CV884244
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884244 vs. ExPASy Swiss-Prot
Match: RL27_PEA (60S ribosomal protein L27 OS=Pisum sativum GN=RPL27 PE=2 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 6.772e-65 Identity = 122/135 (90.37%), Postives = 127/135 (94.07%), Query Frame = 2 Query: 47 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 451 MVKFLKPNKAVILLQGRYAG+KAVIVK+FDDGTRE+ YGHCLVAGIKK+P KVI+KDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKD V D LQSKDKKVTA KETKK LEERFKTGKNRWFFTKLRF Sbjct: 1 MVKFLKPNKAVILLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKFPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKSLEERFKTGKNRWFFTKLRF 135
BLAST of CV884244 vs. ExPASy Swiss-Prot
Match: RL273_ARATH (60S ribosomal protein L27-3 OS=Arabidopsis thaliana GN=RPL27C PE=2 SV=2) HSP 1 Score: 238.039 bits (606), Expect = 2.409e-62 Identity = 115/135 (85.19%), Postives = 124/135 (91.85%), Query Frame = 2 Query: 47 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 451 MVKFLK NKAVILLQGRYAG+KAVI+KSFDDG R+R YGHCLVAG+KKYP KVIRKDSAKKTAKKSRVK F+KLVNYQHLMPTRYTLDVDLK+V + D+LQSKDKKV A KE K +LEERFKTGKNRWFFTKLRF Sbjct: 1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEERFKTGKNRWFFTKLRF 135
BLAST of CV884244 vs. ExPASy Swiss-Prot
Match: RL272_ARATH (60S ribosomal protein L27-2 OS=Arabidopsis thaliana GN=RPL27B PE=2 SV=2) HSP 1 Score: 238.039 bits (606), Expect = 2.409e-62 Identity = 115/135 (85.19%), Postives = 125/135 (92.59%), Query Frame = 2 Query: 47 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 451 MVKFLK NKAVILLQGRYAG+KAVI+KSFDDGT +R YGHCLVAG+KKYP KVIRKDSAKKTAKKSRVK F+KLVNYQHLMPTRYTLDVDLK+V + D+L+SKDKKVTA KE K +LEERFKTGKNRWFFTKLRF Sbjct: 1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVNYQHLMPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEERFKTGKNRWFFTKLRF 135
BLAST of CV884244 vs. ExPASy Swiss-Prot
Match: RL271_ARATH (60S ribosomal protein L27-1 OS=Arabidopsis thaliana GN=RPL27A PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.119e-59 Identity = 110/135 (81.48%), Postives = 122/135 (90.37%), Query Frame = 2 Query: 47 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 451 MVK +KP KAVILLQGRY G+KAVIVKSFDDGT E+ YGHCLVAG+KKYP KVIRKDSAKKTAKKSRVK F K++NYQH+MPTRYTLD+DLK+VVSAD++ SKDKKVTA KE K + EERFKTGKNRWFFTKLRF Sbjct: 1 MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFFKVINYQHVMPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEERFKTGKNRWFFTKLRF 135
BLAST of CV884244 vs. ExPASy Swiss-Prot
Match: RL27_SOLTU (60S ribosomal protein L27 OS=Solanum tuberosum GN=RPL27 PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 1.975e-56 Identity = 110/139 (79.14%), Postives = 122/139 (87.77%), Query Frame = 2 Query: 47 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL----KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 451 M KFLKPNKAVILLQG+YAGRKAVIV++FD+GTR+R YGHCLVAGI +YP KVIRKDSAKK KKSRVKAF+KLVNY H+MPTRYTLD DL KDVV+AD LQ++DKKVTA + TK RL ERFKTGKNRWFFTKLRF Sbjct: 1 MEKFLKPNKAVILLQGKYAGRKAVIVRAFDEGTRDRPYGHCLVAGISRYPKKVIRKDSAKKAGKKSRVKAFIKLVNYNHIMPTRYTLDEDLKDVVKDVVNADVLQARDKKVTA-RRTKARLAERFKTGKNRWFFTKLRF 138
BLAST of CV884244 vs. ExPASy Swiss-Prot
