CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_RHILO (30S ribosomal protein S5 OS=Rhizobium loti GN=rpsE PE=3 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13 Identity = 38/100 (38.00%), Postives = 61/100 (61.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+ A+R+++ VP+ T H +G +GA +V+LR A GTG+IAGG +R V E G+ + + K +GS+N N RAT A++ ++V+ RGI Sbjct: 71 RKATESAKRDMIFVPLRSGRTLHHDVEGRWGAGRVLLRAAKQGTGIIAGGPMRAVFETLGMHDVVAKSMGSSNPYNMVRATFDALKSQMHPKDVAAARGI 170
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_RALME (30S ribosomal protein S5 OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13 Identity = 44/99 (44.44%), Postives = 59/99 (59.60%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ +ARR +V V + K T H G GAAKV++ PA GTGVIAGG +R + E+ GV N + K GS N N RAT+ + KM E++ +RG Sbjct: 67 QKAMDEARRKMVKVAL-KNGTLQHEVVGRHGAAKVLMMPAKEGTGVIAGGPMRAIFEVMGVTNVVTKSHGSTNPYNMVRATLDGLTKMSTPAEIAAKRG 164
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PSEF5 (30S ribosomal protein S5 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13 Identity = 42/99 (42.42%), Postives = 61/99 (61.62%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ ARRN++ V + T + GA+KV ++PAS GTG+IAGGA+R VLE+AGV+N L K GS N +N AT ++ M+ ++ +RG Sbjct: 62 QKAMEAARRNMIQVDLNG-TTLQYAMKSAHGASKVYMQPASEGTGIIAGGAMRAVLEVAGVQNVLAKCYGSTNPVNVVHATFKGLKAMQSPESIAAKRG 159
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_PORGI (30S ribosomal protein S5 OS=Porphyromonas gingivalis GN=rpsE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13 Identity = 41/99 (41.41%), Postives = 60/99 (60.61%), Query Frame = -1 Query: 198 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 494 K A++N++ VP+ T PH +G A V L+PA+ GTGV AGGA+R VL+ GV + L K GS+N N +AT+ A+ +M+ V++ RGI Sbjct: 67 KGVEAAKKNLIRVPVHNG-TIPHEQAASYGGASVFLKPATTGTGVKAGGAMRAVLDSVGVTDVLAKSKGSSNPHNLVKATIQALAEMRSPLMVAQNRGI 164
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_OCHA4 (30S ribosomal protein S5 OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13 Identity = 39/100 (39.00%), Postives = 61/100 (61.00%), Query Frame = -1 Query: 198 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGI 497 +K+ A+R+++ VP+ T H +G GA KV+LR A G G+IAGG +R V E GV++ + K LGS+N N RAT A++ ++++ +RGI Sbjct: 70 RKATEAAKRDMIFVPLRSGRTLHHDVEGRHGAGKVLLRAAPAGKGIIAGGPMRAVFETLGVQDVVAKSLGSSNPYNMVRATFDALKHQMHPKDIAAQRGI 169
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_BURVG (30S ribosomal protein S5 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13 Identity = 42/99 (42.42%), Postives = 59/99 (59.60%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ ARRN+ VP+ K T H G GA+ V+L PA GTGVIAGG +R V ++ GV+N + K GS N N RAT+ ++K +++ +RG Sbjct: 67 QKAMEQARRNMFKVPL-KNGTLQHEVHGKHGASAVLLAPAKAGTGVIAGGPMRAVFDVMGVQNVVAKSHGSTNPYNLVRATLDGLRKQSTPADIAAKRG 164
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_BURS3 (30S ribosomal protein S5 OS=Burkholderia sp. (strain 383) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13 Identity = 42/99 (42.42%), Postives = 59/99 (59.60%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ ARRN+ VP+ K T H G GA+ V+L PA GTGVIAGG +R V ++ GV+N + K GS N N RAT+ ++K +++ +RG Sbjct: 67 QKAMEQARRNMFKVPL-KNGTLQHEVHGKHGASAVLLAPAKAGTGVIAGGPMRAVFDVMGVQNVVAKSHGSTNPYNLVRATLDGLRKQSTPADIAAKRG 164
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_BURPS (30S ribosomal protein S5 OS=Burkholderia pseudomallei GN=rpsE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13 Identity = 42/99 (42.42%), Postives = 59/99 (59.60%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ ARRN+ VP+ K T H G GA+ V+L PA GTGVIAGG +R V ++ GV+N + K GS N N RAT+ ++K +++ +RG Sbjct: 67 QKAMEQARRNMFKVPL-KNGTLQHEVHGKHGASTVLLAPAKDGTGVIAGGPMRAVFDVMGVQNVVAKSHGSTNPYNLVRATLDGLRKQSTPADIAAKRG 164
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_BURP8 (30S ribosomal protein S5 OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13 Identity = 42/99 (42.42%), Postives = 59/99 (59.60%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ ARRN+ VP+ K T H G GA+ V+L PA GTGVIAGG +R V ++ GV+N + K GS N N RAT+ ++K +++ +RG Sbjct: 67 QKAMEQARRNMFKVPL-KNGTLQHEVHGKHGASTVLLAPAKDGTGVIAGGPMRAVFDVMGVQNVVAKSHGSTNPYNLVRATLDGLRKQSTPADIAAKRG 164
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_BURP6 (30S ribosomal protein S5 OS=Burkholderia pseudomallei (strain 668) GN=rpsE PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13 Identity = 42/99 (42.42%), Postives = 59/99 (59.60%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 QK+ ARRN+ VP+ K T H G GA+ V+L PA GTGVIAGG +R V ++ GV+N + K GS N N RAT+ ++K +++ +RG Sbjct: 67 QKAMEQARRNMFKVPL-KNGTLQHEVHGKHGASTVLLAPAKDGTGVIAGGPMRAVFDVMGVQNVVAKSHGSTNPYNLVRATLDGLRKQSTPADIAAKRG 164 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |