CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_ERYLH (30S ribosomal protein S5 OS=Erythrobacter litoralis (strain HTCC2594) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.108e-14 Identity = 40/99 (40.40%), Postives = 59/99 (59.60%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ AR+ ++ V + + T H +G FGA KV +R A PGTG+IAGG +R V E GV + + K +G++N N RAT A+Q + V++ RG Sbjct: 160 QKATAAARKKMIRVALKEGRTLHHDGNGRFGAGKVTVRTAPPGTGIIAGGPMRAVFESLGVADVVTKSVGTSNPYNMIRATFDALQDQTSPKSVAQRRG 258
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_DEIRA (30S ribosomal protein S5 OS=Deinococcus radiodurans GN=rpsE PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.108e-14 Identity = 40/99 (40.40%), Postives = 61/99 (61.62%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ AR+N++TVP+ T PH G+ ++V+L+PA PGTGVIAG R + E+AG+ N L K+LGS N +N A A + ++ ++V RG Sbjct: 67 EKAKAVARKNMITVPVENG-TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGITNMLSKELGSRNKVNVAYAVFDGFKNLRTAKQVRNLRG 164
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_AYWBP (30S ribosomal protein S5 OS=Aster yellows witches'-broom phytoplasma (strain AYWB) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.108e-14 Identity = 40/101 (39.60%), Postives = 64/101 (63.37%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGG-AVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+ A++ +V +P+ T PH + G FGA+K L+PAS GTG++AGG A R +LE+ G+ + L K GS ++N RA + +Q ++ EV++ RGI Sbjct: 79 KKALEKAKKQLVRIPIVG-TTIPHDTIGRFGASKFFLKPASKGTGIVAGGKAARTILELVGINDVLTKTFGSRTSINVIRAVMDGLQSLRTKEEVAKLRGI 178
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_THEM4 (30S ribosomal protein S5 OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.059e-13 Identity = 43/100 (43.00%), Postives = 62/100 (62.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+ ARRN+ VP+ T PH G AAKV+L+PASPGTG+I+ G VR V+E+AG+ N L K GS N + A+ATV ++ + +++ R I Sbjct: 65 RKALSAARRNVFKVPIHNG-TIPHEIVGRQDAAKVLLKPASPGTGIISNGTVRAVVELAGIHNILTKSSGSTNPVVLAQATVNGLKNLLSLEKIAELRDI 163
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_ROSDO (30S ribosomal protein S5 OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.059e-13 Identity = 39/99 (39.39%), Postives = 60/99 (60.61%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ A+R ++ V + + T H +G GA KV++R A GTG+IAGG +R V EM GV++ + K +GS N N RAT+ ++K R V++ RG Sbjct: 71 RKATEQAKRQMIRVQLREGRTLHHDMEGRHGAGKVVMRSAPEGTGIIAGGPMRAVFEMLGVKDVVSKSIGSQNPYNMIRATMDGLRKESSPRSVAQRRG 169
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PSEMY (30S ribosomal protein S5 OS=Pseudomonas mendocina (strain ymp) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.059e-13 Identity = 45/100 (45.00%), Postives = 64/100 (64.00%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMT-KYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ ARRN++ V + L +P +S GA+KV ++PAS GTG+IAGGA+R VLE+AGV+N L K GS N +N AT ++ M+ V+ +RG Sbjct: 62 QKAMEAARRNMIQVDLNGTTLQYPIKSA--HGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVHATFKGLKTMQSPESVAAKRG 159
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_HELHP (30S ribosomal protein S5 OS=Helicobacter hepaticus GN=rpsE PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.059e-13 Identity = 40/89 (44.94%), Postives = 62/89 (69.66%), Query Frame = -1 Query: 231 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMK 497 +K+ DA +NI+ V + K T H + + A++++L+PAS GTGVIAGG+ R V+E+AG+++ L K LGSNN N RAT+ A+ ++K Sbjct: 58 KKAIDDAFKNIIKVNI-KGTTIAHDIEHKYNASRILLKPASEGTGVIAGGSTRPVIELAGIKDILTKSLGSNNPYNVVRATIDALARIK 145
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_GLUDA (30S ribosomal protein S5 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.059e-13 Identity = 40/99 (40.40%), Postives = 58/99 (58.59%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ A+R ++ VPM + T H G FGA KV+LR A GTG+IAGG +R V E G+ + + K LG+ N N +AT A+++ R V+ RG Sbjct: 72 RKATDRAKRAMIRVPMKEGRTLHHDVAGHFGAGKVVLRSADAGTGIIAGGPMRAVFESLGINDVVAKSLGTRNPHNMVKATFAALERCASPRTVANRRG 170
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_XYLFT (30S ribosomal protein S5 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13 Identity = 51/159 (32.08%), Postives = 75/159 (47.17%), Query Frame = -1 Query: 201 KTKKEKVKDGFEEXXXXXXXXXXXXXXXXQLKFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 677 ++++EK+ DG E Q F A+ +QKS AR+ + V + T H + GAA V ++PAS GTGVIAGGA+R VLE GV+N L K +GS N +N RAT+ ++ M+ ++ +RG Sbjct: 12 RSREEKIDDGMIEKLVAVNRVSKTVKGGRQFTFTALTIVGNGEGSVGFGYGKAREVPVAIQKSMEYARKRMSNVSLNNG-TLWHPVKANHGAASVFMKPASEGTGVIAGGAMRAVLEAVGVKNVLAKAIGSRNPINLVRATLKGLEDMQSPTHIALKRG 169
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_XYLF2 (30S ribosomal protein S5 OS=Xylella fastidiosa (strain M23) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13 Identity = 51/159 (32.08%), Postives = 75/159 (47.17%), Query Frame = -1 Query: 201 KTKKEKVKDGFEEXXXXXXXXXXXXXXXXQLKFRAIXXXXXXXXXXXXXXXXXXXXXXXVQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 677 ++++EK+ DG E Q F A+ +QKS AR+ + V + T H + GAA V ++PAS GTGVIAGGA+R VLE GV+N L K +GS N +N RAT+ ++ M+ ++ +RG Sbjct: 12 RSREEKIDDGMIEKLVAVNRVSKTVKGGRQFTFTALTIVGNGEGSVGFGYGKAREVPVAIQKSMEYARKRMSNVSLNNG-TLWHPVKANHGAASVFMKPASEGTGVIAGGAMRAVLEAVGVKNVLAKAIGSRNPINLVRATLKGLEDMQSPTHIALKRG 169 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |