CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_RUBXD (30S ribosomal protein S5 OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=rpsE PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.787e-14 Identity = 41/99 (41.41%), Postives = 64/99 (64.65%), Query Frame = -1 Query: 198 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 494 K AR + VPM + T PH G++ +++V+L+PAS GTGVIAGG VR VLE+AG+++ L K LGS +N RAT +++++ ++ + RG+ Sbjct: 99 KGQEKARHAMFDVPM-RNTTIPHEVVGEYESSRVLLKPASEGTGVIAGGGVRAVLELAGIKDVLTKALGSTTPVNLVRATEDGLRQLRTKAQIEQIRGV 196
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_RHOS5 (30S ribosomal protein S5 OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=rpsE PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.787e-14 Identity = 38/99 (38.38%), Postives = 61/99 (61.62%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ A+R ++ V + T H +G GA KV++R A PGTG+IAGG +R V EM G+++ + K +GS N N RAT+ +++ R+V++ RG Sbjct: 72 RKATEQAKRQMIRVALRDGRTLHHDQEGRHGAGKVVMRAAVPGTGIIAGGPMRAVFEMLGIQDVVAKSMGSQNPYNMIRATMDGLKRESSPRQVAQRRG 170
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_RALEH (30S ribosomal protein S5 OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=rpsE PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.787e-14 Identity = 45/99 (45.45%), Postives = 60/99 (60.61%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ +ARR +V V + K T H G GAAKV++ PA GTGVIAGG +R + E+ GV N + K GS N N RAT+ +QKM E++ +RG Sbjct: 67 QKAMDEARRKMVKVSL-KNGTLQHEVVGKHGAAKVLMMPAKEGTGVIAGGPMRAIFEVMGVTNVVTKSHGSTNPYNMVRATLDGLQKMSTPGEIAAKRG 164
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PSEE4 (30S ribosomal protein S5 OS=Pseudomonas entomophila (strain L48) GN=rpsE PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.787e-14 Identity = 43/99 (43.43%), Postives = 63/99 (63.64%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ ARRN++ V + K T + + GA+KV ++PAS GTG+IAGGA+R VLE+AGV+N L K GS N +N AT ++ M+ ++ +RG Sbjct: 62 QKAMEAARRNMIQVDL-KGTTLQYATKAAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVHATFKGLKAMQSPESIAAKRG 159
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_NITMU (30S ribosomal protein S5 OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=rpsE PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.787e-14 Identity = 44/99 (44.44%), Postives = 61/99 (61.62%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ +ARR ++ V + K T H G GAAKV ++PAS GTG+IAGG +R + E+ GV N L K +GS N N RAT+ +Q M E++ +RG Sbjct: 72 QKAMDEARRKMIKVSL-KNGTLQHPVIGRHGAAKVYMQPASEGTGIIAGGPMRAIFEVMGVHNILAKCIGSTNPYNVVRATLNGLQAMSNPAEIAAKRG 169
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_METPP (30S ribosomal protein S5 OS=Methylibium petroleiphilum (strain PM1) GN=rpsE PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.787e-14 Identity = 44/93 (47.31%), Postives = 61/93 (65.59%), Query Frame = -1 Query: 201 ARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 479 ARR++V V + K T H G+ GAAKV+L PA+PGTG+IAGG +R V E+ GV + + K LGS+N N RAT A+++ EV+ +RG Sbjct: 73 ARRDMVKVSL-KNGTVHHNVTGEHGAAKVLLAPAAPGTGIIAGGPMRAVFEVMGVTDIVAKSLGSSNPYNMVRATFNALRRSTTPSEVASKRG 164
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_METCA (30S ribosomal protein S5 OS=Methylococcus capsulatus GN=rpsE PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.787e-14 Identity = 43/100 (43.00%), Postives = 62/100 (62.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 QKS AR+N+ V + T H GAAKV ++PAS GTG+IAGGA+R V E+ GV N L K +G+NN +N RAT+ + ++ + V+ +RG+ Sbjct: 64 QKSMEQARKNMRKVALNGQ-TLHHPVTAAAGAAKVHMQPASEGTGIIAGGAMRAVFEVVGVHNVLAKCIGTNNPINVVRATIKGLTALRDPKSVAAKRGM 162
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_LACC3 (30S ribosomal protein S5 OS=Lactobacillus casei (strain ATCC 334) GN=rpsE PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.787e-14 Identity = 40/100 (40.00%), Postives = 65/100 (65.00%), Query Frame = -1 Query: 198 KSAVDA-RRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 494 + AVDA +++++ VP+ T PH G FGA +V+L+PA G+GV AGGA+R V+E+AG+ + K LG N +N RAT+ + +++ +V+ RG+ Sbjct: 62 RKAVDAAKKSLIEVPIVG-TTIPHEVIGHFGAGEVLLKPAEEGSGVAAGGAIRSVMELAGIADITSKSLGRNTPINMIRATMDGLTQLRTREQVAELRGV 160
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_FRATH (30S ribosomal protein S5 OS=Francisella tularensis subsp. holarctica (strain LVS) GN=rpsE PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.787e-14 Identity = 44/101 (43.56%), Postives = 65/101 (64.36%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTK-YLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 QK+ +A++N+V+V + L +P S+ GA+KV ++PAS GTG+IAGGA+R V E GV N L K GS N N RAT+ + K+K E++ +RG+ Sbjct: 61 QKAMENAKKNMVSVNLNNDTLWYPVVSN--HGASKVFMQPASAGTGIIAGGAMRSVFEAVGVHNVLAKTYGSTNPANVVRATIAGLAKIKSPDEIAEKRGL 159
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_ECOUT (30S ribosomal protein S5 OS=Escherichia coli (strain UTI89 / UPEC) GN=rpsE PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.787e-14 Identity = 43/99 (43.43%), Postives = 60/99 (60.61%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ ARRN++ V + T H G ++V ++PAS GTG+IAGGA+R VLE+AGV N L K GS N +N RAT+ ++ M V+ +RG Sbjct: 61 QKAMEKARRNMINVALNNG-TLQHPVKGVHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRG 158 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |