CX674593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_NOCFA (30S ribosomal protein S5 OS=Nocardia farcinica GN=rpsE PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.203e-19 Identity = 51/102 (50.00%), Postives = 67/102 (65.69%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 QK +AR+ VPM T H G+ A VMLRPASPGTGVIAGGA R VLE AG+ + L K LGS+NA+N ATV A++++++ EV+ RG+P+ Sbjct: 98 QKGVEEARKGFFRVPMIGS-TITHPVQGEAAAGVVMLRPASPGTGVIAGGAARAVLECAGIHDILAKSLGSDNAINVVHATVAALKQLQRPEEVAARRGLPL 198
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_ANOFW (30S ribosomal protein S5 OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=rpsE PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.203e-19 Identity = 46/99 (46.46%), Postives = 70/99 (70.71%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ DA++N++TVP+ T PH G FGA +++L+PAS GTGVIAGG R VLE+AG+ + L K +GSN +N RAT+ ++++K+ EV++ RG Sbjct: 61 RKAIEDAKKNLITVPIVG-TTIPHEVIGHFGAGEIILKPASEGTGVIAGGPARAVLELAGISDILSKSIGSNTPINMVRATIDGLKQLKRAEEVAKLRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_SALRD (30S ribosomal protein S5 OS=Salinibacter ruber (strain DSM 13855) GN=rpsE PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.877e-19 Identity = 51/101 (50.50%), Postives = 67/101 (66.34%), Query Frame = -1 Query: 192 KSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 494 K A DA++N++ VPM T PH+ G A KV+L+PASPGTGVIAGG VR VLE AG N L K LG++N N +AT+ A+ + + EV+R R IP+ Sbjct: 70 KGADDAKKNVIRVPMRDG-TIPHKVVGKQDAGKVLLKPASPGTGVIAGGGVRAVLECAGYRNVLTKSLGTSNPHNQVKATINALAETEDALEVARRRDIPL 169
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_GEOSW (30S ribosomal protein S5 OS=Geobacillus sp. (strain WCH70) GN=rpsE PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.877e-19 Identity = 47/99 (47.47%), Postives = 69/99 (69.70%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ DA++N++ VP+ T PH G FGA K++L+PAS GTGVIAGG R VLE+AG+ + L K +GSN +N RATV ++++K+ +V+R RG Sbjct: 61 RKAIEDAKKNLIEVPIVG-TTIPHEVIGHFGAGKIILKPASEGTGVIAGGPARAVLELAGISDILSKSIGSNTPINMVRATVDGLKQLKRAEDVARLRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_ANATD (30S ribosomal protein S5 OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=rpsE PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.877e-19 Identity = 47/99 (47.47%), Postives = 72/99 (72.73%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ DA+++++ VP+ T PH + GDFGA+KV+++PA GTGVIAGGAVR V E+AG+++ K LGSNN N AT+ A++++++ EV+R RG Sbjct: 63 RKAIEDAKKHLIEVPIVG-TTIPHEAIGDFGASKVLIKPAPEGTGVIAGGAVRAVCELAGIKDIRTKSLGSNNPANVVHATIEALKQLRRPEEVARIRG 160
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_THEPX (30S ribosomal protein S5 OS=Thermoanaerobacter sp. (strain X514) GN=rpsE PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19 Identity = 47/102 (46.08%), Postives = 72/102 (70.59%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K+ DA+++++ VP+ T PH G+FGA KV+L+PA GTGVIAGG VR VLE AG+++ L K LGS+NA N AT+ +++++ +V++ RGIP+ Sbjct: 62 RKAIEDAKKHLIKVPIVG-TTIPHEVIGEFGAGKVLLKPAREGTGVIAGGPVRAVLESAGIKDVLTKSLGSSNATNMVYATIEGLKRLRTAEDVAKLRGIPV 162
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_THEP3 (30S ribosomal protein S5 OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=rpsE PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19 Identity = 47/102 (46.08%), Postives = 72/102 (70.59%), Query Frame = -1 Query: 192 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERGIPM 497 +K+ DA+++++ VP+ T PH G+FGA KV+L+PA GTGVIAGG VR VLE AG+++ L K LGS+NA N AT+ +++++ +V++ RGIP+ Sbjct: 62 RKAIEDAKKHLIKVPIVG-TTIPHEVIGEFGAGKVLLKPAREGTGVIAGGPVRAVLESAGIKDVLTKSLGSSNATNMVYATIEGLKRLRTAEDVAKLRGIPV 162
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_SYNWW (30S ribosomal protein S5 OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=rpsE PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19 Identity = 47/99 (47.47%), Postives = 71/99 (71.72%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ +A++N+++VP+ T PH G FGA +V+L+PAS GTGVIAGG VR VLE AG+++ L K LGS+NA N AT+ ++ +K+ +V+R+RG Sbjct: 61 RKAIENAKKNMLSVPLIDGRTIPHEILGIFGAGQVLLKPASEGTGVIAGGPVRAVLEAAGIKDILTKSLGSDNATNIVHATMEGLRSLKRVEDVARQRG 159
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_BACSU (30S ribosomal protein S5 OS=Bacillus subtilis GN=rpsE PE=1 SV=3) HSP 1 Score: 95.5153 bits (236), Expect = 3.758e-19 Identity = 48/99 (48.48%), Postives = 68/99 (68.69%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K+ DA++N++ VPM T PH G FGA ++L+PAS GTGVIAGG VR VLE+AGV + L K LGSN +N RAT+ + ++K+ +V++ RG Sbjct: 61 RKAVEDAKKNLIEVPMVG-TTIPHEIIGRFGAGNILLKPASEGTGVIAGGPVRAVLELAGVADILSKSLGSNTPINMIRATLQGLSELKRAEDVAKLRG 158
BLAST of CX674593 vs. ExPASy Swiss-Prot
Match: RS5_MOOTA (30S ribosomal protein S5 OS=Moorella thermoacetica (strain ATCC 39073) GN=rpsE PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.409e-19 Identity = 50/99 (50.51%), Postives = 66/99 (66.67%), Query Frame = -1 Query: 201 QKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVQKMKQWREVSRERG 497 +K DA++N++ VPM T PH G FGA KV+L+PA+PGTGVIAGG VR VLE AG+ + L K LGS N N AT+ ++ +K+ EV+R RG Sbjct: 61 RKGIEDAKKNLIKVPMVG-TTIPHEIIGHFGAGKVLLKPAAPGTGVIAGGPVRAVLEAAGIRDILTKSLGSANPNNAVYATIEGLKGLKRAEEVARLRG 158 The following BLAST results are available for this feature:
BLAST of CX674593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674593 ID=CX674593; Name=CX674593; organism=Citrus sinensis; type=EST; length=818bpback to top |