EY665376

Overview
NameEY665376
Unique NameEY665376
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1228
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665376 vs. ExPASy Swiss-Prot
Match: PRS8_DROME (26S protease regulatory subunit 8 OS=Drosophila melanogaster GN=Pros45 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 2.690e-20
Identity = 38/74 (51.35%), Postives = 47/74 (63.51%), Query Frame = 1
Query:  307 LHMILPSKLDPLVNLRKAGMVPDSTYDMVAALDARLDVIKEVNELPNLRPKLFESLERTQGAGVLKEGTQNKAK 528
            LH ILP+K+DPLV+L     VPDSTY+MV  LD ++  IKEV ELP   P+LF++L   Q  GVL  G     K
Sbjct:  122 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 195          

HSP 2 Score: 49.2914 bits (116), Expect = 2.690e-20
Identity = 22/45 (48.89%), Postives = 32/45 (71.11%), Query Frame = 3
Query:  165 LLKLWEKIRFLYMVHPEGKYVVDIDHSIDITKIAPSTRVELRTDS 299
            ++K  +K + L  VHPEGK+VVD+D +IDI  + P+ RV LR +S
Sbjct:   75 VVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNES 119          
BLAST of EY665376 vs. ExPASy Swiss-Prot
Match: PRS8_XENLA (26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.490e-20
Identity = 37/74 (50.00%), Postives = 46/74 (62.16%), Query Frame = 1
Query:  307 LHMILPSKLDPLVNLRKAGMVPDSTYDMVAALDARLDVIKEVNELPNLRPKLFESLERTQGAGVLKEGTQNKAK 528
            LH ILP+K+DPLV+L     VPDSTY+M+  LD ++  IKEV ELP   P+ FE+L   Q  GVL  G     K
Sbjct:  118 LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGK 191          

HSP 2 Score: 50.8322 bits (120), Expect = 3.490e-20
Identity = 22/45 (48.89%), Postives = 32/45 (71.11%), Query Frame = 3
Query:  165 LLKLWEKIRFLYMVHPEGKYVVDIDHSIDITKIAPSTRVELRTDS 299
            +++  +K + L  VHPEGK+VVD+D +IDI  + P+ RV LR DS
Sbjct:   71 VVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDS 115          
BLAST of EY665376 vs. ExPASy Swiss-Prot
Match: PRS8_MANSE (26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.500e-20
Identity = 38/74 (51.35%), Postives = 47/74 (63.51%), Query Frame = 1
Query:  307 LHMILPSKLDPLVNLRKAGMVPDSTYDMVAALDARLDVIKEVNELPNLRPKLFESLERTQGAGVLKEGTQNKAK 528
            LH ILP+K+DPLV+L     VPDSTY+MV  LD ++  IKEV ELP   P+LF++L   Q  GVL  G     K
Sbjct:  119 LHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 192          

HSP 2 Score: 48.9062 bits (115), Expect = 3.500e-20
Identity = 25/36 (69.44%), Postives = 30/36 (83.33%), Query Frame = 2
Query:   92 LYSRLRMLKE*LQLLQQPGSYVGEVVKVMGKNKVLV 199
            L +++RML+E LQLLQ+ GSYVGEVVK M K KVLV
Sbjct:   48 LNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLV 83          
BLAST of EY665376 vs. ExPASy Swiss-Prot
Match: PRS8_YEAST (26S protease regulatory subunit 8 homolog OS=Saccharomyces cerevisiae GN=RPT6 PE=1 SV=4)

HSP 1 Score: 67.781 bits (164), Expect = 3.960e-18
Identity = 37/75 (49.33%), Postives = 45/75 (60.00%), Query Frame = 1
Query:  304 VLHMILPSKLDPLVNLRKAGMVPDSTYDMVAALDARLDVIKEVNELPNLRPKLFESLERTQGAGVLKEGTQNKAK 528
            +LH +L +K DPLV+L     VPDSTYDMV  L  ++  IKEV ELP   P+LFESL   Q  GV+  G     K
Sbjct:  121 MLHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGK 195          

