CV884240
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MYBA_DICDI (Myb-like protein A OS=Dictyostelium discoideum GN=mybA PE=4 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 4.428e-27 Identity = 53/101 (52.48%), Postives = 71/101 (70.30%), Query Frame = 1 Query: 172 IKGPWSPEEDEALQRLVQNYGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKR 474 +KG W+ +ED+ + LV+ YGP+ WS I+ + GR GK CR RW N L+P ++ ++ EED+ I HA GNKWA IA+ L GRTDNAIKNHWNS++KR Sbjct: 200 VKGAWTKDEDDKVIELVKTYGPKKWSDIALHLKGRMGKQCRERWHNHLNPNIKKEAWSDEEDQIIRDQHAIHGNKWAEIAKFLPGRTDNAIKNHWNSSMKR 300
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MYB40_ANTMA (Myb-related protein 340 OS=Antirrhinum majus GN=MYB340 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.430e-25 Identity = 60/141 (42.55%), Postives = 84/141 (59.57%), Query Frame = 1 Query: 160 DVDRIKGPWSPEEDEALQRLVQNYGPRNWSLISKSIP-GRSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSMSDESQVDAINPLPLKRANSVGPSNNISGLC 579 DV+ KGPW+ EED L + N+G W+ I++S R+GKSCRLRW N L P V TPEE I+ HA++GN+W+ IA+ L GRTDN IKN+WN T +K ++ S + INP + +N ++ +S C Sbjct: 10 DVEVRKGPWTMEEDLILINFISNHGEGVWNTIARSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWNRTRIQKHIKQAEASFIGHINP---EHSNEQASTSLLSSSC 147
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: LAF1_ARATH (Transcription factor LAF1 OS=Arabidopsis thaliana GN=LAF1 PE=1 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 2.430e-25 Identity = 59/128 (46.09%), Postives = 78/128 (60.94%), Query Frame = 1 Query: 142 MASTKKDVDRIKGPWSPEEDEALQRLVQNYGPRNWSLIS-KSIPGRSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSMSDESQVDAINP 522 MA TK KG WSPEEDE L+ + +YG W+ + K+ R+GKSCRLRW N L P ++ + EE+ETIL H+ GNKW+ IA+ L GRTDN IKN+W+S LK+K +I+P Sbjct: 1 MAKTKYGERHRKGLWSPEEDEKLRSFILSYGHSCWTTVPIKAGLQRNGKSCRLRWINYLRPGLKRDMISAEEEETILTFHSSLGNKWSQIAKFLPGRTDNEIKNYWHSHLKKKWLKSQSLQDAKSISP 128
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MYB46_ARATH (Transcription factor MYB46 OS=Arabidopsis thaliana GN=MYB46 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.174e-25 Identity = 57/122 (46.72%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 145 ASTKKDVDRIKGPWSPEEDEALQRLVQNYGPRNWSLISKSIP-GRSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSMSDESQV 507 AST + KG WSPEED L + + + G WS ++K+ R GKSCRLRW N L P ++ F+P+E++ I+R H+ GN+W+ IA L GRTDN IKN WNST+K++ MSD S + Sbjct: 10 ASTHQVKKMKKGLWSPEEDSKLMQYMLSNGQGCWSDVAKNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEDLIIRFHSILGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKKMSDTSNL 131
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MYB1_MAIZE (Myb-related protein Zm1 OS=Zea mays PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.021e-23 Identity = 61/140 (43.57%), Postives = 78/140 (55.71%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNWSLISKSIPG-RSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSMSDE----SQVDAINP--LPLKRANSVGPSNNISG 573 +G W+P+ED L +Q +G NW + K R GKSCRLRW N L P ++ FT EE+E I+R H GNKW+ IA L GRTDN IKN WN+ LK+K + + DA P PL A S ++N SG Sbjct: 16 RGSWTPQEDMRLIAYIQKHGHTNWRALPKQAGLLRCGKSCRLRWINYLRPDLKRGNFTDEEEEAIIRLHGLLGNKWSKIAACLPGRTDNEIKNVWNTHLKKKVAQREKKKAGAGSGDAGTPATAPLSSATSSTTTHNSSG 155
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MYB39_ARATH (Transcription factor MYB39 OS=Arabidopsis thaliana GN=MYB39 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.741e-23 Identity = 57/133 (42.86%), Postives = 75/133 (56.39%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNWSLISKSIP-GRSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSMSDESQVDAINPLPLKRANSVGPSNNIS 570 KGPW PEED+ L + G NW + K R GKSCRLRW N L P + F+ E+ TI+R HA GNKW+ IA L GRTDN IKN+WN+ +++K M +D + P R N + P ++S Sbjct: 15 KGPWLPEEDDKLTAYINENGYGNWRSLPKLAGLNRCGKSCRLRWMNYLRPDIRRGKFSDGEESTIVRLHALLGNKWSKIAGHLPGRTDNEIKNYWNTHMRKKLLQMG----IDPVTHEP--RTNDLSPILDVS 141
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: RAX1_ARATH (Transcription factor RAX1 OS=Arabidopsis thaliana GN=RAX1 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.970e-23 Identity = 55/116 (47.41%), Postives = 72/116 (62.07%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPR-NW-SLISKSIPGRSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSMSDESQVDAI 516 +GPWSPEED L+ ++ YG NW S K+ R GKSCRLRW N L P ++H F+ EED I A G++W+ IA L GRTDN IKN+WN+ L++K S S +S A+ Sbjct: 14 RGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKLRKKLLSSSSDSSSSAM 129
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MYBA1_ORYSJ (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica GN=MYBAS1 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.970e-23 Identity = 49/102 (48.04%), Postives = 70/102 (68.63%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNWSLISK-SIPGRSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRK 477 KGPW+ +ED L V+ +G R W ++K S R+GKSCRLRW N L P ++H +P+E+ I+ HAR+GN+W+ IAR L GRTDN IKN+W + +++K Sbjct: 10 KGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKHGRMSPKEEHLIIELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKK 111
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MYB48_ARATH (Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.970e-23 Identity = 49/102 (48.04%), Postives = 68/102 (66.67%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNWSLISK-SIPGRSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRK 477 KGPW+ +ED L V +G R W I+K S R+GKSCRLRW N L P ++ TP+E+ +L HA++GN+W+ IAR L GRTDN IKN+W + +++K Sbjct: 9 KGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKK 110
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MYB59_ARATH (Transcription factor MYB59 OS=Arabidopsis thaliana GN=MYB59 PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 3.879e-23 Identity = 48/102 (47.06%), Postives = 68/102 (66.67%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNWSLISK-SIPGRSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRK 477 KGPW+ +ED L V +G R W ++K S R+GKSCRLRW N L P ++ TP+E+ +L HA++GN+W+ IAR L GRTDN IKN+W + +++K Sbjct: 10 KGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKK 111 The following BLAST results are available for this feature:
BLAST of CV884240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884240 ID=CV884240; Name=CV884240; organism=Citrus sinensis; type=EST; length=773bpback to top |