CV884240
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MYB86_ARATH (Transcription factor MYB86 OS=Arabidopsis thaliana GN=MYB86 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.284e-22 Identity = 52/103 (50.49%), Postives = 65/103 (63.11%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNWSLISKSIPG--RSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRK 477 KG WSPEEDE L + +G WS + K + G R GKSCRLRW N L P ++ F+ +E+ I+ HA GN+W+ IA L GRTDN IKN WNS LK+K Sbjct: 14 KGLWSPEEDEKLLNYITRHGHGCWSSVPK-LAGLQRCGKSCRLRWINYLRPDLKRGAFSQDEESLIIELHAALGNRWSQIATRLPGRTDNEIKNFWNSCLKKK 115
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MYB82_ARATH (Transcription factor MYB82 OS=Arabidopsis thaliana GN=MYB82 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.284e-22 Identity = 50/119 (42.02%), Postives = 71/119 (59.66%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNWSLISK-SIPGRSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSMSDESQVDAINPLP 528 +G W PEED L+ V+ +G NW+ IS+ S R GKSCRLRW N L P ++ +P+E + I+R H GN+W+ IA L GRTDN +KN+WN+ L +K +S + + P Sbjct: 14 RGLWKPEEDMILKSYVETHGEGNWADISRRSGLKRGGKSCRLRWKNYLRPNIKRGSMSPQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKKPNSRRQNAPESIVGATP 132
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MYB23_ARATH (Transcription factor MYB23 OS=Arabidopsis thaliana GN=MYB23 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.289e-22 Identity = 50/113 (44.25%), Postives = 71/113 (62.83%), Query Frame = 1 Query: 142 MASTKKDVDRIKGPWSPEEDEALQRLVQNYGPRNWSLISKSIP-GRSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRK 477 M K+ + KG W+ EED+ L V+ +G +W+ I+K R GKSCRLRW N LSP V FT +E++ I+R H GN+W+ IA+ + GRTDN +KN+WN+ L +K Sbjct: 3 MTRDGKEHEYKKGLWTVEEDKILMDYVRTHGQGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVNRGNFTDQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKK 115
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MYB3_ARATH (Transcription factor MYB3 OS=Arabidopsis thaliana GN=MYB3 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.602e-22 Identity = 50/105 (47.62%), Postives = 67/105 (63.81%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNWSLISKSIP-GRSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSS 486 KG W+ EED+ L ++ +G W + ++ R GKSCRLRW N L P ++ FT EEDE I++ H+ GNKW+ IA L GRTDN IKN+WN+ +KRK S Sbjct: 14 KGAWTKEEDQLLVDYIRKHGEGCWRSLPRAAGLQRCGKSCRLRWMNYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLS 118
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: RAX2_ARATH (Transcription factor RAX2 OS=Arabidopsis thaliana GN=RAX2 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.316e-22 Identity = 52/103 (50.49%), Postives = 65/103 (63.11%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPR-NW-SLISKSIPGRSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRK 477 +GPWSPEED L+ ++ G NW +L K+ R GKSCRLRW N L P + H FT EED I A G++W+ IA L GRTDN IKN+WN+ LK+K Sbjct: 14 RGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLNYLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLKKK 116
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MYB4_ARATH (Transcription repressor MYB4 OS=Arabidopsis thaliana GN=MYB4 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 7.316e-22 Identity = 50/102 (49.02%), Postives = 66/102 (64.71%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNWSLISKSIPG-RSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRK 477 KG W+ EEDE L ++ +G W + K+ R GKSCRLRW N L P ++ FT EEDE I++ H+ GNKW+ IA L GRTDN IKN+WN+ ++RK Sbjct: 14 KGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRK 115
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: GL1_ARATH (Trichome differentiation protein GL1 OS=Arabidopsis thaliana GN=GL1 PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 7.316e-22 Identity = 49/109 (44.95%), Postives = 70/109 (64.22%), Query Frame = 1 Query: 154 KKDVDRIKGPWSPEEDEALQRLVQNYGPRNWS-LISKSIPGRSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRK 477 K++ + KG W+ EED L V N+G W+ ++ K+ R GKSCRLRW N LSP V FT +E++ I+R H GN+W+ IA+ + GRTDN +KN+WN+ L +K Sbjct: 9 KENQEYKKGLWTVEEDNILMDYVLNHGTGQWNRIVRKTGLKRCGKSCRLRWMNYLSPNVNKGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKK 117
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: GL1_ARALY (Trichome differentiation protein GL1 OS=Arabidopsis lyrata GN=GL1 PE=3 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 7.316e-22 Identity = 49/109 (44.95%), Postives = 70/109 (64.22%), Query Frame = 1 Query: 154 KKDVDRIKGPWSPEEDEALQRLVQNYGPRNWS-LISKSIPGRSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRK 477 K++ + KG W+ EED L V N+G W+ ++ K+ R GKSCRLRW N LSP V FT +E++ I+R H GN+W+ IA+ + GRTDN +KN+WN+ L +K Sbjct: 9 KENQEYKKGLWTVEEDNILMDYVLNHGTGQWNRIVRKTGLKRCGKSCRLRWMNYLSPNVNKGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKK 117
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: RAX3_ARATH (Transcription factor RAX3 OS=Arabidopsis thaliana GN=RAX3 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.555e-22 Identity = 50/103 (48.54%), Postives = 66/103 (64.08%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPR-NWSLISKSIP-GRSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRK 477 KGPWSPEED L+ ++N G NW + + I R GKSCRLRW N L P ++H F+ EE+ I + G++W+ IA L GRTDN IKN+WN+ LK+K Sbjct: 14 KGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKK 116
BLAST of CV884240 vs. ExPASy Swiss-Prot
Match: MYB5_ARATH (Transcription repressor MYB5 OS=Arabidopsis thaliana GN=MYB5 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.248e-21 Identity = 55/134 (41.04%), Postives = 74/134 (55.22%), Query Frame = 1 Query: 175 KGPWSPEEDEALQRLVQNYGPRNW-SLISKSIPGRSGKSCRLRWCNQLSPQVEHRPFTPEEDETILRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSSMSDESQVDAINPLPLKRANSVGPSNNISG 573 +GPW+ EEDE L ++ G W SL ++ R GKSCRLRW N L P V+ T +E++ ILR H GN+W+ IA + GRTDN IKN+WN+ L++K +D PL N P +SG Sbjct: 25 RGPWTVEEDEILVSFIKKEGEGRWRSLPKRAGLLRCGKSCRLRWMNYLRPSVKRGGITSDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLRKKLLRQG----IDPQTHKPLDANNIHKPEEEVSG 154 The following BLAST results are available for this feature:
BLAST of CV884240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CV884240 ID=CV884240; Name=CV884240; organism=Citrus sinensis; type=EST; length=773bpback to top |