CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CAMC1 (30S ribosomal protein S5 OS=Campylobacter concisus (strain 13826) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.251e-14 Identity = 41/89 (46.07%), Postives = 63/89 (70.79%), Query Frame = -1 Query: 231 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMK 497 +K+ DA +NI+ V + K T PH + + A++++LRPAS GTGVIAGG+ R ++E+AG+++ L K LGSNN+ N RAT+ A+ +K Sbjct: 59 RKAIDDAFKNIIHVKI-KGTTIPHDVEVKYNASRMLLRPASEGTGVIAGGSARPIIELAGIKDILTKSLGSNNSANVVRATIKALSLLK 146
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_SALTO (30S ribosomal protein S5 OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.634e-14 Identity = 42/101 (41.58%), Postives = 62/101 (61.39%), Query Frame = -1 Query: 192 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 494 K +A+++ VP + PH G+ A V+L+PAS GTGVIAGG VR VLE AG+ + L K LGS+N +N AT+ A++ ++ V+ RG+P+ Sbjct: 88 KGVEEAKKHFFKVPRIGQ-SIPHPVQGEDAAGVVLLKPASAGTGVIAGGPVRAVLECAGIHDVLSKSLGSSNPINIVHATLAALKGLESPEAVAARRGLPV 187
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_RHOSK (30S ribosomal protein S5 OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.634e-14 Identity = 39/99 (39.39%), Postives = 61/99 (61.62%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ A+R ++ V + T H +G GA KV++R A PGTG+IAGG +R V EM G+++ + K LGS N N RAT+ +++ R+V++ RG Sbjct: 72 RKATEQAKRQMIRVALRDGRTLHHDQEGRHGAGKVVMRAAVPGTGIIAGGPMRAVFEMLGIQDVVAKSLGSQNPYNMIRATMDGLKRESSPRQVAQRRG 170
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_RHOS4 (30S ribosomal protein S5 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.634e-14 Identity = 39/99 (39.39%), Postives = 61/99 (61.62%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ A+R ++ V + T H +G GA KV++R A PGTG+IAGG +R V EM G+++ + K LGS N N RAT+ +++ R+V++ RG Sbjct: 72 RKATEQAKRQMIRVALRDGRTLHHDQEGRHGAGKVVMRAAVPGTGIIAGGPMRAVFEMLGIQDVVAKSLGSQNPYNMIRATMDGLKRESSPRQVAQRRG 170
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_RHOS1 (30S ribosomal protein S5 OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.634e-14 Identity = 39/99 (39.39%), Postives = 61/99 (61.62%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ A+R ++ V + T H +G GA KV++R A PGTG+IAGG +R V EM G+++ + K LGS N N RAT+ +++ R+V++ RG Sbjct: 72 RKATEQAKRQMIRVALRDGRTLHHDQEGRHGAGKVVMRAAVPGTGIIAGGPMRAVFEMLGIQDVVAKSLGSQNPYNMIRATMDGLKRESSPRQVAQRRG 170
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PARL1 (30S ribosomal protein S5 OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.634e-14 Identity = 42/99 (42.42%), Postives = 61/99 (61.62%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ A+R ++ VP+ + T H DG GA +V+LR A PGTG+IAGG +R V E GV++ + K LGS+N N RAT A++ + R V+ RG Sbjct: 68 RKATEAAKRAMIRVPLREGRTLHHDVDGRHGAGRVVLRAAPPGTGIIAGGPMRAVFETLGVQDVVAKSLGSSNPYNMVRATFDALKNEQSPRMVAARRG 166
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_ONYPE (30S ribosomal protein S5 OS=Onion yellows phytoplasma GN=rpsE PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.634e-14 Identity = 41/103 (39.81%), Postives = 66/103 (64.08%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGG-AVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K+ A++ +V +P+T T PH + G FGA+K L+PAS GTG++AGG A R +LE+ G+ + L K GS ++N RA + +Q ++ EV++ RGI + Sbjct: 65 KKALEKAKKQLVRIPITG-TTIPHDTIGRFGASKFFLKPASKGTGIVAGGKAARTILELVGINDVLTKTFGSRTSINVIRAVMDGLQSLRTKEEVAKLRGITL 166
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_NITSB (30S ribosomal protein S5 OS=Nitratiruptor sp. (strain SB155-2) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.634e-14 Identity = 44/89 (49.44%), Postives = 62/89 (69.66%), Query Frame = -1 Query: 231 KSAVD-ARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMK 494 K A+D A +NI TV + K T H + + A+K++L+PAS GTGVIAGGA R VLE+AG+++ L K LGSNN RAT+ A++++K Sbjct: 59 KKAIDNAFKNITTVNI-KGTTIAHDIEHKYNASKILLKPASQGTGVIAGGAARPVLELAGIQDILTKSLGSNNPATLVRATIEALERIK 146
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_FRATW (30S ribosomal protein S5 OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.634e-14 Identity = 44/101 (43.56%), Postives = 65/101 (64.36%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTK-YLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 QK+ +A++N+V+V + L +P S+ GA+KV ++PAS GTG+IAGGA+R V E GV N L K GS N N RAT+ + K+K E++ +RG+ Sbjct: 61 QKAMENAKKNMVSVNLNNDTLWYPVMSN--HGASKVFMQPASAGTGIIAGGAMRSVFEAVGVHNVLAKTYGSTNPANVVRATIAGLAKIKSPDEIAEKRGL 159
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_FRATT (30S ribosomal protein S5 OS=Francisella tularensis subsp. tularensis GN=rpsE PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.634e-14 Identity = 44/101 (43.56%), Postives = 65/101 (64.36%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTK-YLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 QK+ +A++N+V+V + L +P S+ GA+KV ++PAS GTG+IAGGA+R V E GV N L K GS N N RAT+ + K+K E++ +RG+ Sbjct: 61 QKAMENAKKNMVSVNLNNDTLWYPVMSN--HGASKVFMQPASAGTGIIAGGAMRSVFEAVGVHNVLAKTYGSTNPANVVRATIAGLAKIKSPDEIAEKRGL 159 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |