CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CAMJR (30S ribosomal protein S5 OS=Campylobacter jejuni (strain RM1221) GN=rpsE PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.639e-14 Identity = 41/89 (46.07%), Postives = 62/89 (69.66%), Query Frame = -1 Query: 231 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMK 497 +K+ DA +NIV V TK T H + + A++++L+PAS GTGVIAGG+ R ++E+AG+++ L K LGSNN+ N RAT+ A+ +K Sbjct: 59 RKAVDDAFKNIVEVK-TKGSTIAHDVEVKYNASRILLKPASEGTGVIAGGSTRPIVELAGIKDILTKSLGSNNSANVVRATIKALTMLK 146
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CAMJJ (30S ribosomal protein S5 OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=rpsE PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.639e-14 Identity = 41/89 (46.07%), Postives = 62/89 (69.66%), Query Frame = -1 Query: 231 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMK 497 +K+ DA +NIV V TK T H + + A++++L+PAS GTGVIAGG+ R ++E+AG+++ L K LGSNN+ N RAT+ A+ +K Sbjct: 59 RKAVDDAFKNIVEVK-TKGSTIAHDVEVKYNASRILLKPASEGTGVIAGGSTRPIVELAGIKDILTKSLGSNNSANVVRATIKALTMLK 146
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CAMJE (30S ribosomal protein S5 OS=Campylobacter jejuni GN=rpsE PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.639e-14 Identity = 41/89 (46.07%), Postives = 62/89 (69.66%), Query Frame = -1 Query: 231 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMK 497 +K+ DA +NIV V TK T H + + A++++L+PAS GTGVIAGG+ R ++E+AG+++ L K LGSNN+ N RAT+ A+ +K Sbjct: 59 RKAVDDAFKNIVEVK-TKGSTIAHDVEVKYNASRILLKPASEGTGVIAGGSTRPIVELAGIKDILTKSLGSNNSANVVRATIKALTMLK 146
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CAMJD (30S ribosomal protein S5 OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=rpsE PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.639e-14 Identity = 41/89 (46.07%), Postives = 62/89 (69.66%), Query Frame = -1 Query: 231 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMK 497 +K+ DA +NIV V TK T H + + A++++L+PAS GTGVIAGG+ R ++E+AG+++ L K LGSNN+ N RAT+ A+ +K Sbjct: 59 RKAVDDAFKNIVEVK-TKGSTIAHDVEVKYNASRILLKPASEGTGVIAGGSTRPIVELAGIKDILTKSLGSNNSANVVRATIKALTMLK 146
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_CAMJ8 (30S ribosomal protein S5 OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=rpsE PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.639e-14 Identity = 41/89 (46.07%), Postives = 62/89 (69.66%), Query Frame = -1 Query: 231 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMK 497 +K+ DA +NIV V TK T H + + A++++L+PAS GTGVIAGG+ R ++E+AG+++ L K LGSNN+ N RAT+ A+ +K Sbjct: 59 RKAVDDAFKNIVEVK-TKGSTIAHDVEVKYNASRILLKPASEGTGVIAGGSTRPIVELAGIKDILTKSLGSNNSANVVRATIKALTMLK 146
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_THELT (30S ribosomal protein S5 OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=rpsE PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.753e-14 Identity = 43/100 (43.00%), Postives = 65/100 (65.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+ AR ++V +P+ K T PH G A+KV+LRPA+PGTG+IAG VR V+E+AGV+N L K LGS ++N A AT+ ++ + + ++ R I Sbjct: 67 RKAIAAARASVVEIPLYK-TTIPHEVFGRQDASKVLLRPAAPGTGIIAGSTVRAVVELAGVQNVLTKCLGSTASVNLALATLNGLKDLVSPEKAAKLRDI 165
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_SOLUE (30S ribosomal protein S5 OS=Solibacter usitatus (strain Ellin6076) GN=rpsE PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.753e-14 Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = -1 Query: 198 TFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 437 T PH+ G F +++V+L+PASPGTGVIAGGAVR V+ GV N L K +G N N +AT+VA++ ++ V+ RG+ Sbjct: 85 TIPHQVLGVFASSQVLLKPASPGTGVIAGGAVRAVITACGVPNVLTKSIGRRNPHNVVKATIVALEMLRDRNTVAEMRGL 164
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PSEPW (30S ribosomal protein S5 OS=Pseudomonas putida (strain W619) GN=rpsE PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.753e-14 Identity = 43/99 (43.43%), Postives = 63/99 (63.64%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ ARRN++ V + K T + + GA+KV ++PAS GTG+IAGGA+R VLE+AGV+N L K GS N +N AT ++ M+ ++ +RG Sbjct: 62 QKAMEAARRNMIQVDL-KGTTLQYATKAAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVYATFKGLKAMQSPESIAAKRG 159
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PSEPK (30S ribosomal protein S5 OS=Pseudomonas putida (strain KT2440) GN=rpsE PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.753e-14 Identity = 43/99 (43.43%), Postives = 63/99 (63.64%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ ARRN++ V + K T + + GA+KV ++PAS GTG+IAGGA+R VLE+AGV+N L K GS N +N AT ++ M+ ++ +RG Sbjct: 62 QKAMEAARRNMIQVDL-KGTTLQYATKAAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVYATFKGLKAMQSPESIAAKRG 159
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PSEPG (30S ribosomal protein S5 OS=Pseudomonas putida (strain GB-1) GN=rpsE PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.753e-14 Identity = 43/99 (43.43%), Postives = 63/99 (63.64%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ ARRN++ V + K T + + GA+KV ++PAS GTG+IAGGA+R VLE+AGV+N L K GS N +N AT ++ M+ ++ +RG Sbjct: 62 QKAMEAARRNMIQVDL-KGTTLQYATKAAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVYATFKGLKAMQSPESIAAKRG 159 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |