CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_FRATO (30S ribosomal protein S5 OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.634e-14 Identity = 44/101 (43.56%), Postives = 65/101 (64.36%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTK-YLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 QK+ +A++N+V+V + L +P S+ GA+KV ++PAS GTG+IAGGA+R V E GV N L K GS N N RAT+ + K+K E++ +RG+ Sbjct: 61 QKAMENAKKNMVSVNLNNDTLWYPVMSN--HGASKVFMQPASAGTGIIAGGAMRSVFEAVGVHNVLAKTYGSTNPANVVRATIAGLAKIKSPDEIAEKRGL 159
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_FRATN (30S ribosomal protein S5 OS=Francisella tularensis subsp. novicida (strain U112) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.634e-14 Identity = 44/101 (43.56%), Postives = 65/101 (64.36%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTK-YLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 QK+ +A++N+V+V + L +P S+ GA+KV ++PAS GTG+IAGGA+R V E GV N L K GS N N RAT+ + K+K E++ +RG+ Sbjct: 61 QKAMENAKKNMVSVNLNNDTLWYPVMSN--HGASKVFMQPASAGTGIIAGGAMRSVFEAVGVHNVLAKTYGSTNPANVVRATIAGLAKIKSPDEIAEKRGL 159
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_FRATF (30S ribosomal protein S5 OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.634e-14 Identity = 44/101 (43.56%), Postives = 65/101 (64.36%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTK-YLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 QK+ +A++N+V+V + L +P S+ GA+KV ++PAS GTG+IAGGA+R V E GV N L K GS N N RAT+ + K+K E++ +RG+ Sbjct: 61 QKAMENAKKNMVSVNLNNDTLWYPVMSN--HGASKVFMQPASAGTGIIAGGAMRSVFEAVGVHNVLAKTYGSTNPANVVRATIAGLAKIKSPDEIAEKRGL 159
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_FRAT1 (30S ribosomal protein S5 OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.634e-14 Identity = 44/101 (43.56%), Postives = 65/101 (64.36%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTK-YLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 QK+ +A++N+V+V + L +P S+ GA+KV ++PAS GTG+IAGGA+R V E GV N L K GS N N RAT+ + K+K E++ +RG+ Sbjct: 61 QKAMENAKKNMVSVNLNNDTLWYPVMSN--HGASKVFMQPASAGTGIIAGGAMRSVFEAVGVHNVLAKTYGSTNPANVVRATIAGLAKIKSPDEIAEKRGL 159
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_BUCBP (30S ribosomal protein S5 OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=rpsE PE=3 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.634e-14 Identity = 41/98 (41.84%), Postives = 62/98 (63.27%), Query Frame = -1 Query: 204 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRER 497 QK+ ARRN++ VP+ T + G + + + ++PAS GTG+IAGGA+R VLE+AGV N L K GS N +N RAT++ ++ MK ++ +R Sbjct: 62 QKAMEKARRNMIQVPLNNG-TLQYSVTGSYTGSYIFMKPASNGTGIIAGGAMRSVLEVAGVHNVLAKTYGSTNPINVVRATMLVLESMKSPEMIALKR 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_BLOPB (30S ribosomal protein S5 OS=Blochmannia pennsylvanicus (strain BPEN) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.634e-14 Identity = 41/99 (41.41%), Postives = 61/99 (61.62%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QKS ARRN+V + + K T H G + +++ ++PAS GTG+IAG +R +LE+ G+ N L K GS N +N RAT+ A+Q MK ++ +RG Sbjct: 61 QKSMEKARRNMVIISLYKG-TLQHAVKGVYTGSRIYMQPASEGTGIIAGTTMRAILEVVGIHNVLAKAYGSTNPINIVRATINALQSMKSPEMIAEKRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_BART1 (30S ribosomal protein S5 OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=rpsE PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.634e-14 Identity = 39/100 (39.00%), Postives = 62/100 (62.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+ A+R ++ VP+ T H +G GA +V+LR AS GTG+IAGG +R + E G+++ + K LGS+N N RAT A++ R+++ +RGI Sbjct: 66 RKATESAKRGMIYVPLRSGRTLHHDLEGRHGAGRVLLRSASAGTGIIAGGPMRAIFEALGMQDVVAKSLGSSNPYNMVRATFDALKHQMHPRDIAAQRGI 165
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_SHIDS (30S ribosomal protein S5 OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=rpsE PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.134e-14 Identity = 43/99 (43.43%), Postives = 60/99 (60.61%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ ARRN++ V + T H G ++V ++PAS GTG+IAGGA+R VLE+AGV N L K GS N +N RAT+ ++ M V+ +RG Sbjct: 61 QKAMEKARRNMINVALNNG-TLQHPVKGAHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_RALEJ (30S ribosomal protein S5 OS=Ralstonia eutropha (strain JMP134) GN=rpsE PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.134e-14 Identity = 45/99 (45.45%), Postives = 60/99 (60.61%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ +ARR +V V + K T H G GAAKV++ PA GTGVIAGG +R + E+ GV N + K GS N N RAT+ +QKM E++ +RG Sbjct: 67 QKAMDEARRKMVKVSL-KNGTLQHEVVGKHGAAKVLMMPAKEGTGVIAGGPMRAIFEVMGVTNVVTKSHGSTNPYNMVRATLDGLQKMSTPSEIAAKRG 164
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_NITOC (30S ribosomal protein S5 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=rpsE PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.134e-14 Identity = 43/99 (43.43%), Postives = 63/99 (63.64%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ +AR+N+++VP+ T H GAAKV ++PAS GTG+IAGGA+R V E+ GV N L K +GS N +N +ATV + +M ++ +RG Sbjct: 63 QKAMENARKNMISVPLEGD-TLQHPITARHGAAKVHMQPASEGTGIIAGGAMRAVFEVVGVHNVLAKCIGSANPVNVVQATVKGLVQMSSPEAIAAKRG 160 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |