CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_STRM5 (30S ribosomal protein S5 OS=Stenotrophomonas maltophilia (strain R551-3) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.578e-15 Identity = 54/159 (33.96%), Postives = 75/159 (47.17%), Query Frame = -1 Query: 201 KTKKEKVKDGFEEXXXXXXXXXXXXXXXXQLKFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 677 + ++EKV DG E Q F A+ +QKS AR+N+V+V + + DG GAA+V ++PAS GTGVIAGGA+R VLE GV+N L K GS N +N RATV + + ++ +RG Sbjct: 14 RNREEKVDDGMIEKLVAVNRVSKTVKGGRQFTFTALTVVGDGEGKVGFGYGKAREVPVAIQKSMEQARKNLVSVDLNNGTLWHTIKDGH-GAARVFMQPASEGTGVIAGGAMRAVLEAVGVKNVLAKATGSRNPINLVRATVKGLSAAQSPARIAAKRG 171
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_SERP5 (30S ribosomal protein S5 OS=Serratia proteamaculans (strain 568) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.578e-15 Identity = 44/99 (44.44%), Postives = 61/99 (61.62%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ ARR ++ V + T H G ++V ++PAS GTG+IAGGA+R VLE+AGV N L K GS N +N RAT+ A++ MK V+ +RG Sbjct: 61 QKAMEKARRAMINVALNSG-TLQHPVKGAHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIAALEDMKSPEMVAAKRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_RALSO (30S ribosomal protein S5 OS=Ralstonia solanacearum GN=rpsE PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.578e-15 Identity = 45/99 (45.45%), Postives = 61/99 (61.62%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ +ARR +V VP+ K T H G GAAKV++ PA GTGVIAGG +R + E+ GV N + K GS N N RAT+ ++KM E++ +RG Sbjct: 67 QKAMDEARRKMVKVPL-KNGTLQHEVIGKHGAAKVLMAPAKEGTGVIAGGPMRAIFEVMGVTNIVTKSHGSTNPYNMVRATLDGLRKMSTPAEIAAKRG 164
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_OENOB (30S ribosomal protein S5 OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.578e-15 Identity = 41/102 (40.20%), Postives = 67/102 (65.69%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K+ DA+R+++ VP T T PH+ G G KV+L+PAS G+GV AGG+ R ++E+AG+ + K LGS+ A+N RAT ++ +K+ + V+ RG+ + Sbjct: 63 RKAVEDAKRHLIKVP-TVGTTIPHQVLGVDGGGKVLLKPASEGSGVAAGGSTRPIMELAGIPDVTAKSLGSSTAVNVVRATFDGLKNLKEAKVVAALRGVSL 163
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_HAHCH (30S ribosomal protein S5 OS=Hahella chejuensis (strain KCTC 2396) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.578e-15 Identity = 45/100 (45.00%), Postives = 67/100 (67.00%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMT-KYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ AR+N++TV + L +P ++ G+AKV ++PAS GTG+IAGGA+R VLE+AGV+N L K GS N +N RAT ++ M+ E++ +RG Sbjct: 62 QKAMDAARKNMITVTLNGNTLQYPVKAR--HGSAKVFMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVRATFEGLKAMQAPEEIAAKRG 159
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_ENTS8 (30S ribosomal protein S5 OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.578e-15 Identity = 44/99 (44.44%), Postives = 61/99 (61.62%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ ARRN++ V + + T H G ++V ++PAS GTG+IAGGA+R VLE+AGV N L K GS N +N RAT+ + MK V+ +RG Sbjct: 61 QKAMEKARRNMINVALN-HGTLQHPVKGAHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLANMKSPEMVAAKRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_DINSH (30S ribosomal protein S5 OS=Dinoroseobacter shibae (strain DFL 12) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.578e-15 Identity = 41/99 (41.41%), Postives = 61/99 (61.62%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ A+R ++ VP+ + T H +G GA KVM+R A GTG+IAGG +R V EM GV++ + K +GS N N RAT+ ++K R V++ RG Sbjct: 70 RKATEQAKRQMIRVPLREGRTLHHDIEGRHGAGKVMMRTAPQGTGIIAGGPMRAVFEMLGVQDVVAKSIGSQNPYNMIRATLDGLRKETSPRMVAQRRG 168
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_DESVV (30S ribosomal protein S5 OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.578e-15 Identity = 43/99 (43.43%), Postives = 63/99 (63.64%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ A+++++ VP+ T P+ G FGA V+L+PAS GTG+IAGGAVR V+E GV + L K +G+NN N RATV + ++ EV + RG Sbjct: 58 RKATERAKKSMIEVPLIDG-TLPYEILGRFGAGHVLLKPASKGTGIIAGGAVRAVMEAVGVTDVLTKAIGTNNPHNVLRATVAGLASLRSAEEVGQLRG 155
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_DESVH (30S ribosomal protein S5 OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.578e-15 Identity = 43/99 (43.43%), Postives = 63/99 (63.64%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ A+++++ VP+ T P+ G FGA V+L+PAS GTG+IAGGAVR V+E GV + L K +G+NN N RATV + ++ EV + RG Sbjct: 58 RKATERAKKSMIEVPLIDG-TLPYEILGRFGAGHVLLKPASKGTGIIAGGAVRAVMEAVGVTDVLTKAIGTNNPHNVLRATVAGLASLRSAEEVGQLRG 155
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CHLAB (30S ribosomal protein S5 OS=Chlamydophila abortus GN=rpsE PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.578e-15 Identity = 37/100 (37.00%), Postives = 62/100 (62.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K AR+N++T+ + + PH D A+++L+PA PGTG++AG +R++LEMAGV+N + K LGSNN +N +A A+ + ++V R + Sbjct: 63 RKGGEAARKNLITIESLEGDSIPHEVLVDQDGAQLLLKPAKPGTGIVAGSRIRLILEMAGVKNIVAKSLGSNNPMNQVKAAFKALLSLSSRKDVLTRRKV 162 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |