EY665376
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665376 vs. ExPASy Swiss-Prot
Match: PRS8A_ARATH (26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana GN=RPT6A PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.676e-27 Identity = 43/75 (57.33%), Postives = 50/75 (66.67%), Query Frame = 1 Query: 304 VLHMILPSKLDPLVNLRKAGMVPDSTYDMVAALDARLDVIKEVNELPNLRPKLFESLERTQGAGVLKEGTQNKAK 528 VLH++LPSK+DPLVNL K VPDSTYDM+ LD ++ IKEV ELP P+LFESL Q GVL G K Sbjct: 134 VLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208 HSP 2 Score: 62.3882 bits (150), Expect = 1.676e-27 Identity = 31/45 (68.89%), Postives = 35/45 (77.78%), Query Frame = 3 Query: 165 LLKLWEKIRFLYMVHPEGKYVVDIDHSIDITKIAPSTRVELRTDS 299 ++K+ K + L VHPEGKYVVDID SIDITKI PSTRV LR DS Sbjct: 88 VVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDS 132
BLAST of EY665376 vs. ExPASy Swiss-Prot
Match: PRS8B_ARATH (26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana GN=RPT6B PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.840e-27 Identity = 43/75 (57.33%), Postives = 50/75 (66.67%), Query Frame = 1 Query: 304 VLHMILPSKLDPLVNLRKAGMVPDSTYDMVAALDARLDVIKEVNELPNLRPKLFESLERTQGAGVLKEGTQNKAK 528 VLH++LPSK+DPLVNL K VPDSTYDM+ LD ++ IKEV ELP P+LFESL Q GVL G K Sbjct: 134 VLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208 HSP 2 Score: 61.6178 bits (148), Expect = 2.840e-27 Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 2 Query: 92 LYSRLRMLKE*LQLLQQPGSYVGEVVKVMGKNKVLV 199 L SR+RML+E LQLLQ+PGSYVGEVVKVMGKNKVLV Sbjct: 64 LNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLV 99
BLAST of EY665376 vs. ExPASy Swiss-Prot
Match: PRS8_DICDI (26S protease regulatory subunit 8 OS=Dictyostelium discoideum GN=psmC5 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 2.878e-23 Identity = 41/74 (55.41%), Postives = 48/74 (64.86%), Query Frame = 1 Query: 307 LHMILPSKLDPLVNLRKAGMVPDSTYDMVAALDARLDVIKEVNELPNLRPKLFESLERTQGAGVLKEGTQNKAK 528 LH ILP+K+DPLV+L K +PDSTYDMV LD ++ IKEV ELP P+LFESL Q GVL G K Sbjct: 119 LHRILPNKIDPLVSLMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 192 HSP 2 Score: 53.1434 bits (126), Expect = 2.878e-23 Identity = 27/36 (75.00%), Postives = 31/36 (86.11%), Query Frame = 2 Query: 92 LYSRLRMLKE*LQLLQQPGSYVGEVVKVMGKNKVLV 199 L +R+RMLKE LQLL PGS+V EVVK+MGKNKVLV Sbjct: 48 LNNRVRMLKEELQLLTNPGSHVAEVVKLMGKNKVLV 83
BLAST of EY665376 vs. ExPASy Swiss-Prot
Match: PRS8_NAEFO (26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.074e-22 Identity = 39/74 (52.70%), Postives = 48/74 (64.86%), Query Frame = 1 Query: 307 LHMILPSKLDPLVNLRKAGMVPDSTYDMVAALDARLDVIKEVNELPNLRPKLFESLERTQGAGVLKEGTQNKAK 528 LH ILP+K+DPLV+L K VPD+TY+MV LD ++ IKEV ELP P+LFESL Q GV+ G K Sbjct: 130 LHKILPNKIDPLVSLMKVEKVPDATYEMVGGLDEQIKEIKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGK 203 HSP 2 Score: 52.373 bits (124), Expect = 3.074e-22 Identity = 28/43 (65.12%), Postives = 33/43 (76.74%), Query Frame = 2 Query: 92 LYSRLRMLKE*LQLLQQPGSYVGEVVKVMGKNKVLVYGSS*GE 220 L R+R LKE LQ LQ+PGS+VGEVVKVMGK KVL+ S G+ Sbjct: 59 LNGRVRSLKEELQQLQEPGSHVGEVVKVMGKKKVLIKISQEGK 101
BLAST of EY665376 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.270e-21 Identity = 35/71 (49.30%), Postives = 45/71 (63.38%), Query Frame = 1 Query: 316 ILPSKLDPLVNLRKAGMVPDSTYDMVAALDARLDVIKEVNELPNLRPKLFESLERTQGAGVLKEGTQNKAK 528 ILP+K+DPLV+L +PDSTY+MV L+ ++ IKEV ELP P+LFESL Q G+L G K Sbjct: 122 ILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGK 192 HSP 2 Score: 56.6102 bits (135), Expect = 4.270e-21 Identity = 26/36 (72.22%), Postives = 33/36 (91.67%), Query Frame = 2 Query: 92 LYSRLRMLKE*LQLLQQPGSYVGEVVKVMGKNKVLV 199 L +R+R+L+E +QLLQ+PGSYVGEV+K MGKNKVLV Sbjct: 48 LNARVRLLREEIQLLQEPGSYVGEVIKTMGKNKVLV 83
BLAST of EY665376 vs. ExPASy Swiss-Prot