HSP 2 Score: 45.4394 bits (106), Expect = 3.960e-18
Identity = 20/36 (55.56%), Postives = 29/36 (80.56%), Query Frame = 2
Query:   92 LYSRLRMLKE*LQLLQQPGSYVGEVVKVMGKNKVLV 199
            L  ++R +K+ L+LLQ+PGSYVGEV+K++   KVLV
Sbjct:   51 LNDKVRFIKDELRLLQEPGSYVGEVIKIVSDKKVLV 86          
BLAST of EY665376 vs. ExPASy Swiss-Prot
Match: PRS8_ENCCU (26S protease regulatory subunit 8 homolog OS=Encephalitozoon cuniculi GN=RPT6 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 9.748e-16
Identity = 36/74 (48.65%), Postives = 46/74 (62.16%), Query Frame = 1
Query:  307 LHMILPSKLDPLVNLRKAGMVPDSTYDMVAALDARLDVIKEVNELPNLRPKLFESLERTQGAGVLKEGTQNKAK 528
            +H ILP+K+DPLV+L     VPDSTY M+  LD ++  I+EV ELP   P+LFE+L   Q  GVL  G     K
Sbjct:  170 VHRILPTKVDPLVSLMMVEKVPDSTYQMIGGLDEQIKEIREVIELPIKHPELFENLGIAQPKGVLLYGPPGTGK 243          

HSP 2 Score: 36.1946 bits (82), Expect = 9.748e-16
Identity = 18/36 (50.00%), Postives = 26/36 (72.22%), Query Frame = 2
Query:   92 LYSRLRMLKE*LQLLQQPGSYVGEVVKVMGKNKVLV 199
            L  R+R L+E + ++Q+P S VG VV+ MGK +VLV
Sbjct:   99 LNRRVRFLREEISIVQEPSSNVGVVVEKMGKMQVLV 134          
The following BLAST results are available for this feature:
BLAST of EY665376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
PRS8_DROME2.690e-2051.3526S protease regulatory subunit 8 OS=Drosophila me... [more]
PRS8_XENLA3.490e-2050.0026S protease regulatory subunit 8 OS=Xenopus laevi... [more]
PRS8_MANSE3.500e-2051.3526S protease regulatory subunit 8 OS=Manduca sexta... [more]
PRS8_YEAST3.960e-1849.3326S protease regulatory subunit 8 homolog OS=Sacch... [more]
PRS8_ENCCU9.748e-1648.6526S protease regulatory subunit 8 homolog OS=Encep... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-007-B10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665376 ID=EY665376; Name=EY665376; organism=Citrus sinensis; type=EST; length=1228bp
ATATTTTATTTTGCTGCGTCGGGTCGGGATTCCGGGTCGACCCCGCGTCC
GATGAACACCATCTCTGTCGCCTCGAATCCCACCCTTTTAACTCTATTCT
AGACTGCGGATGCTTAAAGAATAATTACAGCTTCTTCAACAGCCTGGATC
CTATGTCGGTGAGGTTGTTAAAGTTATGGGAAAAAATAAGGTTCTTGTAT
ATGGTTCATCCTGAGGGGAAGTATGTTGTTGATATTGATCACAGTATTGA
TATAACCAAGATCGCTCCGTCAACAAGAGTTGAACTTCGTACTGACAGCT
AGTGTTCTTCATATGATCCTGCCAAGCAAATTAGATCCCCTGGTCAACCT
TAGGAAGGCTGGAATGGTCCCTGATTCTACTTATGACATGGTTGCTGCCT
TGGATGCCCGACTTGACGTGATCAAGGAGGTCAATGAGCTTCCTAATCTA
CGTCCCAAATTGTTCGAGTCTCTAGAAAGAACTCAAGGCGCCGGTGTATT
GAAGGAAGGAACACAGAATAAGGCAAAACATTGGTGAGAAGAGTTAAGGT
CCACCAAATGAATTGACTATTCACAAAGTTTCGGGTTCGAGATAGTCCAG
AATATCTTGGCTAAAGGACCGGAAGGCTAAAAAATTTTGGTATAGGATGG
TGAATGTCCCTTCATAATTTTAGGGAGAATTGCAAGTACTATATGGATCA
ATGAATCTAGCCCATATTGATTTTATAAATACCACAATTTCCTTATCTTC
CACCACTAAAGTATTAAGTCCTATAATATTGGTATTTGATCTATCAATTA
TATTCAACTCCCTACTATGGGATGTAAACTCAACATGTAATATCATACAA
GAGTAAACTCCAAGCAATAGAAACGTAAGAAGGTTATCGCTTTAATCTTA
AATATTAACAGTAAAAGTGAAGAACGATATACCAAATGCCATCCGTTCTT
AACACTGATATTACATAGATATATGCAGTGTAAAAAATACACAACAATGT
AAAATAACTTCTACATCTATTTGATACCAGCTCTTCTCATGACTTGCATT
CTTCCTAAATCTCTTTACTAATCATCACTAAATTAAAATGATTGTTATAT
ATGTAGCTCTAATGGTTACCCTAAACTATAATACACATAAATATAAAAGA
AGTTACTGCGATTACCAAGGCAATGATCAGCGAATTCAAGACGATGTCTA
ACTGTTGCAACTAGAATAAGAGAAGTAT
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