CV884662
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: NRAM2_ARATH (Metal transporter Nramp2 OS=Arabidopsis thaliana GN=NRAMP2 PE=2 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 8.835e-64 Identity = 124/161 (77.02%), Postives = 136/161 (84.47%), Query Frame = 2 Query: 149 ETNRLLPIPSPPS----STEDDEEVAFDSREKILIVDADSASTLNVDGDQVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIAI 619 E +RLLP P PPS ST+ + E AF++ EKILIVD +S GD PPFSW+KLWLFTGPGFLMSIAFLDPGNLEGDLQ+GAIAGYSLLWLLMWAT MGLLIQ+LSARVGVATGRHLAELCR+EYP WAR+VLW MAE+ALIGAD QEVIGSAIAI Sbjct: 12 EEDRLLP-PPPPSQSLPSTDSESEAAFETNEKILIVDFESPDDPTT-GDTPPPFSWRKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLIQMLSARVGVATGRHLAELCRDEYPTWARYVLWSMAELALIGADIQEVIGSAIAI 170
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: NRAM3_ARATH (Metal transporter Nramp3 OS=Arabidopsis thaliana GN=NRAMP3 PE=2 SV=2) HSP 1 Score: 222.631 bits (566), Expect = 1.236e-57 Identity = 109/144 (75.69%), Postives = 121/144 (84.03%), Query Frame = 2 Query: 194 EDDEEVAFDSREKILIVDADSASTLN--VDGDQVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIAI 619 E++EE A+D EK+ IV + L V PPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQ+GA+AGYSLLWLLMWAT MGLL+QLLSAR+GVATGRHLAELCR+EYP WAR VLW MAE+ALIG+D QEVIGSAIAI Sbjct: 15 EEEEETAYDETEKVHIVRNEEEDDLEHGVGCGGAPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAVAGYSLLWLLMWATAMGLLVQLLSARLGVATGRHLAELCRDEYPTWARMVLWVMAELALIGSDIQEVIGSAIAI 158
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: NRAM5_ARATH (Metal transporter Nramp5 OS=Arabidopsis thaliana GN=NRAMP5 PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.108e-57 Identity = 115/174 (66.09%), Postives = 134/174 (77.01%), Query Frame = 2 Query: 104 SSETREEESGSK--DSNETNRLLPIPSPPSSTEDDEEVAFDSREKILIVDADSASTLNVDGDQVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIAI 619 S+ +R+E S + DSN + L +P S E+DE +IL V+ D T D VPPFSW KLW FTGPGFLMSIAFLDPGN+EGDLQ+GA+AGYSLLWLL+WATLMGLL+QLLSAR+GVATGRHLAE+CR EYP+WAR +LWFMAEVALIGAD QEVIGSAIA+ Sbjct: 4 STVSRQENSPKRPNDSNGEFKRLLVPET-SQPEEDELHESPPENQILNVEEDRDKTY----DSVPPFSWAKLWKFTGPGFLMSIAFLDPGNIEGDLQAGAVAGYSLLWLLLWATLMGLLMQLLSARIGVATGRHLAEICRSEYPSWARILLWFMAEVALIGADIQEVIGSAIAL 172
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: NRAM4_ARATH (Metal transporter Nramp4 OS=Arabidopsis thaliana GN=NRAMP4 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 3.595e-57 Identity = 113/160 (70.62%), Postives = 126/160 (78.75%), Query Frame = 2 Query: 146 NETNRLLPIPSPPSSTEDDEEVAFDSREKILIVDADSASTLNVDGD--QVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIAI 619 +ET+R P+ + EE A++ EK+LIV D + D D P FSWKKLWLFTGPGFLMSIAFLDPGNLE DLQ+GAIAGYSL+WLLMWAT +GLLIQLLSAR+GVATGRHLAELCREEYP WAR VLW MAE+ALIGAD QEVIGSAIAI Sbjct: 2 SETDRERPLLA-------SEERAYEETEKVLIVGIDEEEDADYDDDPGNSPKFSWKKLWLFTGPGFLMSIAFLDPGNLESDLQAGAIAGYSLIWLLMWATAIGLLIQLLSARLGVATGRHLAELCREEYPTWARMVLWIMAEIALIGADIQEVIGSAIAI 154
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: NRAM2_MOUSE (Natural resistance-associated macrophage protein 2 OS=Mus musculus GN=Slc11a2 PE=1 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 3.058e-40 Identity = 92/183 (50.27%), Postives = 119/183 (65.03%), Query Frame = 2 Query: 98 MDSSETREEESGSKDSNETNRLLPI------PSPPSSTEDDEE---VAFDSREKILIVDADSASTLNVDGDQVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIAI 619 +D E ++ S D ++ L I S P ST D EE FD EKI I + + + FS++KLW FTGPGFLMSIA+LDPGN+E DLQSGA+AG+ LLW+L+ AT++GLL+Q L+AR+GV TG HLAE+C +YP R +LW M E+A+IG+D QEVIGSAIAI Sbjct: 3 LDPKEKMPDDGASGDHGDSASLGAINPAYSNSSLPHSTGDSEEPFTTYFD--EKIPIPEEEYSC-----------FSFRKLWAFTGPGFLMSIAYLDPGNIESDLQSGAVAGFKLLWVLLLATIVGLLLQRLAARLGVVTGLHLAEVCHRQYPKVPRIILWLMVELAIIGSDMQEVIGSAIAI 172