Match: PRS8_RAT (26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.554e-21 Identity = 38/74 (51.35%), Postives = 47/74 (63.51%), Query Frame = 1 Query: 307 LHMILPSKLDPLVNLRKAGMVPDSTYDMVAALDARLDVIKEVNELPNLRPKLFESLERTQGAGVLKEGTQNKAK 528 LH ILP+K+DPLV+L VPDSTY+M+ LD ++ IKEV ELP P+LFE+L Q GVL G K Sbjct: 123 LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGK 196 HSP 2 Score: 50.8322 bits (120), Expect = 5.554e-21 Identity = 22/45 (48.89%), Postives = 32/45 (71.11%), Query Frame = 3 Query: 165 LLKLWEKIRFLYMVHPEGKYVVDIDHSIDITKIAPSTRVELRTDS 299 +++ +K + L VHPEGK+VVD+D +IDI + P+ RV LR DS Sbjct: 76 VVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDS 120
BLAST of EY665376 vs. ExPASy Swiss-Prot
Match: PRS8_PIG (26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.554e-21 Identity = 38/74 (51.35%), Postives = 47/74 (63.51%), Query Frame = 1 Query: 307 LHMILPSKLDPLVNLRKAGMVPDSTYDMVAALDARLDVIKEVNELPNLRPKLFESLERTQGAGVLKEGTQNKAK 528 LH ILP+K+DPLV+L VPDSTY+M+ LD ++ IKEV ELP P+LFE+L Q GVL G K Sbjct: 123 LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGK 196 HSP 2 Score: 50.8322 bits (120), Expect = 5.554e-21 Identity = 22/45 (48.89%), Postives = 32/45 (71.11%), Query Frame = 3 Query: 165 LLKLWEKIRFLYMVHPEGKYVVDIDHSIDITKIAPSTRVELRTDS 299 +++ +K + L VHPEGK+VVD+D +IDI + P+ RV LR DS Sbjct: 76 VVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDS 120
BLAST of EY665376 vs. ExPASy Swiss-Prot
Match: PRS8_MOUSE (26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.554e-21 Identity = 38/74 (51.35%), Postives = 47/74 (63.51%), Query Frame = 1 Query: 307 LHMILPSKLDPLVNLRKAGMVPDSTYDMVAALDARLDVIKEVNELPNLRPKLFESLERTQGAGVLKEGTQNKAK 528 LH ILP+K+DPLV+L VPDSTY+M+ LD ++ IKEV ELP P+LFE+L Q GVL G K Sbjct: 123 LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGK 196 HSP 2 Score: 50.8322 bits (120), Expect = 5.554e-21 Identity = 22/45 (48.89%), Postives = 32/45 (71.11%), Query Frame = 3 Query: 165 LLKLWEKIRFLYMVHPEGKYVVDIDHSIDITKIAPSTRVELRTDS 299 +++ +K + L VHPEGK+VVD+D +IDI + P+ RV LR DS Sbjct: 76 VVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDS 120
BLAST of EY665376 vs. ExPASy Swiss-Prot
Match: PRS8_HUMAN (26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.554e-21 Identity = 38/74 (51.35%), Postives = 47/74 (63.51%), Query Frame = 1 Query: 307 LHMILPSKLDPLVNLRKAGMVPDSTYDMVAALDARLDVIKEVNELPNLRPKLFESLERTQGAGVLKEGTQNKAK 528 LH ILP+K+DPLV+L VPDSTY+M+ LD ++ IKEV ELP P+LFE+L Q GVL G K Sbjct: 123 LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGK 196 HSP 2 Score: 50.8322 bits (120), Expect = 5.554e-21 Identity = 22/45 (48.89%), Postives = 32/45 (71.11%), Query Frame = 3 Query: 165 LLKLWEKIRFLYMVHPEGKYVVDIDHSIDITKIAPSTRVELRTDS 299 +++ +K + L VHPEGK+VVD+D +IDI + P+ RV LR DS Sbjct: 76 VVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDS 120
BLAST of EY665376 vs. ExPASy Swiss-Prot
Match: PRS8_BOVIN (26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.554e-21 Identity = 38/74 (51.35%), Postives = 47/74 (63.51%), Query Frame = 1 Query: 307 LHMILPSKLDPLVNLRKAGMVPDSTYDMVAALDARLDVIKEVNELPNLRPKLFESLERTQGAGVLKEGTQNKAK 528 LH ILP+K+DPLV+L VPDSTY+M+ LD ++ IKEV ELP P+LFE+L Q GVL G K Sbjct: 123 LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGK 196 HSP 2 Score: 50.8322 bits (120), Expect = 5.554e-21 Identity = 22/45 (48.89%), Postives = 32/45 (71.11%), Query Frame = 3 Query: 165 LLKLWEKIRFLYMVHPEGKYVVDIDHSIDITKIAPSTRVELRTDS 299 +++ +K + L VHPEGK+VVD+D +IDI + P+ RV LR DS Sbjct: 76 VVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDS 120 The following BLAST results are available for this feature:
BLAST of EY665376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665376 ID=EY665376; Name=EY665376; organism=Citrus sinensis; type=EST; length=1228bpback to top |