CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CAMC5 (30S ribosomal protein S5 OS=Campylobacter curvus (strain 525.92) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.578e-15 Identity = 41/89 (46.07%), Postives = 62/89 (69.66%), Query Frame = -1 Query: 231 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMK 497 +K+ DA +NI+ V + K T PH + + A++++LRPAS GTGVIAGG R ++E+AG+++ L K LGSNN+ N RAT+ A+ +K Sbjct: 59 RKAIDDAFKNIIHVKL-KGSTIPHDVEVKYNASRILLRPASEGTGVIAGGGARPIIELAGIKDILTKSLGSNNSANVVRATIKALSLLK 146
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_BUCCC (30S ribosomal protein S5 OS=Buchnera aphidicola subsp. Cinara cedri GN=rpsE PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.578e-15 Identity = 41/99 (41.41%), Postives = 65/99 (65.66%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ AR+N++ +P+ K T H G + + ++PAS GTG+IAGGA+R VLE+AG++N L K GS N +N RAT+ ++K++ +S++RG Sbjct: 61 QKAMEKARKNMIIIPLFKN-TIQHSVTGLHTGSFIFMKPASEGTGIIAGGAMRSVLEVAGIQNILAKIYGSTNPINVVRATLNGLKKIRSPEMISKKRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_YERE8 (30S ribosomal protein S5 OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.251e-14 Identity = 44/99 (44.44%), Postives = 61/99 (61.62%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ ARR ++ V + T H G ++V ++PAS GTG+IAGGA+R VLE+AGV N L K GS N +N RAT+ A++ MK V+ +RG Sbjct: 61 QKAMEKARRAMINVALDNG-TLQHPVKGAHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIAALEDMKSPEMVAAKRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_STRMK (30S ribosomal protein S5 OS=Stenotrophomonas maltophilia (strain K279a) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.251e-14 Identity = 45/99 (45.45%), Postives = 61/99 (61.62%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QKS AR+N+V+V + + DG GAA+V ++PAS GTGVIAGGA+R VLE GV+N L K GS N +N RATV + + ++ +RG Sbjct: 74 QKSMEQARKNLVSVDLNNGTLWHTIKDGH-GAARVFMQPASEGTGVIAGGAMRAVLEAVGVKNVLAKATGSRNPINLVRATVKGLSAAQSPARIAAKRG 171
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_SODGM (30S ribosomal protein S5 OS=Sodalis glossinidius (strain morsitans) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.251e-14 Identity = 45/99 (45.45%), Postives = 61/99 (61.62%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ ARRN++ V + T H G ++V ++PAS GTG+IAGGA+R VLE+AGV N L K GS N +N RAT+ A+ MK V+ +RG Sbjct: 61 QKAMEKARRNMMNVALNSG-TLQHPIKGVHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDALGNMKSPEMVAAKRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_RALPJ (30S ribosomal protein S5 OS=Ralstonia pickettii (strain 12J) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.251e-14 Identity = 46/99 (46.46%), Postives = 60/99 (60.61%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ +ARR +V VP+ K T H G GAAKV + PA GTGVIAGG +R + E+ GV N + K GS N N RAT+ ++KM EV+ +RG Sbjct: 67 QKAMDEARRKMVKVPL-KNGTLQHEVVGKHGAAKVQMMPAKDGTGVIAGGPMRAIFEVMGVTNIVTKSHGSTNPYNMVRATLDGLRKMSTPAEVAAKRG 164
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_MYCPU (30S ribosomal protein S5 OS=Mycoplasma pulmonis GN=rpsE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.251e-14 Identity = 38/100 (38.00%), Postives = 62/100 (62.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+ DA+ +++TVP+ T PH G F ++KV+++ A G G+IA GAVR V+E+AG + K GS +N +ATV ++KM+ E++ RG+ Sbjct: 123 KKAIKDAQNHLITVPIINESTVPHEMSGKFLSSKVIIKSAPKGKGIIASGAVRAVMELAGYTDIYAKSYGSRTKMNTVKATVETLKKMRTVEEIAALRGL 222
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_MYCPE (30S ribosomal protein S5 OS=Mycoplasma penetrans GN=rpsE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.251e-14 Identity = 40/98 (40.82%), Postives = 58/98 (59.18%), Query Frame = -1 Query: 204 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRER 497 +K+ A+ N+ V M K T H G GA KV+++PA GTGVIAGG +++VLE+ G ++ K LG N +LN RAT+ +Q K +E + R Sbjct: 128 RKALKSAKNNMYKVKMNKNFTLYHEVIGKHGAGKVLIKPAPKGTGVIAGGPIKVVLELCGFKDVYSKNLGKNTSLNMVRATIKGLQMQKSPKEYATLR 225
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_DESDG (30S ribosomal protein S5 OS=Desulfovibrio desulfuricans (strain G20) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.251e-14 Identity = 41/99 (41.41%), Postives = 63/99 (63.64%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ A++ +V VP+ T P+ G FGA +V+L+PAS GTG+IAGGAVR ++E G+ + L K +G+NN N RAT+ + ++ VS+ RG Sbjct: 58 RKATERAKKGMVQVPLVDG-TLPYEVLGAFGAGRVLLKPASKGTGIIAGGAVRAIMEAVGIHDVLAKAIGTNNPHNVLRATMAGLTSLRSAEYVSQLRG 155
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CHLFF (30S ribosomal protein S5 OS=Chlamydophila felis (strain Fe/C-56) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.251e-14 Identity = 36/100 (36.00%), Postives = 62/100 (62.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K AR+N++T+ + PH D A+++L+PA PGTG++AG +R++LEMAG++N + K LGSNN +N +A A+ + ++V + R + Sbjct: 63 RKGGEAARKNLITIETLDGDSIPHEVLVDQDGAQLLLKPAKPGTGIVAGSRIRLILEMAGIKNIVAKSLGSNNPMNQVKAAFKALLSLSSRKDVLQRRRV 162 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |