CV884240
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MYBA2_ORYSJ (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica GN=MYBAS2 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.617e-23 Identity = 54/119 (45.38%), Postives = 75/119 (63.03%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNWSLISK-SIPGRSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKC----SSMSDESQVDAI 516 KGPW+ +ED L V+ +G R W I+K S R+GKSCRLRW N L P ++ +P E+ IL HAR+GN+W+ IAR L GRTDN IKN+W + +++K S+MS S ++ Sbjct: 10 KGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERKSNMSPSSSSSSL 128
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MYB4_ORYSJ (Myb-related protein Myb4 OS=Oryza sativa subsp. japonica GN=MYB4 PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 6.617e-23 Identity = 51/114 (44.74%), Postives = 70/114 (61.40%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNWSLISKSIPG-RSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSMSDESQVDA 513 KGPW+PEED+ L +Q +G NW + K R GKSCRLRW N L P ++ F+ EE++TI+ H GN+W+ IA L GRTDN IKN W++ LK++ + + V A Sbjct: 14 KGPWTPEEDKVLVAHIQRHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFSKEEEDTIIHLHELLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLDAPAQGGHVAA 127
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: GAM1_ORYSJ (Transcription factor GAMYB OS=Oryza sativa subsp. japonica GN=GAM1 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.642e-23 Identity = 49/101 (48.51%), Postives = 66/101 (65.35%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNWSLISKSIP-GRSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKR 474 KGPW+ ED L V+ +G NW+ + K+ R GKSCRLRW N L P ++ FT EE+ I++ H++ GNKWA +A L GRTDN IKN+WN+ +KR Sbjct: 42 KGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKR 142
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: GAM1_ORYSI (Transcription factor GAMYB OS=Oryza sativa subsp. indica GN=GAM1 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.642e-23 Identity = 49/101 (48.51%), Postives = 66/101 (65.35%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNWSLISKSIP-GRSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKR 474 KGPW+ ED L V+ +G NW+ + K+ R GKSCRLRW N L P ++ FT EE+ I++ H++ GNKWA +A L GRTDN IKN+WN+ +KR Sbjct: 42 KGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKR 142
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MYB6_ARATH (Transcription repressor MYB6 OS=Arabidopsis thaliana GN=MYB6 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.474e-22 Identity = 52/111 (46.85%), Postives = 70/111 (63.06%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNWSLISKSIPG-RSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSMSDESQ 504 KG W+ EED+ L ++N+G W + KS R GKSCRLRW N L P ++ FT +ED+ I++ H+ GNKW+ IA L GRTDN IKN+WN+ +KRK S + Q Sbjct: 14 KGAWTKEEDQRLVDYIRNHGEGCWRSLPKSAGLLRCGKSCRLRWINYLRPDLKRGNFTDDEDQIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSHGIDPQ 124
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MYB05_ANTMA (Myb-related protein 305 OS=Antirrhinum majus GN=MYB305 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.474e-22 Identity = 53/122 (43.44%), Postives = 74/122 (60.66%), Query Frame = 1 Query: 157 KDVDRIKGPWSPEEDEALQRLVQNYGPRNWSLISKSIP-GRSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSMSDESQVDAIN 519 +DV+ KGPW+ EED L + N+G W+ +++S R+GKSCRLRW N L P V TPEE I+ HA++GN+W+ IA+ L GRTDN IKN+W + + +K D+S N Sbjct: 9 QDVEVRKGPWTMEEDLILINYIANHGEGVWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKTLPGRTDNEIKNYWRTRI-QKHMEQGDQSSSTTFN 129
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MYB30_ANTMA (Myb-related protein 330 OS=Antirrhinum majus GN=MYB330 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.515e-22 Identity = 52/111 (46.85%), Postives = 69/111 (62.16%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNWSLISKSIPG-RSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSMSDESQ 504 KG W+ EED+ L ++ +G W + K+ R GKSCRLRW N L P ++ FT EEDE I++ H+ GNKW+ IA L GRTDN IKN+WN+ +KRK S + Q Sbjct: 14 KGAWTKEEDQRLINYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDEIIIKLHSLLGNKWSLIAGALPGRTDNEIKNYWNTHIKRKLVSRGIDPQ 124
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MYB1_HORVU (Myb-related protein Hv1 OS=Hordeum vulgare GN=MYB1 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.515e-22 Identity = 55/133 (41.35%), Postives = 80/133 (60.15%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNWSLISKSIPG-RSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSMSDESQVDAINPLPLKRANSVGPSNNIS 570 KG W+ EED+ L ++ +G W + K+ R GKSCRLRW N L P ++ F+ EEDE I++ H+ GNKW+ IA L GRTDN IKN+WN+ ++RK +S I+P+ + NS ++NI+ Sbjct: 14 KGAWTKEEDDRLTAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFSHEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLTSR-------GIDPVTHRAINSDHAASNIT 139
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MYB06_ANTMA (Myb-related protein 306 OS=Antirrhinum majus GN=MYB306 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.515e-22 Identity = 51/110 (46.36%), Postives = 67/110 (60.91%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNWSLISKSIPGRSG-----KSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSM 489 KGPW+PEED L +Q +GP NW ++IP +G KSCRLRW N L P ++ FT E++ I+ A GN+WA IA L RTDN IKN+WN+ LK+K + Sbjct: 14 KGPWTPEEDIILVSYIQEHGPGNW----RAIPSNTGLLRCSKSCRLRWTNYLRPGIKRGDFTEHEEKMIIHLQALLGNRWAAIASYLPHRTDNDIKNYWNTHLKKKLEKL 119
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: WER_ARATH (Transcription factor WER OS=Arabidopsis thaliana GN=WER PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.284e-22 Identity = 54/141 (38.30%), Postives = 79/141 (56.03%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNWSLISKSIP-GRSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKC---SSMSDESQVDAINPLPLKRANSVGPSNNISGLCLN 585 KG W+ EED+ L V+ +G +W+ I+K R GKSCRLRW N LSP V+ FT +E++ I+R H GN+W+ IA+ + GRTDN +KN+WN+ L +K + +S D + + L IS + N Sbjct: 18 KGLWTVEEDKILMDYVKAHGKGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVKRGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKLGIKDQKTKQSNGDIVYQINLPNPTETSEETKISNIVDN 158 The following BLAST results are available for this feature:
BLAST of CV884240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884240 ID=CV884240; Name=CV884240; organism=Citrus sinensis; type=EST; length=773bpback to top |