Match: RL27_PYRST (60S ribosomal protein L27 OS=Pyrobotrys stellata GN=RPL27 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 1.734e-44 Identity = 88/135 (65.19%), Postives = 106/135 (78.52%), Query Frame = 2 Query: 47 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 451 MVKFLK K V++L GR+AG+KAVIV++FDDGT R YGH LV G++K P KV ++ S KK AKKS +K F+K VNY HLMPTRYTLDVD K V+A++ ++ KKV A KE KK LEE+FKTGKNRWFFTKLRF Sbjct: 1 MVKFLKSGKVVVVLSGRFAGKKAVIVRNFDDGTSSRPYGHALVVGLQKEPRKVTKRQSQKKQAKKSTLKTFIKTVNYNHLMPTRYTLDVDFKG-VAAEAQENPTKKVEARKECKKLLEEKFKTGKNRWFFTKLRF 134
BLAST of CV884244 vs. ExPASy Swiss-Prot
Match: RL27_HIPCM (60S ribosomal protein L27 OS=Hippocampus comes GN=rpl27 PE=2 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 3.742e-39 Identity = 80/136 (58.82%), Postives = 99/136 (72.79%), Query Frame = 2 Query: 47 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 451 M KF+KP K V++L GRYAGRKAVIVK+ DDGT +R Y H LVAGI +YP KV KK AK+S++KAFVK+ NY HLMPTRY++D+ L K VV+ D + K A +E K + EER+KTGKN+WFF KLRF Sbjct: 1 MGKFMKPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVAGIDRYPRKVTAPMGKKKIAKRSKIKAFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKSKARREAKVKFEERYKTGKNKWFFQKLRF 136
BLAST of CV884244 vs. ExPASy Swiss-Prot
Match: RL27_DANRE (60S ribosomal protein L27 OS=Danio rerio GN=rpl27 PE=2 SV=3) HSP 1 Score: 160.614 bits (405), Expect = 4.887e-39 Identity = 80/136 (58.82%), Postives = 99/136 (72.79%), Query Frame = 2 Query: 47 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 451 M KF+KP K V++L GRYAGRKAVIVK+ DDGT +R Y H LVAGI +YP KV KK AK+S++KAFVK+ NY HLMPTRY++D+ L K VV+ D + K A +E K + EER+KTGKN+WFF KLRF Sbjct: 1 MGKFMKPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVAGIDRYPRKVTATMGKKKIAKRSKIKAFVKVFNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
BLAST of CV884244 vs. ExPASy Swiss-Prot
Match: RL27_ICTPU (60S ribosomal protein L27 OS=Ictalurus punctatus GN=rpl27 PE=2 SV=3) HSP 1 Score: 159.458 bits (402), Expect = 1.089e-38 Identity = 78/136 (57.35%), Postives = 99/136 (72.79%), Query Frame = 2 Query: 47 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 451 M KF+KP K V++L GRYAGRKAVIVK+ DDGT +R Y H LV+GI +YP KV KK AK+S++KAFVK+ NY HLMPTRY++D+ L K +V+ D + K A +E K + EER+KTGKN+WFF KLRF Sbjct: 1 MGKFMKPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVSGIDRYPRKVTATMGKKKVAKRSKIKAFVKVFNYNHLMPTRYSVDIPLDKTIVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136
BLAST of CV884244 vs. ExPASy Swiss-Prot
Match: RL27_RAT (60S ribosomal protein L27 OS=Rattus norvegicus GN=Rpl27 PE=2 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 1.857e-38 Identity = 78/136 (57.35%), Postives = 99/136 (72.79%), Query Frame = 2 Query: 47 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDL-KDVVSADSLQSKDKKVTACKETKKRLEERFKTGKNRWFFTKLRF 451 M KF+KP K V++L GRY+GRKAVIVK+ DDGT +R Y H LVAGI +YP KV KK AK+S++K+FVK+ NY HLMPTRY++D+ L K VV+ D + K A +E K + EER+KTGKN+WFF KLRF Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 136 The following BLAST results are available for this feature:
BLAST of CV884244 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884244 ID=CV884244; Name=CV884244; organism=Citrus sinensis; type=EST; length=568bpback to top |