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: MVL_DROME (Protein Malvolio OS=Drosophila melanogaster GN=Mvl PE=2 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 3.994e-40 Identity = 79/136 (58.09%), Postives = 103/136 (75.74%), Query Frame = 2 Query: 212 AFDSREKILIVDADSASTLNVDGDQVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIAI 619 A+ S EK+LI D DS + FS++KLW FTGPGFLMSIA+LDPGN+E D+QSGA A Y +LW+L+WAT++GLL+Q L+AR+GV TG HLAE+C +Y R++LW M E+A+IG+D QEVIG+AIAI Sbjct: 53 AYFSDEKVLIPDDDSTNV---------GFSFRKLWAFTGPGFLMSIAYLDPGNIESDMQSGAAAKYKILWVLLWATVLGLLMQRLAARLGVVTGLHLAEMCYRQYKRLPRWILWIMIEIAIIGSDMQEVIGTAIAI 179
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: NRAM2_RAT (Natural resistance-associated macrophage protein 2 OS=Rattus norvegicus GN=Slc11a2 PE=1 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 5.216e-40 Identity = 92/183 (50.27%), Postives = 119/183 (65.03%), Query Frame = 2 Query: 98 MDSSETREEESGSKDSNETNRLLPI------PSPPSSTEDDEE---VAFDSREKILIVDADSASTLNVDGDQVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIAI 619 +D E ++ S D ++ L I S P ST D EE FD EKI I + + + FS++KLW FTGPGFLMSIA+LDPGN+E DLQSGA+AG+ LLW+L+ AT++GLL+Q L+AR+GV TG HLAE+C +YP R +LW M E+A+IG+D QEVIGSAIAI Sbjct: 3 LDPEEKIPDDGASGDHGDSASLGAINPAYSNSSLPHSTGDSEEPFTTYFD--EKIPIPEEEYSC-----------FSFRKLWAFTGPGFLMSIAYLDPGNIESDLQSGAVAGFKLLWVLLLATIVGLLLQRLAARLGVVTGLHLAEVCHRQYPKVPRIILWLMVELAIIGSDMQEVIGSAIAI 172
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: NRAM2_HUMAN (Natural resistance-associated macrophage protein 2 OS=Homo sapiens GN=SLC11A2 PE=1 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 5.216e-40 Identity = 89/176 (50.57%), Postives = 111/176 (63.07%), Query Frame = 2 Query: 95 KMDSSETREEESGSKDSNETNRLLPIPSPPSSTEDDEEV-AFDSREKILIVDADSASTLNVDGDQVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIAI 619 KM + S N PS S D EE A EKI I + + + FS++KLW FTGPGFLMSIA+LDPGN+E DLQSGA+AG+ LLW+L+ ATL+GLL+Q L+AR+GV TG HLAE+C +YP R +LW M E+A+IG+D QEVIGSAIAI Sbjct: 8 KMSDDSVSGDHGESASLGNINPAYSNPSLSQSPGDSEEYFATYFNEKISIPEEEYSC-----------FSFRKLWAFTGPGFLMSIAYLDPGNIESDLQSGAVAGFKLLWILLLATLVGLLLQRLAARLGVVTGLHLAEVCHRQYPKVPRVILWLMVELAIIGSDMQEVIGSAIAI 172
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: NRAM1_DICDI (Metal transporter nramp1 homolog OS=Dictyostelium discoideum GN=nramp1 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.191e-38 Identity = 70/117 (59.83%), Postives = 94/117 (80.34%), Query Frame = 2 Query: 269 NVDGDQVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIAI 619 N+D ++K LW FTGPGFLMSIA+LDPGNLE D+Q+GA+AGY LLW+L W+T++G +Q+L++R+GV TG+HLAE CRE+YP R +LW M E+A+IG+D QEVIG+AIA+ Sbjct: 60 NIDKPDSKWINFKTLWAFTGPGFLMSIAYLDPGNLESDIQAGAMAGYQLLWVLFWSTVIGFWLQMLASRLGVVTGKHLAEHCREQYPKTPRLLLWLMTELAIIGSDIQEVIGTAIAL 176
BLAST of CV884662 vs. ExPASy Swiss-Prot
Match: NRAM1_CHICK (Natural resistance-associated macrophage protein 1 OS=Gallus gallus GN=SLC11A1 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.164e-37 Identity = 70/117 (59.83%), Postives = 92/117 (78.63%), Query Frame = 2 Query: 266 LNVDGDQVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADFQEVIGSAIA 616 +++ P FS++KLW FTGPGFLMSIA+LDPGN+E DLQ GA+AG+ LLW+L+WAT++GLL Q L+ R+GV TG+ LAE+C YP R +LW M E+A+IG+D QEVIG+AIA Sbjct: 48 ISIPKGSTPGFSFRKLWAFTGPGFLMSIAYLDPGNVESDLQCGAVAGFKLLWVLLWATVLGLLCQRLAIRLGVVTGKDLAEICYLYYPRVPRVLLWLMMEIAIIGSDMQEVIGTAIA 164 The following BLAST results are available for this feature:
BLAST of CV884662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884662 ID=CV884662; Name=CV884662; organism=Citrus sinensis; type=EST; length=619bpback to top |