TLWHAVKSGHGAARVYMQPASEGTGVIAGGAMRAVLEAVGVKNVLAKAVGSRNPINLVRATLKGLSEVQSPARVAAKRG 171
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PSEHT (30S ribosomal protein S5 OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=rpsE PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.299e-15 Identity = 42/100 (42.00%), Postives = 63/100 (63.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 QK+ ARRN++ V + T H G ++V ++PAS GTG+IAGGA+R VLE+ GV+N L K GS N +N RAT+ A++ M + ++ +RG+ Sbjct: 63 QKAMEKARRNMINVDLNGN-TLQHPVKGRHAGSQVFMKPASEGTGIIAGGAMRAVLEVTGVQNVLSKCYGSTNPINVVRATISALENMNSPQSIAAKRGL 161
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PARUW (30S ribosomal protein S5 OS=Protochlamydia amoebophila (strain UWE25) GN=rpsE PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.299e-15 Identity = 41/100 (41.00%), Postives = 64/100 (64.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K AR+N+++ P T+ T PH + A V+L+PA GTGVIAG VR VLE+AG+++ + K LGS+N +N +AT A+Q++ E+ + RG+ Sbjct: 69 RKGGEAARKNMISCP-TEGTTIPHEVTVQWDGASVLLKPAPFGTGVIAGSKVRAVLELAGIKDVMAKNLGSSNPINQVKATFQAIQQLLTRDEIKQRRGV 167
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PARDP (30S ribosomal protein S5 OS=Paracoccus denitrificans (strain Pd 1222) GN=rpsE PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.299e-15 Identity = 41/99 (41.41%), Postives = 61/99 (61.62%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ A+R+++ VP+ T H +G GA KV++R A PGTG+IAGG +R V EM GV++ + K GS N N RAT+ ++K R V++ RG Sbjct: 70 RKATEQAKRSLIRVPLRDGRTLHHDIEGRHGAGKVIMRTAVPGTGIIAGGPMRAVFEMLGVQDVVAKSQGSQNPYNMIRATIDGLKKEASPRNVAQRRG 168
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PARD8 (30S ribosomal protein S5 OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=rpsE PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.299e-15 Identity = 42/99 (42.42%), Postives = 64/99 (64.65%), Query Frame = -1 Query: 198 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 494 K A++N++ VP+ K T PH FG A+V++RPAS GTGV AGGA+R VLE G+ + L K GS+N N +AT+ A+ +++ +V++ RG+ Sbjct: 65 KGVEAAKKNLIKVPVHKG-TIPHEQLAKFGGAQVLIRPASHGTGVKAGGAMRAVLESVGITDVLAKSKGSSNPHNLVKATIAALGELRSPFDVAQNRGV 162
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_HAEIN (30S ribosomal protein S5 OS=Haemophilus influenzae GN=rpsE PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.299e-15 Identity = 45/99 (45.45%), Postives = 62/99 (62.63%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ ARRN++ V + + T H G ++V ++PAS GTG+IAGGA+R VLE+AGV N L K GS N +N RAT+ A+ MK V+ +RG Sbjct: 61 QKAMEKARRNMINVALNEG-TLQHPVKGVHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVRNVLSKAYGSTNPINVVRATIDALANMKSPEMVAAKRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_HAEIG (30S ribosomal protein S5 OS=Haemophilus influenzae (strain PittGG) GN=rpsE PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.299e-15 Identity = 45/99 (45.45%), Postives = 62/99 (62.63%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ ARRN++ V + + T H G ++V ++PAS GTG+IAGGA+R VLE+AGV N L K GS N +N RAT+ A+ MK V+ +RG Sbjct: 61 QKAMEKARRNMINVALNEG-TLQHPVKGVHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVRNVLSKAYGSTNPINVVRATIDALANMKSPEMVAAKRG 158 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |